RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 PRSS54Q6PEW0 395 aa11.44□□□□□ -0.58
PTCD1-204ENST00000430982 TOMM20LQ6UXN7 152 aa11.44□□□□□ -0.58
PTCD1-204ENST00000430982 RBPMS2Q6ZRY4 209 aaKnown RBP11.44□□□□□ -0.58
PTCD1-204ENST00000430982 TMEM61Q8N0U2 210 aa11.44□□□□□ -0.58
PTCD1-204ENST00000430982 Q8N1Y9 231 aa11.44□□□□□ -0.58
PTCD1-204ENST00000430982 ENKURQ8TC29 256 aa11.44□□□□□ -0.58
PTCD1-204ENST00000430982 MITD1Q8WV92 249 aa11.44□□□□□ -0.58
PTCD1-204ENST00000430982 SEC22CQ9BRL7 303 aa11.44□□□□□ -0.58
PTCD1-204ENST00000430982 PUS1Q9Y606 427 aaKnown RBP eCLIP11.44□□□□□ -0.58
PTCD1-204ENST00000430982 SORL1Q92673 2214 aa11.44□□□□□ -0.58
PTCD1-204ENST00000430982 IGHV3-49A0A0A0MS15 119 aa11.43□□□□□ -0.58
PTCD1-204ENST00000430982 WRBO00258 174 aa11.43□□□□□ -0.58
PTCD1-204ENST00000430982 SYNGR2O43760 224 aa11.43□□□□□ -0.58
PTCD1-204ENST00000430982 ATP5IP56385 69 aaPredicted RBP11.43□□□□□ -0.58
PTCD1-204ENST00000430982 IFITM3Q01628 133 aa11.43□□□□□ -0.58
PTCD1-204ENST00000430982 TIGITQ495A1 244 aa11.43□□□□□ -0.58
PTCD1-204ENST00000430982 SLC16A13Q7RTY0 426 aa11.43□□□□□ -0.58
PTCD1-204ENST00000430982 ACY3Q96HD9 319 aa11.43□□□□□ -0.58
PTCD1-204ENST00000430982 CIB3Q96Q77 187 aaPredicted RBP11.43□□□□□ -0.58
PTCD1-204ENST00000430982 GINS3Q9BRX5 216 aa11.43□□□□□ -0.58
PTCD1-204ENST00000430982 TRAV30A0A087WSZ9 112 aa11.42□□□□□ -0.58
PTCD1-204ENST00000430982 TRAV14DV4A0A0A6YYC5 116 aa11.42□□□□□ -0.58
PTCD1-204ENST00000430982 IGHV7-4-1A0A0J9YVY3 117 aa11.42□□□□□ -0.58
PTCD1-204ENST00000430982 FRMD6-AS1P0C7T7 363 aa11.42□□□□□ -0.58
PTCD1-204ENST00000430982 IGHV4-30-4P0DP06 118 aa11.42□□□□□ -0.58
PTCD1-204ENST00000430982 POLR2GP62487 172 aaKnown RBP eCLIP11.42□□□□□ -0.58
PTCD1-204ENST00000430982 RAB11AP62491 216 aa11.42□□□□□ -0.58
PTCD1-204ENST00000430982 RPP30P78346 268 aaKnown RBP11.42□□□□□ -0.58
PTCD1-204ENST00000430982 IAH1Q2TAA2 248 aaPredicted RBP11.42□□□□□ -0.58
PTCD1-204ENST00000430982 TMEM116Q8NCL8 245 aa11.42□□□□□ -0.58
PTCD1-204ENST00000430982 OR1S2Q8NGQ3 325 aa11.42□□□□□ -0.58
PTCD1-204ENST00000430982 ZNF431Q8TF32 576 aaPredicted RBP11.42□□□□□ -0.58
PTCD1-204ENST00000430982 NPIPB3Q92617 1050 aa11.42□□□□□ -0.58
PTCD1-204ENST00000430982 OR10C1Q96KK4 312 aa11.42□□□□□ -0.58
PTCD1-204ENST00000430982 NEURL2Q9BR09 285 aa11.42□□□□□ -0.58
PTCD1-204ENST00000430982 SMPXQ9UHP9 88 aa11.42□□□□□ -0.58
PTCD1-204ENST00000430982 PLECQ15149 4684 aaKnown RBP11.41□□□□□ -0.58
PTCD1-204ENST00000430982 IGHV3OR16-13A0A075B7E8 117 aa11.41□□□□□ -0.58
PTCD1-204ENST00000430982 IGHV3-74A0A0B4J1X5 117 aa11.41□□□□□ -0.58
PTCD1-204ENST00000430982 TRAV25A0A0B4J276 109 aa11.41□□□□□ -0.58
PTCD1-204ENST00000430982 CCSO14618 274 aa11.41□□□□□ -0.58
PTCD1-204ENST00000430982 SCGB1D2O95969 90 aa11.41□□□□□ -0.58
PTCD1-204ENST00000430982 IGKV1-17P01599 117 aa11.41□□□□□ -0.58
PTCD1-204ENST00000430982 CD7P09564 240 aa11.41□□□□□ -0.58
PTCD1-204ENST00000430982 IGLC1P0CG04 106 aa11.41□□□□□ -0.58
PTCD1-204ENST00000430982 OR10J1P30954 320 aa11.41□□□□□ -0.58
PTCD1-204ENST00000430982 NKX2-1P43699 371 aaPredicted RBP11.41□□□□□ -0.58
PTCD1-204ENST00000430982 LAMTOR1Q6IAA8 161 aa11.41□□□□□ -0.58
PTCD1-204ENST00000430982 SBSPONQ8IVN8 264 aa11.41□□□□□ -0.58
PTCD1-204ENST00000430982 OR4D5Q8NGN0 318 aa11.41□□□□□ -0.58
PTCD1-204ENST00000430982 SLC35E1Q96K37 410 aa11.41□□□□□ -0.58
PTCD1-204ENST00000430982 RHPN1-AS1Q9BWJ2 59 aa11.41□□□□□ -0.58
PTCD1-204ENST00000430982 TUBA4BQ9H853 241 aa11.41□□□□□ -0.58
PTCD1-204ENST00000430982 ZFAND3Q9H8U3 227 aa11.41□□□□□ -0.58
PTCD1-204ENST00000430982 GSKIPQ9P0R6 139 aa11.41□□□□□ -0.58
PTCD1-204ENST00000430982 HERC2O95714 4834 aa11.41□□□□□ -0.58
PTCD1-204ENST00000430982 FAM25EA8MYX2 175 aa11.4□□□□□ -0.58
PTCD1-204ENST00000430982 H3BP45 60 aa11.4□□□□□ -0.58
PTCD1-204ENST00000430982 CHEK1O14757 476 aa11.4□□□□□ -0.58
PTCD1-204ENST00000430982 GPX4P36969 197 aaPredicted RBP11.4□□□□□ -0.58
PTCD1-204ENST00000430982 ID3Q02535 119 aa11.4□□□□□ -0.58
PTCD1-204ENST00000430982 SPANXN5Q5MJ07 72 aa11.4□□□□□ -0.58
PTCD1-204ENST00000430982 C12orf45Q8N5I9 185 aaPredicted RBP11.4□□□□□ -0.58
PTCD1-204ENST00000430982 ZBTB8BQ8NAP8 495 aaPredicted RBP11.4□□□□□ -0.58
PTCD1-204ENST00000430982 CITED4Q96RK1 184 aa11.4□□□□□ -0.58
PTCD1-204ENST00000430982 IGHV3-66A0A0C4DH42 116 aa11.39□□□□□ -0.59
PTCD1-204ENST00000430982 SSSCA1O60232 199 aa11.39□□□□□ -0.59
PTCD1-204ENST00000430982 BMI1P35226 326 aa11.39□□□□□ -0.59
PTCD1-204ENST00000430982 Q8WTZ3 238 aa11.39□□□□□ -0.59
PTCD1-204ENST00000430982 RNF2Q99496 336 aa11.39□□□□□ -0.59
PTCD1-204ENST00000430982 WFDC10AQ9H1F0 79 aa11.39□□□□□ -0.59
PTCD1-204ENST00000430982 C19orf73Q9NVV2 129 aa11.39□□□□□ -0.59
PTCD1-204ENST00000430982 PSENENQ9NZ42 101 aa11.39□□□□□ -0.59
PTCD1-204ENST00000430982 STRAPQ9Y3F4 350 aaKnown RBP11.39□□□□□ -0.59
PTCD1-204ENST00000430982 C5orf51A6NDU8 294 aa11.38□□□□□ -0.59
PTCD1-204ENST00000430982 TSPAN4O14817 238 aa11.38□□□□□ -0.59
PTCD1-204ENST00000430982 IL5P05113 134 aa11.38□□□□□ -0.59
PTCD1-204ENST00000430982 DEFA1P59665 94 aa11.38□□□□□ -0.59
PTCD1-204ENST00000430982 DEFA3P59666 94 aa11.38□□□□□ -0.59
PTCD1-204ENST00000430982 YPEL3P61236 119 aaPredicted RBP11.38□□□□□ -0.59
PTCD1-204ENST00000430982 NRARPQ7Z6K4 114 aa11.38□□□□□ -0.59
PTCD1-204ENST00000430982 DEFB125Q8N687 156 aa11.38□□□□□ -0.59
PTCD1-204ENST00000430982 ST8SIA2Q92186 375 aa11.38□□□□□ -0.59
PTCD1-204ENST00000430982 METTL26Q96S19 204 aa11.38□□□□□ -0.59
PTCD1-204ENST00000430982 SPAG8Q99932 426 aaPredicted RBP11.38□□□□□ -0.59
PTCD1-204ENST00000430982 IGKV3-7A0A075B6H7 116 aa11.37□□□□□ -0.59
PTCD1-204ENST00000430982 ZFP92A6NM28 416 aa11.37□□□□□ -0.59
PTCD1-204ENST00000430982 A8MZ25 164 aa11.37□□□□□ -0.59
PTCD1-204ENST00000430982 OR11H12B2RN74 326 aa11.37□□□□□ -0.59
PTCD1-204ENST00000430982 APOHP02749 345 aaPredicted RBP11.37□□□□□ -0.59
PTCD1-204ENST00000430982 NPPCP23582 126 aa11.37□□□□□ -0.59
PTCD1-204ENST00000430982 GAMTQ14353 236 aa11.37□□□□□ -0.59
PTCD1-204ENST00000430982 TMEM231Q9H6L2 316 aa11.37□□□□□ -0.59
PTCD1-204ENST00000430982 INMT-MINDY4F8WBC2 141 aa11.36□□□□□ -0.59
PTCD1-204ENST00000430982 TOMM40O96008 361 aa11.36□□□□□ -0.59
PTCD1-204ENST00000430982 IL4P05112 153 aa11.36□□□□□ -0.59
PTCD1-204ENST00000430982 RD3LP0DJH9 198 aa11.36□□□□□ -0.59
PTCD1-204ENST00000430982 TFPI2P48307 235 aa11.36□□□□□ -0.59
PTCD1-204ENST00000430982 TCF24Q7RTU0 167 aa11.36□□□□□ -0.59
PTCD1-204ENST00000430982 NARS2Q96I59 477 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms