RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 C16orf54Q6UWD8 224 aa7.23□□□□□ -1.25
TNFAIP3-202ENST00000420009 TBC1D26Q86UD7 250 aa7.23□□□□□ -1.25
TNFAIP3-202ENST00000420009 OR5H2Q8NGV7 314 aa7.23□□□□□ -1.25
TNFAIP3-202ENST00000420009 OR6F1Q8NGZ6 308 aa7.23□□□□□ -1.25
TNFAIP3-202ENST00000420009 NIPSNAP3BQ9BS92 247 aa7.23□□□□□ -1.25
TNFAIP3-202ENST00000420009 SSR3Q9UNL2 185 aa7.23□□□□□ -1.25
TNFAIP3-202ENST00000420009 HLA-DRB4X5D2U9 266 aa7.23□□□□□ -1.25
TNFAIP3-202ENST00000420009 P0C879 139 aa7.22□□□□□ -1.25
TNFAIP3-202ENST00000420009 PSMB9P28065 219 aa7.22□□□□□ -1.25
TNFAIP3-202ENST00000420009 OPRK1P41145 380 aa7.22□□□□□ -1.25
TNFAIP3-202ENST00000420009 RPL5P46777 297 aaKnown RBP7.22□□□□□ -1.25
TNFAIP3-202ENST00000420009 AP2S1P53680 142 aaPredicted RBP7.22□□□□□ -1.25
TNFAIP3-202ENST00000420009 GABARAPL2P60520 117 aa7.22□□□□□ -1.25
TNFAIP3-202ENST00000420009 SNRPD3P62318 126 aaKnown RBP7.22□□□□□ -1.25
TNFAIP3-202ENST00000420009 BSXQ3C1V8 233 aa7.22□□□□□ -1.25
TNFAIP3-202ENST00000420009 TMEM88Q6PEY1 159 aa7.22□□□□□ -1.25
TNFAIP3-202ENST00000420009 SLC35G3Q8N808 338 aa7.22□□□□□ -1.25
TNFAIP3-202ENST00000420009 TMEM230Q96A57 120 aa7.22□□□□□ -1.25
TNFAIP3-202ENST00000420009 RNF167Q9H6Y7 350 aa7.22□□□□□ -1.25
TNFAIP3-202ENST00000420009 NRN1Q9NPD7 142 aa7.22□□□□□ -1.25
TNFAIP3-202ENST00000420009 RFNGQ9Y644 331 aa7.22□□□□□ -1.25
TNFAIP3-202ENST00000420009 A0A0B4J293 547 aa7.21□□□□□ -1.26
TNFAIP3-202ENST00000420009 SCGB2A1O75556 95 aa7.21□□□□□ -1.26
TNFAIP3-202ENST00000420009 IGKV1-5P01602 117 aa7.21□□□□□ -1.26
TNFAIP3-202ENST00000420009 IGLC1P0CG04 106 aa7.21□□□□□ -1.26
TNFAIP3-202ENST00000420009 S100GP29377 79 aa7.21□□□□□ -1.26
TNFAIP3-202ENST00000420009 HRH1P35367 487 aa7.21□□□□□ -1.26
TNFAIP3-202ENST00000420009 MLANAQ16655 118 aa7.21□□□□□ -1.26
TNFAIP3-202ENST00000420009 TIGITQ495A1 244 aa7.21□□□□□ -1.26
TNFAIP3-202ENST00000420009 LPCAT3Q6P1A2 487 aa7.21□□□□□ -1.26
TNFAIP3-202ENST00000420009 LYSMD2Q8IV50 215 aa7.21□□□□□ -1.26
TNFAIP3-202ENST00000420009 CNBD2Q96M20 576 aa7.21□□□□□ -1.26
TNFAIP3-202ENST00000420009 SCRT2Q9NQ03 307 aa7.21□□□□□ -1.26
TNFAIP3-202ENST00000420009 FAT1Q14517 4588 aa7.2□□□□□ -1.26
TNFAIP3-202ENST00000420009 TRAV30A0A087WSZ9 112 aa7.2□□□□□ -1.26
TNFAIP3-202ENST00000420009 A6NJY4 79 aa7.2□□□□□ -1.26
TNFAIP3-202ENST00000420009 TMEM127O75204 238 aa7.2□□□□□ -1.26
TNFAIP3-202ENST00000420009 HNRNPCP07910 306 aaKnown RBP eCLIP7.2□□□□□ -1.26
TNFAIP3-202ENST00000420009 HTN3P15516 51 aa7.2□□□□□ -1.26
TNFAIP3-202ENST00000420009 NKX2-1P43699 371 aaPredicted RBP7.2□□□□□ -1.26
TNFAIP3-202ENST00000420009 SUB1P53999 127 aaKnown RBP eCLIP7.2□□□□□ -1.26
TNFAIP3-202ENST00000420009 UCP3P55916 312 aa7.2□□□□□ -1.26
TNFAIP3-202ENST00000420009 TAS2R20P59543 309 aa7.2□□□□□ -1.26
TNFAIP3-202ENST00000420009 USF2Q15853 346 aaPredicted RBP7.2□□□□□ -1.26
TNFAIP3-202ENST00000420009 GDF5OSQ5U4N7 250 aa7.2□□□□□ -1.26
TNFAIP3-202ENST00000420009 IZUMO2Q6UXV1 221 aa7.2□□□□□ -1.26
TNFAIP3-202ENST00000420009 SPARTQ8N0X7 666 aa7.2□□□□□ -1.26
TNFAIP3-202ENST00000420009 C6orf223Q8N319 242 aa7.2□□□□□ -1.26
TNFAIP3-202ENST00000420009 ZNF709Q8N972 641 aa7.2□□□□□ -1.26
TNFAIP3-202ENST00000420009 ZNRF2Q8NHG8 242 aa7.2□□□□□ -1.26
TNFAIP3-202ENST00000420009 FCGR1BQ92637 280 aa7.2□□□□□ -1.26
TNFAIP3-202ENST00000420009 CLUHP3Q96NS8 147 aa7.2□□□□□ -1.26
TNFAIP3-202ENST00000420009 IGHV3OR16-12A0A075B7B8 117 aa7.19□□□□□ -1.26
TNFAIP3-202ENST00000420009 NBDYA0A0U1RRE5 68 aa7.19□□□□□ -1.26
TNFAIP3-202ENST00000420009 BUB3O43684 328 aa7.19□□□□□ -1.26
TNFAIP3-202ENST00000420009 HOXA1P49639 335 aaPredicted RBP7.19□□□□□ -1.26
TNFAIP3-202ENST00000420009 YPEL3P61236 119 aaPredicted RBP7.19□□□□□ -1.26
TNFAIP3-202ENST00000420009 TMEM69Q5SWH9 247 aa7.19□□□□□ -1.26
TNFAIP3-202ENST00000420009 C15orf53Q8NAA6 179 aa7.19□□□□□ -1.26
TNFAIP3-202ENST00000420009 OR1S2Q8NGQ3 325 aa7.19□□□□□ -1.26
TNFAIP3-202ENST00000420009 YTHDF1Q9BYJ9 559 aaKnown RBP7.19□□□□□ -1.26
TNFAIP3-202ENST00000420009 VCX3BQ9H321 246 aa7.19□□□□□ -1.26
TNFAIP3-202ENST00000420009 TMED3Q9Y3Q3 217 aa7.19□□□□□ -1.26
TNFAIP3-202ENST00000420009 YTHDF2Q9Y5A9 579 aaKnown RBP7.19□□□□□ -1.26
TNFAIP3-202ENST00000420009 LOC100506127A0A0U1RQW1 187 aa7.18□□□□□ -1.26
TNFAIP3-202ENST00000420009 PAX4O43316 350 aa7.18□□□□□ -1.26
TNFAIP3-202ENST00000420009 HLA-DMAP28067 261 aa7.18□□□□□ -1.26
TNFAIP3-202ENST00000420009 ETV6P41212 452 aa7.18□□□□□ -1.26
TNFAIP3-202ENST00000420009 ALDH3B2P48448 385 aa7.18□□□□□ -1.26
TNFAIP3-202ENST00000420009 HSPA13P48723 471 aa7.18□□□□□ -1.26
TNFAIP3-202ENST00000420009 AKR1C2P52895 323 aa7.18□□□□□ -1.26
TNFAIP3-202ENST00000420009 FXYD7P58549 80 aa7.18□□□□□ -1.26
TNFAIP3-202ENST00000420009 DEFB1P60022 68 aa7.18□□□□□ -1.26
TNFAIP3-202ENST00000420009 RND3P61587 244 aa7.18□□□□□ -1.26
TNFAIP3-202ENST00000420009 DHODHQ02127 395 aa7.18□□□□□ -1.26
TNFAIP3-202ENST00000420009 UBE2NLQ5JXB2 153 aa7.18□□□□□ -1.26
TNFAIP3-202ENST00000420009 PRSS54Q6PEW0 395 aa7.18□□□□□ -1.26
TNFAIP3-202ENST00000420009 SIGLEC15Q6ZMC9 328 aa7.18□□□□□ -1.26
TNFAIP3-202ENST00000420009 C1orf158Q8N1D5 194 aa7.18□□□□□ -1.26
TNFAIP3-202ENST00000420009 Q8WTZ3 238 aa7.18□□□□□ -1.26
TNFAIP3-202ENST00000420009 S100A16Q96FQ6 103 aaKnown RBP7.18□□□□□ -1.26
TNFAIP3-202ENST00000420009 PDCD10Q9BUL8 212 aa7.18□□□□□ -1.26
TNFAIP3-202ENST00000420009 SAV1Q9H4B6 383 aaPredicted RBP7.18□□□□□ -1.26
TNFAIP3-202ENST00000420009 MYCBP2O75592 4640 aa7.17□□□□□ -1.26
TNFAIP3-202ENST00000420009 LOC102723971A0A1B0GUV8 181 aa7.17□□□□□ -1.26
TNFAIP3-202ENST00000420009 RPS10-NUDT3A0A1W2PQS6 291 aa7.17□□□□□ -1.26
TNFAIP3-202ENST00000420009 GSTZ1O43708 216 aaPredicted RBP7.17□□□□□ -1.26
TNFAIP3-202ENST00000420009 IGKV3-20P01619 116 aa7.17□□□□□ -1.26
TNFAIP3-202ENST00000420009 IL4P05112 153 aa7.17□□□□□ -1.26
TNFAIP3-202ENST00000420009 OR10J1P30954 320 aa7.17□□□□□ -1.26
TNFAIP3-202ENST00000420009 PRSS3P35030 304 aa7.17□□□□□ -1.26
TNFAIP3-202ENST00000420009 RND2P52198 227 aa7.17□□□□□ -1.26
TNFAIP3-202ENST00000420009 TSPAN5P62079 268 aa7.17□□□□□ -1.26
TNFAIP3-202ENST00000420009 ZNF79Q15937 498 aa7.17□□□□□ -1.26
TNFAIP3-202ENST00000420009 AARDQ4LEZ3 155 aa7.17□□□□□ -1.26
TNFAIP3-202ENST00000420009 FOXI2Q6ZQN5 318 aa7.17□□□□□ -1.26
TNFAIP3-202ENST00000420009 GPX8Q8TED1 209 aa7.17□□□□□ -1.26
TNFAIP3-202ENST00000420009 TP53RKQ96S44 253 aa7.17□□□□□ -1.26
TNFAIP3-202ENST00000420009 ATG101Q9BSB4 218 aa7.17□□□□□ -1.26
TNFAIP3-202ENST00000420009 SLC35B3Q9H1N7 401 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms