RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 EIF3GO75821 320 aaKnown RBP eCLIP13.16□□□□□ -0.3
PTPN13-204ENST00000436978 ARL6IP6Q8N6S5 226 aa13.16□□□□□ -0.3
PTPN13-204ENST00000436978 SRP19P09132 144 aaKnown RBP13.16□□□□□ -0.3
PTPN13-204ENST00000436978 SHISA3A0PJX4 238 aa13.16□□□□□ -0.3
PTPN13-204ENST00000436978 CCL20P78556 96 aa13.16□□□□□ -0.3
PTPN13-204ENST00000436978 SPSB3Q6PJ21 355 aa13.16□□□□□ -0.3
PTPN13-204ENST00000436978 MDS2Q8NDY4 140 aa13.16□□□□□ -0.3
PTPN13-204ENST00000436978 IGKV1-9A0A0C4DH69 117 aa13.15□□□□□ -0.3
PTPN13-204ENST00000436978 IGHV1-8P0DP01 117 aa13.15□□□□□ -0.3
PTPN13-204ENST00000436978 CRPP02741 224 aa13.15□□□□□ -0.3
PTPN13-204ENST00000436978 DDTP30046 118 aa13.15□□□□□ -0.3
PTPN13-204ENST00000436978 TMEM200BQ69YZ2 307 aa13.15□□□□□ -0.3
PTPN13-204ENST00000436978 LILRA1O75019 489 aa13.15□□□□□ -0.3
PTPN13-204ENST00000436978 Q5BKY6 102 aa13.15□□□□□ -0.3
PTPN13-204ENST00000436978 C18orf15Q96N68 181 aa13.15□□□□□ -0.3
PTPN13-204ENST00000436978 EPDR1Q9UM22 224 aa13.15□□□□□ -0.3
PTPN13-204ENST00000436978 SLC25A15Q9Y619 301 aa13.15□□□□□ -0.3
PTPN13-204ENST00000436978 LINC01549A6NIU2 74 aa13.15□□□□□ -0.3
PTPN13-204ENST00000436978 NABP1Q96AH0 204 aa13.15□□□□□ -0.3
PTPN13-204ENST00000436978 IGKV1D-13A0A0B4J2D9 117 aa13.15□□□□□ -0.31
PTPN13-204ENST00000436978 IGKV1-13P0DP09 117 aa13.15□□□□□ -0.31
PTPN13-204ENST00000436978 NSUN5P1Q3KNT7 163 aa13.15□□□□□ -0.31
PTPN13-204ENST00000436978 FAM169BQ8N8A8 192 aa13.15□□□□□ -0.31
PTPN13-204ENST00000436978 VGLL1Q99990 258 aa13.15□□□□□ -0.31
PTPN13-204ENST00000436978 ZNF688P0C7X2 276 aa13.14□□□□□ -0.31
PTPN13-204ENST00000436978 SLC25A48Q6ZT89 311 aaKnown RBP13.14□□□□□ -0.31
PTPN13-204ENST00000436978 FOXC2Q99958 501 aa13.14□□□□□ -0.31
PTPN13-204ENST00000436978 NEUROG3Q9Y4Z2 214 aa13.14□□□□□ -0.31
PTPN13-204ENST00000436978 C1QTNF9BB2RNN3 333 aa13.14□□□□□ -0.31
PTPN13-204ENST00000436978 PPBPP02775 128 aa13.14□□□□□ -0.31
PTPN13-204ENST00000436978 ATP5G3P48201 142 aa13.14□□□□□ -0.31
PTPN13-204ENST00000436978 SRSF1Q07955 248 aaKnown RBP eCLIP13.14□□□□□ -0.31
PTPN13-204ENST00000436978 A0A1W2PRE2 83 aa13.14□□□□□ -0.31
PTPN13-204ENST00000436978 HEPN1Q6WQI6 88 aa13.14□□□□□ -0.31
PTPN13-204ENST00000436978 ADAMTS9Q9P2N4 1935 aa13.14□□□□□ -0.31
PTPN13-204ENST00000436978 SLC17A3O00476 420 aa13.14□□□□□ -0.31
PTPN13-204ENST00000436978 MBD3L4A6NDZ8 208 aaPredicted RBP13.14□□□□□ -0.31
PTPN13-204ENST00000436978 MBD3L3A6NE82 208 aaPredicted RBP13.14□□□□□ -0.31
PTPN13-204ENST00000436978 MBD3L5A6NJ08 208 aaPredicted RBP13.14□□□□□ -0.31
PTPN13-204ENST00000436978 ERVH48-1M5A8F1 160 aa13.14□□□□□ -0.31
PTPN13-204ENST00000436978 SLC25A20O43772 301 aa13.14□□□□□ -0.31
PTPN13-204ENST00000436978 MBD3L2Q8NHZ7 208 aaPredicted RBP13.14□□□□□ -0.31
PTPN13-204ENST00000436978 PEF1Q9UBV8 284 aaKnown RBP13.14□□□□□ -0.31
PTPN13-204ENST00000436978 GTF3C1Q12789 2109 aa13.13□□□□□ -0.31
PTPN13-204ENST00000436978 HTN3P15516 51 aa13.13□□□□□ -0.31
PTPN13-204ENST00000436978 FAM223BA6NKX1 122 aa13.13□□□□□ -0.31
PTPN13-204ENST00000436978 ZNF585BQ52M93 769 aa13.13□□□□□ -0.31
PTPN13-204ENST00000436978 TPTE2P1Q5T6R2 138 aa13.13□□□□□ -0.31
PTPN13-204ENST00000436978 FAM223AQ8IWN6 122 aa13.13□□□□□ -0.31
PTPN13-204ENST00000436978 ORMDL2Q53FV1 153 aa13.13□□□□□ -0.31
PTPN13-204ENST00000436978 LINC01356Q8N9X3 169 aa13.13□□□□□ -0.31
PTPN13-204ENST00000436978 USMG5Q96IX5 58 aa13.13□□□□□ -0.31
PTPN13-204ENST00000436978 VCX2Q9H322 139 aa13.13□□□□□ -0.31
PTPN13-204ENST00000436978 NXT2Q9NPJ8 142 aaKnown RBP13.13□□□□□ -0.31
PTPN13-204ENST00000436978 NOTCH4Q99466 2003 aa13.13□□□□□ -0.31
PTPN13-204ENST00000436978 TRAV8-6A0A0B4J262 113 aa13.12□□□□□ -0.31
PTPN13-204ENST00000436978 DMRT1Q9Y5R6 373 aa13.12□□□□□ -0.31
PTPN13-204ENST00000436978 TTC32Q5I0X7 151 aa13.12□□□□□ -0.31
PTPN13-204ENST00000436978 TRGV4A0A0C4DH28 118 aa13.12□□□□□ -0.31
PTPN13-204ENST00000436978 EGR1P18146 543 aa13.12□□□□□ -0.31
PTPN13-204ENST00000436978 A0A0A6YYD4 124 aa13.12□□□□□ -0.31
PTPN13-204ENST00000436978 TMEM50AO95807 157 aa13.12□□□□□ -0.31
PTPN13-204ENST00000436978 GAS1P54826 345 aa13.12□□□□□ -0.31
PTPN13-204ENST00000436978 SLC25A16P16260 332 aa13.12□□□□□ -0.31
PTPN13-204ENST00000436978 ATOH7Q8N100 152 aa13.12□□□□□ -0.31
PTPN13-204ENST00000436978 IGHV1-3A0A0C4DH29 117 aa13.12□□□□□ -0.31
PTPN13-204ENST00000436978 GNLYP22749 145 aa13.12□□□□□ -0.31
PTPN13-204ENST00000436978 Q0VFX4 171 aa13.12□□□□□ -0.31
PTPN13-204ENST00000436978 BEX4Q9NWD9 120 aaPredicted RBP13.12□□□□□ -0.31
PTPN13-204ENST00000436978 FOXA3P55318 350 aaPredicted RBP13.11□□□□□ -0.31
PTPN13-204ENST00000436978 EFNB3Q15768 340 aa13.11□□□□□ -0.31
PTPN13-204ENST00000436978 C15orf32Q32M92 178 aa13.11□□□□□ -0.31
PTPN13-204ENST00000436978 RPUSD1Q9UJJ7 312 aaKnown RBP13.11□□□□□ -0.31
PTPN13-204ENST00000436978 NDUFA3O95167 84 aa13.11□□□□□ -0.31
PTPN13-204ENST00000436978 CLPSP04118 112 aa13.11□□□□□ -0.31
PTPN13-204ENST00000436978 LINC01559Q495D7 138 aa13.11□□□□□ -0.31
PTPN13-204ENST00000436978 COL6A6A6NMZ7 2263 aa13.11□□□□□ -0.31
PTPN13-204ENST00000436978 IGHV3OR16-8A0A075B7F1 116 aa13.11□□□□□ -0.31
PTPN13-204ENST00000436978 NDUFS8O00217 210 aa13.11□□□□□ -0.31
PTPN13-204ENST00000436978 C3orf36Q3SXR2 165 aa13.11□□□□□ -0.31
PTPN13-204ENST00000436978 ATP5L2Q7Z4Y8 100 aa13.11□□□□□ -0.31
PTPN13-204ENST00000436978 BEND2Q8NDZ0 799 aa13.11□□□□□ -0.31
PTPN13-204ENST00000436978 GLMPQ8WWB7 406 aa13.11□□□□□ -0.31
PTPN13-204ENST00000436978 PRADC1Q9BSG0 188 aa13.11□□□□□ -0.31
PTPN13-204ENST00000436978 OSTCQ9NRP0 149 aa13.11□□□□□ -0.31
PTPN13-204ENST00000436978 NUDT11Q96G61 164 aa13.11□□□□□ -0.31
PTPN13-204ENST00000436978 LYNX1G3V0Z9 82 aa13.11□□□□□ -0.31
PTPN13-204ENST00000436978 LYNX1P0DP58 116 aa13.11□□□□□ -0.31
PTPN13-204ENST00000436978 GATA3P23771 443 aa13.11□□□□□ -0.31
PTPN13-204ENST00000436978 TRGV9Q99603 122 aa13.11□□□□□ -0.31
PTPN13-204ENST00000436978 GATA2P23769 480 aaPredicted RBP13.1□□□□□ -0.31
PTPN13-204ENST00000436978 GNG5P63218 68 aa13.1□□□□□ -0.31
PTPN13-204ENST00000436978 FGFBP3Q8TAT2 258 aa13.1□□□□□ -0.31
PTPN13-204ENST00000436978 SRSF8Q9BRL6 282 aaKnown RBP13.1□□□□□ -0.31
PTPN13-204ENST00000436978 CYSLTR1Q9Y271 337 aa13.1□□□□□ -0.31
PTPN13-204ENST00000436978 TSPAN13O95857 204 aa13.1□□□□□ -0.31
PTPN13-204ENST00000436978 TRBV7-9A0A0J9YWB2 115 aa13.1□□□□□ -0.31
PTPN13-204ENST00000436978 SAP30O75446 220 aa13.1□□□□□ -0.31
PTPN13-204ENST00000436978 CD24P25063 80 aa13.1□□□□□ -0.31
PTPN13-204ENST00000436978 ZCCHC24Q8N2G6 241 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms