RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 CD24P25063 80 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 UBE2BP63146 152 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 PRB3Q04118 309 aaPredicted RBP4.77□□□□□ -1.65
HERC4-206ENST00000427635 CR1LQ2VPA4 569 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 ANXA2RQ3ZCQ2 193 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 CYSLTR1Q9Y271 337 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 LHFPL6Q9Y693 200 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 TDRD15B5MCY1 1934 aaKnown RBP4.77□□□□□ -1.65
HERC4-206ENST00000427635 IGHV3-73A0A0B4J1V6 119 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 TMEM213A2RRL7 107 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 GRIFINA4D1Z8 144 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 WIPF3A6NGB9 483 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 K7ENP7 123 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 GCM2O75603 506 aaPredicted RBP4.77□□□□□ -1.65
HERC4-206ENST00000427635 ERGP11308 486 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 CCL3L1P16619 93 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 RCC1P18754 421 aaPredicted RBP4.77□□□□□ -1.65
HERC4-206ENST00000427635 RARRES2Q99969 163 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 OVOL2Q9BRP0 275 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 PCM1Q15154 2024 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 A0A0G2JNJ9 132 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 LINC01549A6NIU2 74 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 H3BMM0 161 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 HBDP02042 147 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 APOHP02749 345 aaPredicted RBP4.77□□□□□ -1.65
HERC4-206ENST00000427635 CRYBA2P53672 197 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 RBX1P62877 108 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 IFITM2Q01629 132 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 ZNF660Q6AZW8 331 aaPredicted RBP4.77□□□□□ -1.65
HERC4-206ENST00000427635 C15orf53Q8NAA6 179 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 UBE2WQ96B02 151 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 C18orf15Q96N68 181 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 Q9UFV3 132 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 FAM186AA6NE01 2351 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 ZIC3O60481 467 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 IGHV4-39P01824 125 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 LHX2P50458 406 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 KLRD1Q13241 179 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 C9orf66Q5T8R8 295 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 SUMO4Q6EEV6 95 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 NDUFAF3Q9BU61 184 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 SMDT1Q9H4I9 107 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 KLHDC2Q9Y2U9 406 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 ZNF318Q5VUA4 2279 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 MYO18AQ92614 2054 aaKnown RBP4.76□□□□□ -1.65
HERC4-206ENST00000427635 HMX2A2RU54 273 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 EVI2AP22794 236 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 PLNP26678 52 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 SEC11AP67812 179 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 ZNF506Q5JVG8 444 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 MRPL14Q6P1L8 145 aaKnown RBP4.76□□□□□ -1.65
HERC4-206ENST00000427635 RPP21Q9H633 154 aaKnown RBP4.76□□□□□ -1.65
HERC4-206ENST00000427635 FNDC4Q9H6D8 234 aaPredicted RBP4.76□□□□□ -1.65
HERC4-206ENST00000427635 PRRC2BQ5JSZ5 2229 aaKnown RBP4.76□□□□□ -1.65
HERC4-206ENST00000427635 IGHV2-26A0A0B4J1V2 119 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 A0A0G2JMM0 328 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 A0A1W2PPB8 328 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 A0A1W2PRS3 328 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 KIR3DP1A8MWS1 328 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 BAALCQ8WXS3 180 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 PRSS46E5RG02 174 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 IGF2P01344 180 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 UMODP07911 640 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 FAM90A2PQ658T7 463 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 ZNF525Q8N782 197 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 OR4D11Q8NGI4 311 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 SLIRPQ9GZT3 109 aaKnown RBP4.76□□□□□ -1.65
HERC4-206ENST00000427635 ZNFX1Q9P2E3 1918 aaKnown RBP4.76□□□□□ -1.65
HERC4-206ENST00000427635 MBD3L5A6NJ08 208 aaPredicted RBP4.76□□□□□ -1.65
HERC4-206ENST00000427635 IGHV1-46P01743 117 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 CELA3BP08861 270 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 PSG7Q13046 419 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 ORMDL2Q53FV1 153 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 CENPWQ5EE01 88 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 SLC25A34Q6PIV7 304 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 BHLHA9Q7RTU4 235 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 MBD3L2Q8NHZ7 208 aaPredicted RBP4.76□□□□□ -1.65
HERC4-206ENST00000427635 SDHCQ99643 169 aaPredicted RBP4.76□□□□□ -1.65
HERC4-206ENST00000427635 SNHG12Q9BXW3 62 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 SPANXCQ9NY87 97 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 A0A1B0GTL3 188 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 A0A1B0GUT8 65 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 FAM90A9PA6NNJ1 464 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 IGLV3-19P01714 112 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 IL17RELQ6ZVW7 336 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 NIT1Q86X76 327 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 HSPB9Q9BQS6 159 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 PPP1R3EQ9H7J1 279 aa4.76□□□□□ -1.65
HERC4-206ENST00000427635 LSM4Q9Y4Z0 139 aaKnown RBP4.76□□□□□ -1.65
HERC4-206ENST00000427635 MYH14Q7Z406 1995 aaKnown RBP4.76□□□□□ -1.65
HERC4-206ENST00000427635 LAMA4Q16363 1823 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 TAF1LQ8IZX4 1826 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 YPEL1O60688 119 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 RAMP1O60894 148 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 CBLN1P23435 193 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 OCIAD2Q56VL3 154 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 YPEL2Q96QA6 119 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 GGTLC1Q9BX51 225 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 MBNL3Q9NUK0 354 aaKnown RBP4.75□□□□□ -1.65
HERC4-206ENST00000427635 SAA2-SAA4A0A096LPE2 208 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms