RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 EPG5Q9HCE0 2579 aa4.88□□□□□ -1.63
SPEN-202ENST00000438066 IGHV4-30-2A0A087WSY4 118 aa4.88□□□□□ -1.63
SPEN-202ENST00000438066 RAB19A4D1S5 217 aa4.88□□□□□ -1.63
SPEN-202ENST00000438066 ZNF705EA8MWA4 302 aaPredicted RBP4.88□□□□□ -1.63
SPEN-202ENST00000438066 KRBOX1C9JBD0 128 aa4.88□□□□□ -1.63
SPEN-202ENST00000438066 H3BP45 60 aa4.88□□□□□ -1.63
SPEN-202ENST00000438066 NDUFA2O43678 99 aa4.88□□□□□ -1.63
SPEN-202ENST00000438066 ZG16O60844 167 aa4.88□□□□□ -1.63
SPEN-202ENST00000438066 MED6O75586 246 aa4.88□□□□□ -1.63
SPEN-202ENST00000438066 HPRT1P00492 218 aa4.88□□□□□ -1.63
SPEN-202ENST00000438066 NFYBP25208 207 aa4.88□□□□□ -1.63
SPEN-202ENST00000438066 KIR2DS2P43631 304 aa4.88□□□□□ -1.63
SPEN-202ENST00000438066 UQCRFS1P47985 274 aa4.88□□□□□ -1.63
SPEN-202ENST00000438066 DYNLT3P51808 116 aa4.88□□□□□ -1.63
SPEN-202ENST00000438066 DLX6P56179 175 aa4.88□□□□□ -1.63
SPEN-202ENST00000438066 UBE2KP61086 200 aa4.88□□□□□ -1.63
SPEN-202ENST00000438066 CLINT1Q14677 625 aa4.88□□□□□ -1.63
SPEN-202ENST00000438066 LRRC10Q5BKY1 277 aa4.88□□□□□ -1.63
SPEN-202ENST00000438066 STX12Q86Y82 276 aa4.88□□□□□ -1.63
SPEN-202ENST00000438066 ITLN2Q8WWU7 325 aaPredicted RBP4.88□□□□□ -1.63
SPEN-202ENST00000438066 MARC2Q969Z3 335 aa4.88□□□□□ -1.63
SPEN-202ENST00000438066 LINC00052Q96N35 136 aa4.88□□□□□ -1.63
SPEN-202ENST00000438066 ZNF714Q96N38 554 aa4.88□□□□□ -1.63
SPEN-202ENST00000438066 CLCC1Q96S66 551 aa4.88□□□□□ -1.63
SPEN-202ENST00000438066 TSNAXQ99598 290 aaKnown RBP4.88□□□□□ -1.63
SPEN-202ENST00000438066 ATP5SQ99766 215 aa4.88□□□□□ -1.63
SPEN-202ENST00000438066 PARP11Q9NR21 331 aa4.88□□□□□ -1.63
SPEN-202ENST00000438066 MMP26Q9NRE1 261 aa4.88□□□□□ -1.63
SPEN-202ENST00000438066 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.88□□□□□ -1.63
SPEN-202ENST00000438066 SPTAN1Q13813 2472 aaKnown RBP4.88□□□□□ -1.63
SPEN-202ENST00000438066 COL12A1Q99715 3063 aa4.87□□□□□ -1.63
SPEN-202ENST00000438066 NDUFB3O43676 98 aa4.87□□□□□ -1.63
SPEN-202ENST00000438066 IAPPP10997 89 aa4.87□□□□□ -1.63
SPEN-202ENST00000438066 CCL3L1P16619 93 aa4.87□□□□□ -1.63
SPEN-202ENST00000438066 GNG10P50151 68 aa4.87□□□□□ -1.63
SPEN-202ENST00000438066 ARHGDIBP52566 201 aa4.87□□□□□ -1.63
SPEN-202ENST00000438066 MRPS11P82912 194 aaKnown RBP4.87□□□□□ -1.63
SPEN-202ENST00000438066 TMEM267Q0VDI3 215 aaPredicted RBP4.87□□□□□ -1.63
SPEN-202ENST00000438066 POU2AF1Q16633 256 aa4.87□□□□□ -1.63
SPEN-202ENST00000438066 TMEM155Q4W5P6 130 aa4.87□□□□□ -1.63
SPEN-202ENST00000438066 REG3GQ6UW15 175 aa4.87□□□□□ -1.63
SPEN-202ENST00000438066 TMEM14EPQ6UXP3 125 aa4.87□□□□□ -1.63
SPEN-202ENST00000438066 IL34Q6ZMJ4 242 aa4.87□□□□□ -1.63
SPEN-202ENST00000438066 MTURNQ8N3F0 131 aa4.87□□□□□ -1.63
SPEN-202ENST00000438066 C8orf31Q8N9H6 132 aa4.87□□□□□ -1.63
SPEN-202ENST00000438066 HSD17B11Q8NBQ5 300 aa4.87□□□□□ -1.63
SPEN-202ENST00000438066 OR4S2Q8NH73 311 aa4.87□□□□□ -1.63
SPEN-202ENST00000438066 ZNF596Q8TC21 504 aa4.87□□□□□ -1.63
SPEN-202ENST00000438066 ADTRPQ96IZ2 230 aa4.87□□□□□ -1.63
SPEN-202ENST00000438066 C20orf24Q9BUV8 137 aa4.87□□□□□ -1.63
SPEN-202ENST00000438066 RBKSQ9H477 322 aa4.87□□□□□ -1.63
SPEN-202ENST00000438066 PSENENQ9NZ42 101 aa4.87□□□□□ -1.63
SPEN-202ENST00000438066 PRELID3BQ9Y3B1 194 aa4.87□□□□□ -1.63
SPEN-202ENST00000438066 UBR5O95071 2799 aaPredicted RBP4.87□□□□□ -1.63
SPEN-202ENST00000438066 ASH1LQ9NR48 2969 aaKnown RBP4.87□□□□□ -1.63
SPEN-202ENST00000438066 A0A1W2PPR1 153 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 LYNX1G3V0Z9 82 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 ARG1P05089 322 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 SOD3P08294 240 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 METTL15P1P0C7V9 234 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 LYNX1P0DP58 116 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 NQO2P16083 231 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 COL8A2P25067 703 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 ATP6V0CP27449 155 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 RAB5CP51148 216 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 ZNF137PP52743 207 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 MRPL23Q16540 153 aaKnown RBP4.86□□□□□ -1.63
SPEN-202ENST00000438066 ZNF833PQ6ZTB9 187 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 LYG1Q8N1E2 194 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 C11orf42Q8N5U0 333 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 ZNF525Q8N782 197 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 H1FXQ92522 213 aaKnown RBP4.86□□□□□ -1.63
SPEN-202ENST00000438066 TAF15Q92804 592 aaKnown RBP eCLIP4.86□□□□□ -1.63
SPEN-202ENST00000438066 OR4C12Q96R67 309 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 PARD6GQ9BYG4 376 aaPredicted RBP4.86□□□□□ -1.63
SPEN-202ENST00000438066 OCR1Q9BZK8 76 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 CBLN4Q9NTU7 201 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 ZNRD1Q9P1U0 126 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 CACFD1Q9UGQ2 172 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 RNF24Q9Y225 148 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 AKAP6Q13023 2319 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 LRRK2Q5S007 2527 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 ZNF462Q96JM2 2506 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 NAV3Q8IVL0 2385 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 UMAD1C9J7I0 102 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 CRYZL1O95825 349 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 IGHG4P01861 327 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 SNRPCP09234 159 aaKnown RBP4.86□□□□□ -1.63
SPEN-202ENST00000438066 CT45A6P0DMU7 189 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 CT45A5P0DMU8 189 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 CT45A7P0DMV0 189 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 CDKN1BP46527 198 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 OR2B8PP59922 312 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 HBG1P69891 147 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 HBG2P69892 147 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 RUNX1Q01196 453 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 NOTCH2NLQ7Z3S9 236 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 ZNF429Q86V71 674 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 LINC00311Q8N616 119 aa4.86□□□□□ -1.63
SPEN-202ENST00000438066 OR4C5Q8NGB2 326 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms