RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 HOXA5P20719 270 aa10.89□□□□□ -0.67
SPG11-202ENST00000427534 FAM169BQ8N8A8 192 aa10.89□□□□□ -0.67
SPG11-202ENST00000427534 RCHY1Q96PM5 261 aa10.89□□□□□ -0.67
SPG11-202ENST00000427534 NYNRINQ9P2P1 1898 aaKnown RBP10.89□□□□□ -0.67
SPG11-202ENST00000427534 YLPM1P49750 1951 aaKnown RBP10.89□□□□□ -0.67
SPG11-202ENST00000427534 HIGD1CA8MV81 97 aa10.89□□□□□ -0.67
SPG11-202ENST00000427534 LINC00158P58513 81 aa10.89□□□□□ -0.67
SPG11-202ENST00000427534 RCC1LQ96I51 464 aaKnown RBP10.89□□□□□ -0.67
SPG11-202ENST00000427534 C5orf63A6NC05 138 aa10.89□□□□□ -0.67
SPG11-202ENST00000427534 ATP5LO75964 103 aa10.89□□□□□ -0.67
SPG11-202ENST00000427534 CGB3P0DN86 165 aa10.89□□□□□ -0.67
SPG11-202ENST00000427534 SSC4DQ8WTU2 575 aa10.89□□□□□ -0.67
SPG11-202ENST00000427534 IGHV3-16A0A0C4DH30 117 aa10.88□□□□□ -0.67
SPG11-202ENST00000427534 JOSD1Q15040 202 aaPredicted RBP10.88□□□□□ -0.67
SPG11-202ENST00000427534 NR2C2APQ86WQ0 139 aa10.88□□□□□ -0.67
SPG11-202ENST00000427534 TRAV3A0A0B4J244 114 aa10.88□□□□□ -0.67
SPG11-202ENST00000427534 NCR2O95944 276 aa10.88□□□□□ -0.67
SPG11-202ENST00000427534 OR5A1Q8NGJ0 315 aa10.88□□□□□ -0.67
SPG11-202ENST00000427534 RPP21Q9H633 154 aaKnown RBP10.88□□□□□ -0.67
SPG11-202ENST00000427534 ST20Q9HBF5 79 aa10.88□□□□□ -0.67
SPG11-202ENST00000427534 ZNF362Q5T0B9 420 aaPredicted RBP10.88□□□□□ -0.67
SPG11-202ENST00000427534 C1orf122Q6ZSJ8 110 aa10.88□□□□□ -0.67
SPG11-202ENST00000427534 Q8TAT8 98 aa10.88□□□□□ -0.67
SPG11-202ENST00000427534 UPK2O00526 184 aa10.88□□□□□ -0.67
SPG11-202ENST00000427534 EFNA4P52798 201 aa10.88□□□□□ -0.67
SPG11-202ENST00000427534 VCX2Q9H322 139 aa10.88□□□□□ -0.67
SPG11-202ENST00000427534 ALPK2Q86TB3 2170 aa10.88□□□□□ -0.67
SPG11-202ENST00000427534 LINC00614P0C842 121 aa10.88□□□□□ -0.67
SPG11-202ENST00000427534 SYNJ2BPP57105 145 aa10.88□□□□□ -0.67
SPG11-202ENST00000427534 SLC25A34Q6PIV7 304 aa10.87□□□□□ -0.67
SPG11-202ENST00000427534 PSMG3Q9BT73 122 aaPredicted RBP10.87□□□□□ -0.67
SPG11-202ENST00000427534 SCRT1Q9BWW7 348 aa10.87□□□□□ -0.67
SPG11-202ENST00000427534 SEPSECSQ9HD40 501 aaKnown RBP10.87□□□□□ -0.67
SPG11-202ENST00000427534 PI4KAP42356 2102 aa10.87□□□□□ -0.67
SPG11-202ENST00000427534 ZNF581Q9P0T4 197 aa10.87□□□□□ -0.67
SPG11-202ENST00000427534 A0A087WX48 190 aa10.87□□□□□ -0.67
SPG11-202ENST00000427534 MBD3L4A6NDZ8 208 aaPredicted RBP10.87□□□□□ -0.67
SPG11-202ENST00000427534 MBD3L3A6NE82 208 aaPredicted RBP10.87□□□□□ -0.67
SPG11-202ENST00000427534 MBD3L5A6NJ08 208 aaPredicted RBP10.87□□□□□ -0.67
SPG11-202ENST00000427534 DMRTC2Q8IXT2 367 aaPredicted RBP10.87□□□□□ -0.67
SPG11-202ENST00000427534 MBD3L2Q8NHZ7 208 aaPredicted RBP10.87□□□□□ -0.67
SPG11-202ENST00000427534 H3BRM9 83 aa10.87□□□□□ -0.67
SPG11-202ENST00000427534 MRPS16Q9Y3D3 137 aaKnown RBP10.87□□□□□ -0.67
SPG11-202ENST00000427534 IGLV3-32A0A0A0MS00 114 aa10.87□□□□□ -0.67
SPG11-202ENST00000427534 OR11H12B2RN74 326 aa10.87□□□□□ -0.67
SPG11-202ENST00000427534 SPATA31B1PQ5VZV4 182 aa10.87□□□□□ -0.67
SPG11-202ENST00000427534 OR11H1Q8NG94 326 aa10.87□□□□□ -0.67
SPG11-202ENST00000427534 OR11H2Q8NH07 326 aa10.87□□□□□ -0.67
SPG11-202ENST00000427534 FMC1Q96HJ9 113 aa10.87□□□□□ -0.67
SPG11-202ENST00000427534 KNCNA6PVL3 124 aa10.86□□□□□ -0.67
SPG11-202ENST00000427534 VSIRQ9H7M9 311 aa10.86□□□□□ -0.67
SPG11-202ENST00000427534 ZNF98A6NK75 572 aa10.86□□□□□ -0.67
SPG11-202ENST00000427534 PMS2P5A8MQ11 134 aa10.86□□□□□ -0.67
SPG11-202ENST00000427534 M0QZK8 103 aa10.86□□□□□ -0.67
SPG11-202ENST00000427534 NAT1P18440 290 aa10.86□□□□□ -0.67
SPG11-202ENST00000427534 UCP1P25874 307 aa10.86□□□□□ -0.67
SPG11-202ENST00000427534 MEF2CQ06413 473 aaPredicted RBP10.86□□□□□ -0.67
SPG11-202ENST00000427534 ZNF497Q6ZNH5 498 aa10.86□□□□□ -0.67
SPG11-202ENST00000427534 C1QL4Q86Z23 238 aa10.86□□□□□ -0.67
SPG11-202ENST00000427534 ATP5IP56385 69 aaPredicted RBP10.86□□□□□ -0.67
SPG11-202ENST00000427534 TTC32Q5I0X7 151 aa10.86□□□□□ -0.67
SPG11-202ENST00000427534 RFNGQ9Y644 331 aa10.86□□□□□ -0.67
SPG11-202ENST00000427534 SDK2Q58EX2 2172 aa10.86□□□□□ -0.67
SPG11-202ENST00000427534 CD177Q8N6Q3 437 aa10.86□□□□□ -0.67
SPG11-202ENST00000427534 A0A087WWL8 130 aa10.85□□□□□ -0.67
SPG11-202ENST00000427534 A0A0A6YYD4 124 aa10.85□□□□□ -0.67
SPG11-202ENST00000427534 CTAG1AP78358 180 aa10.85□□□□□ -0.67
SPG11-202ENST00000427534 CST9LQ9H4G1 147 aa10.85□□□□□ -0.67
SPG11-202ENST00000427534 F8VVB4 439 aa10.85□□□□□ -0.67
SPG11-202ENST00000427534 F8VWA3 439 aa10.85□□□□□ -0.67
SPG11-202ENST00000427534 IGKV1D-8A0A087WSZ0 117 aa10.85□□□□□ -0.67
SPG11-202ENST00000427534 EFNA2O43921 213 aa10.85□□□□□ -0.67
SPG11-202ENST00000427534 SMIM13P0DJ93 91 aa10.85□□□□□ -0.67
SPG11-202ENST00000427534 ERCC8Q13216 396 aa10.85□□□□□ -0.67
SPG11-202ENST00000427534 RBMY1BA6NDE4 496 aaKnown RBP10.85□□□□□ -0.67
SPG11-202ENST00000427534 RBMY1EA6NEQ0 496 aaKnown RBP10.85□□□□□ -0.67
SPG11-202ENST00000427534 NTN3O00634 580 aaPredicted RBP10.85□□□□□ -0.67
SPG11-202ENST00000427534 RBMY1DP0C7P1 496 aaKnown RBP10.85□□□□□ -0.67
SPG11-202ENST00000427534 RBMY1A1P0DJD3 496 aaKnown RBP10.85□□□□□ -0.67
SPG11-202ENST00000427534 RBMY1CP0DJD4 496 aa10.85□□□□□ -0.67
SPG11-202ENST00000427534 COL25A1Q9BXS0 654 aaPredicted RBP10.85□□□□□ -0.67
SPG11-202ENST00000427534 IGHV1-3A0A0C4DH29 117 aa10.85□□□□□ -0.67
SPG11-202ENST00000427534 TMEM8BA6NDV4 472 aa10.85□□□□□ -0.67
SPG11-202ENST00000427534 C19orf67A6NJJ6 358 aa10.85□□□□□ -0.67
SPG11-202ENST00000427534 CKS1BP61024 79 aa10.85□□□□□ -0.67
SPG11-202ENST00000427534 GGNQ86UU5 652 aa10.85□□□□□ -0.67
SPG11-202ENST00000427534 TP53BP1Q12888 1972 aaPredicted RBP10.84□□□□□ -0.67
SPG11-202ENST00000427534 DOCK4Q8N1I0 1966 aa10.84□□□□□ -0.67
SPG11-202ENST00000427534 A0A1B0GUT8 65 aa10.84□□□□□ -0.67
SPG11-202ENST00000427534 J3QRE1 110 aa10.84□□□□□ -0.67
SPG11-202ENST00000427534 S100A7L2Q5SY68 101 aa10.84□□□□□ -0.67
SPG11-202ENST00000427534 IGKV1-9A0A0C4DH69 117 aa10.84□□□□□ -0.67
SPG11-202ENST00000427534 B4DSR2 109 aa10.84□□□□□ -0.67
SPG11-202ENST00000427534 RNF144BQ7Z419 303 aa10.84□□□□□ -0.67
SPG11-202ENST00000427534 HIST1H2BAQ96A08 127 aa10.84□□□□□ -0.67
SPG11-202ENST00000427534 PAX1P15863 534 aa10.84□□□□□ -0.67
SPG11-202ENST00000427534 GATD1Q8NB37 220 aa10.84□□□□□ -0.67
SPG11-202ENST00000427534 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.84□□□□□ -0.67
SPG11-202ENST00000427534 AHCTF1Q8WYP5 2266 aa10.84□□□□□ -0.67
SPG11-202ENST00000427534 HBDP02042 147 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms