RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-206	ENST00000423161	SLC25A4	P12235	298 aa		13.46	□□□□□ -0.25
SREBF1-206	ENST00000423161	EIF2B2	P49770	351 aa	Known RBP	13.46	□□□□□ -0.25
SREBF1-206	ENST00000423161	TMEM268	Q5VZI3	342 aa		13.46	□□□□□ -0.25
SREBF1-206	ENST00000423161	PRSS54	Q6PEW0	395 aa		13.46	□□□□□ -0.25
SREBF1-206	ENST00000423161		Q8NAQ8	132 aa		13.46	□□□□□ -0.25
SREBF1-206	ENST00000423161	SLC24A4	Q8NFF2	622 aa		13.46	□□□□□ -0.25
SREBF1-206	ENST00000423161	OR4C16	Q8NGL9	310 aa		13.46	□□□□□ -0.25
SREBF1-206	ENST00000423161	OR1S2	Q8NGQ3	325 aa		13.46	□□□□□ -0.25
SREBF1-206	ENST00000423161	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.46	□□□□□ -0.25
SREBF1-206	ENST00000423161	DCANP1	Q8TF63	244 aa		13.46	□□□□□ -0.25
SREBF1-206	ENST00000423161	CRYM-AS1	A6NIL9	109 aa		13.45	□□□□□ -0.26
SREBF1-206	ENST00000423161	HNRNPC	P07910	306 aa	Known RBP eCLIP	13.45	□□□□□ -0.26
SREBF1-206	ENST00000423161	GIG44	P09565	113 aa	Predicted RBP	13.45	□□□□□ -0.26
SREBF1-206	ENST00000423161	SPP1	P10451	314 aa		13.45	□□□□□ -0.26
SREBF1-206	ENST00000423161	OR10J1	P30954	320 aa		13.45	□□□□□ -0.26
SREBF1-206	ENST00000423161	DHRS2	Q13268	280 aa		13.45	□□□□□ -0.26
SREBF1-206	ENST00000423161	SPCS2	Q15005	226 aa		13.45	□□□□□ -0.26
SREBF1-206	ENST00000423161	TMEM41B	Q5BJD5	291 aa		13.45	□□□□□ -0.26
SREBF1-206	ENST00000423161	MORN3	Q6PF18	240 aa	Predicted RBP	13.45	□□□□□ -0.26
SREBF1-206	ENST00000423161	GPR141	Q7Z602	305 aa		13.45	□□□□□ -0.26
SREBF1-206	ENST00000423161	C2CD4C	Q8TF44	421 aa		13.45	□□□□□ -0.26
SREBF1-206	ENST00000423161	MRPS26	Q9BYN8	205 aa	Known RBP	13.45	□□□□□ -0.26
SREBF1-206	ENST00000423161	GPR132	Q9UNW8	380 aa		13.45	□□□□□ -0.26
SREBF1-206	ENST00000423161		U3KQE9	123 aa		13.45	□□□□□ -0.26
SREBF1-206	ENST00000423161	HELT	A6NFD8	242 aa		13.44	□□□□□ -0.26
SREBF1-206	ENST00000423161	NXPH3	O95157	252 aa		13.44	□□□□□ -0.26
SREBF1-206	ENST00000423161	C4BPB	P20851	252 aa		13.44	□□□□□ -0.26
SREBF1-206	ENST00000423161	YPEL3	P61236	119 aa	Predicted RBP	13.44	□□□□□ -0.26
SREBF1-206	ENST00000423161	IL18	Q14116	193 aa		13.44	□□□□□ -0.26
SREBF1-206	ENST00000423161		Q8WTZ3	238 aa		13.44	□□□□□ -0.26
SREBF1-206	ENST00000423161	PRRT1	Q99946	306 aa		13.44	□□□□□ -0.26
SREBF1-206	ENST00000423161	IGHV4-28	A0A0C4DH34	117 aa		13.43	□□□□□ -0.26
SREBF1-206	ENST00000423161	NPY1R	P25929	384 aa		13.43	□□□□□ -0.26
SREBF1-206	ENST00000423161	ALDH3B2	P48448	385 aa		13.43	□□□□□ -0.26
SREBF1-206	ENST00000423161	ACTL10	Q5JWF8	245 aa		13.43	□□□□□ -0.26
SREBF1-206	ENST00000423161	ETFRF1	Q6IPR1	90 aa		13.43	□□□□□ -0.26
SREBF1-206	ENST00000423161	C16orf54	Q6UWD8	224 aa		13.43	□□□□□ -0.26
SREBF1-206	ENST00000423161	OR51S1	Q8NGJ8	323 aa		13.43	□□□□□ -0.26
SREBF1-206	ENST00000423161	TMEM170A	Q8WVE7	144 aa		13.43	□□□□□ -0.26
SREBF1-206	ENST00000423161	GLMP	Q8WWB7	406 aa		13.43	□□□□□ -0.26
SREBF1-206	ENST00000423161	DIRAS2	Q96HU8	199 aa		13.43	□□□□□ -0.26
SREBF1-206	ENST00000423161	TMEM56-RWDD3	S4R434	201 aa		13.43	□□□□□ -0.26
SREBF1-206	ENST00000423161	CTDSPL	O15194	276 aa		13.42	□□□□□ -0.26
SREBF1-206	ENST00000423161	IL4	P05112	153 aa		13.42	□□□□□ -0.26
SREBF1-206	ENST00000423161	RBMY1A1	P0DJD3	496 aa	Known RBP	13.42	□□□□□ -0.26
SREBF1-206	ENST00000423161	RBMY1C	P0DJD4	496 aa		13.42	□□□□□ -0.26
SREBF1-206	ENST00000423161	SULT1A3	P0DMM9	295 aa		13.42	□□□□□ -0.26
SREBF1-206	ENST00000423161	SULT1A4	P0DMN0	295 aa		13.42	□□□□□ -0.26
SREBF1-206	ENST00000423161	MIF	P14174	115 aa		13.42	□□□□□ -0.26
SREBF1-206	ENST00000423161	RBMY1F	Q15415	496 aa	Known RBP	13.42	□□□□□ -0.26
SREBF1-206	ENST00000423161	USF2	Q15853	346 aa	Predicted RBP	13.42	□□□□□ -0.26
SREBF1-206	ENST00000423161	PSMG4	Q5JS54	123 aa		13.42	□□□□□ -0.26
SREBF1-206	ENST00000423161	CLVS1	Q8IUQ0	354 aa	Predicted RBP	13.42	□□□□□ -0.26
SREBF1-206	ENST00000423161	HRH4	Q9H3N8	390 aa		13.42	□□□□□ -0.26
SREBF1-206	ENST00000423161	C11orf94	C9JXX5	98 aa		13.41	□□□□□ -0.26
SREBF1-206	ENST00000423161	AP2S1	P53680	142 aa	Predicted RBP	13.41	□□□□□ -0.26
SREBF1-206	ENST00000423161	TCTA	P57738	103 aa		13.41	□□□□□ -0.26
SREBF1-206	ENST00000423161	NOXA1	Q86UR1	476 aa		13.41	□□□□□ -0.26
SREBF1-206	ENST00000423161	NPIPB3	Q92617	1050 aa		13.41	□□□□□ -0.26
SREBF1-206	ENST00000423161	IL22RA2	Q969J5	263 aa		13.41	□□□□□ -0.26
SREBF1-206	ENST00000423161	ACY3	Q96HD9	319 aa		13.41	□□□□□ -0.26
SREBF1-206	ENST00000423161	CLEC5A	Q9NY25	188 aa		13.41	□□□□□ -0.26
SREBF1-206	ENST00000423161	PRR13	Q9NZ81	148 aa		13.41	□□□□□ -0.26
SREBF1-206	ENST00000423161	RABL2A	Q9UBK7	228 aa	Predicted RBP	13.41	□□□□□ -0.26
SREBF1-206	ENST00000423161	CACFD1	Q9UGQ2	172 aa		13.41	□□□□□ -0.26
SREBF1-206	ENST00000423161	RABL2B	Q9UNT1	228 aa		13.41	□□□□□ -0.26
SREBF1-206	ENST00000423161	ANKRD20A5P	A0PJZ0	165 aa		13.4	□□□□□ -0.26
SREBF1-206	ENST00000423161	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.4	□□□□□ -0.26
SREBF1-206	ENST00000423161	IGLL5	B9A064	214 aa		13.4	□□□□□ -0.26
SREBF1-206	ENST00000423161	TOMM40	O96008	361 aa		13.4	□□□□□ -0.26
SREBF1-206	ENST00000423161	NMS	Q5H8A3	153 aa		13.4	□□□□□ -0.26
SREBF1-206	ENST00000423161	RAB40C	Q96S21	281 aa		13.4	□□□□□ -0.26
SREBF1-206	ENST00000423161	CCDC59	Q9P031	241 aa	Known RBP	13.4	□□□□□ -0.26
SREBF1-206	ENST00000423161	KCNIP3	Q9Y2W7	256 aa		13.4	□□□□□ -0.26
SREBF1-206	ENST00000423161		X6R8D5	127 aa		13.4	□□□□□ -0.26
SREBF1-206	ENST00000423161	GSTZ1	O43708	216 aa	Predicted RBP	13.39	□□□□□ -0.27
SREBF1-206	ENST00000423161	IFNA10	P01566	189 aa		13.39	□□□□□ -0.27
SREBF1-206	ENST00000423161	RD3L	P0DJH9	198 aa		13.39	□□□□□ -0.27
SREBF1-206	ENST00000423161	HLA-DMB	P28068	263 aa		13.39	□□□□□ -0.27
SREBF1-206	ENST00000423161	PRR20E	P86478	221 aa		13.39	□□□□□ -0.27
SREBF1-206	ENST00000423161	PRR20C	P86479	221 aa		13.39	□□□□□ -0.27
SREBF1-206	ENST00000423161	PRR20D	P86480	221 aa		13.39	□□□□□ -0.27
SREBF1-206	ENST00000423161	PRR20B	P86481	221 aa		13.39	□□□□□ -0.27
SREBF1-206	ENST00000423161	PRR20A	P86496	221 aa		13.39	□□□□□ -0.27
SREBF1-206	ENST00000423161	SCP2D1	Q9UJQ7	156 aa		13.39	□□□□□ -0.27
SREBF1-206	ENST00000423161	TBC1D24	Q9ULP9	559 aa		13.39	□□□□□ -0.27
SREBF1-206	ENST00000423161	APLN	Q9ULZ1	77 aa		13.39	□□□□□ -0.27
SREBF1-206	ENST00000423161	FAM90A26	D6RGX4	464 aa		13.38	□□□□□ -0.27
SREBF1-206	ENST00000423161	SNRPD3	P62318	126 aa	Known RBP	13.38	□□□□□ -0.27
SREBF1-206	ENST00000423161	SIGLEC15	Q6ZMC9	328 aa		13.38	□□□□□ -0.27
SREBF1-206	ENST00000423161	CSNK1G2-AS1	Q8NCQ2	148 aa		13.38	□□□□□ -0.27
SREBF1-206	ENST00000423161	DYNC2LI1	Q8TCX1	351 aa		13.38	□□□□□ -0.27
SREBF1-206	ENST00000423161	RAB2B	Q8WUD1	216 aa		13.38	□□□□□ -0.27
SREBF1-206	ENST00000423161	SCGB3A2	Q96PL1	93 aa		13.38	□□□□□ -0.27
SREBF1-206	ENST00000423161	NRN1	Q9NPD7	142 aa		13.38	□□□□□ -0.27
SREBF1-206	ENST00000423161		U3KQ87	197 aa		13.38	□□□□□ -0.27
SREBF1-206	ENST00000423161	ELOA3C	A0A087WX78	387 aa	Predicted RBP	13.37	□□□□□ -0.27
SREBF1-206	ENST00000423161		A0A0B4J2A0	478 aa		13.37	□□□□□ -0.27
SREBF1-206	ENST00000423161	BUB3	O43684	328 aa		13.37	□□□□□ -0.27
SREBF1-206	ENST00000423161	PSG1	P11464	419 aa		13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms