RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 ZNF846Q147U1 533 aa6.96□□□□□ -1.3
NUP50-205ENST00000419387 ZNF600Q6ZNG1 722 aa6.96□□□□□ -1.3
NUP50-205ENST00000419387 TCF24Q7RTU0 167 aa6.96□□□□□ -1.3
NUP50-205ENST00000419387 SELENOHQ8IZQ5 122 aaKnown RBP6.96□□□□□ -1.3
NUP50-205ENST00000419387 LILRB2Q8N423 598 aa6.96□□□□□ -1.3
NUP50-205ENST00000419387 GBGT1Q8N5D6 347 aa6.96□□□□□ -1.3
NUP50-205ENST00000419387 ST8SIA2Q92186 375 aa6.96□□□□□ -1.3
NUP50-205ENST00000419387 SLC25A21Q9BQT8 299 aaPredicted RBP6.96□□□□□ -1.3
NUP50-205ENST00000419387 TMEM222Q9H0R3 208 aa6.96□□□□□ -1.3
NUP50-205ENST00000419387 CSTL1Q9H114 145 aa6.96□□□□□ -1.3
NUP50-205ENST00000419387 VSIRQ9H7M9 311 aa6.96□□□□□ -1.3
NUP50-205ENST00000419387 NAA60Q9H7X0 242 aa6.96□□□□□ -1.3
NUP50-205ENST00000419387 PRR13Q9NZ81 148 aa6.96□□□□□ -1.3
NUP50-205ENST00000419387 C14orf166Q9Y224 244 aaKnown RBP6.96□□□□□ -1.3
NUP50-205ENST00000419387 PUS1Q9Y606 427 aaKnown RBP eCLIP6.96□□□□□ -1.3
NUP50-205ENST00000419387 TMEM56-RWDD3S4R434 201 aa6.96□□□□□ -1.3
NUP50-205ENST00000419387 CXorf65A6NEN9 183 aa6.95□□□□□ -1.3
NUP50-205ENST00000419387 NAP1L6A6NFF2 107 aa6.95□□□□□ -1.3
NUP50-205ENST00000419387 DNASE2O00115 360 aaPredicted RBP6.95□□□□□ -1.3
NUP50-205ENST00000419387 LYRM1O43325 122 aa6.95□□□□□ -1.3
NUP50-205ENST00000419387 CLN5O75503 358 aa6.95□□□□□ -1.3
NUP50-205ENST00000419387 APOHP02749 345 aaPredicted RBP6.95□□□□□ -1.3
NUP50-205ENST00000419387 ATF4P18848 351 aaPredicted RBP6.95□□□□□ -1.3
NUP50-205ENST00000419387 FAUP35544 74 aaKnown RBP6.95□□□□□ -1.3
NUP50-205ENST00000419387 PMS2P11Q13670 270 aa6.95□□□□□ -1.3
NUP50-205ENST00000419387 ZNF124Q15973 351 aa6.95□□□□□ -1.3
NUP50-205ENST00000419387 MLANAQ16655 118 aa6.95□□□□□ -1.3
NUP50-205ENST00000419387 TMEM128Q5BJH2 165 aa6.95□□□□□ -1.3
NUP50-205ENST00000419387 TRIQKQ629K1 86 aa6.95□□□□□ -1.3
NUP50-205ENST00000419387 FAM219AQ8IW50 185 aa6.95□□□□□ -1.3
NUP50-205ENST00000419387 OR52E5Q8NH55 327 aa6.95□□□□□ -1.3
NUP50-205ENST00000419387 RNASE11Q8TAA1 199 aaKnown RBP6.95□□□□□ -1.3
NUP50-205ENST00000419387 C7orf50Q9BRJ6 194 aaKnown RBP6.95□□□□□ -1.3
NUP50-205ENST00000419387 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.95□□□□□ -1.3
NUP50-205ENST00000419387 BIRC6Q9NR09 4857 aa6.95□□□□□ -1.3
NUP50-205ENST00000419387 ALMS1Q8TCU4 4167 aa6.94□□□□□ -1.3
NUP50-205ENST00000419387 TRAV2A0A0B4J234 112 aa6.94□□□□□ -1.3
NUP50-205ENST00000419387 A0A1B0GU03 582 aa6.94□□□□□ -1.3
NUP50-205ENST00000419387 SCO2A0A1W2PP80 73 aa6.94□□□□□ -1.3
NUP50-205ENST00000419387 A0A1W2PS18 150 aa6.94□□□□□ -1.3
NUP50-205ENST00000419387 NUPR2A6NF83 97 aa6.94□□□□□ -1.3
NUP50-205ENST00000419387 MPTX1A8MV57 137 aa6.94□□□□□ -1.3
NUP50-205ENST00000419387 DFFBO76075 338 aa6.94□□□□□ -1.3
NUP50-205ENST00000419387 AKR1C4P17516 323 aa6.94□□□□□ -1.3
NUP50-205ENST00000419387 NPPCP23582 126 aa6.94□□□□□ -1.3
NUP50-205ENST00000419387 OPRK1P41145 380 aa6.94□□□□□ -1.3
NUP50-205ENST00000419387 SPCS3P61009 180 aa6.94□□□□□ -1.3
NUP50-205ENST00000419387 RPL11P62913 178 aaKnown RBP6.94□□□□□ -1.3
NUP50-205ENST00000419387 ASAH1Q13510 395 aa6.94□□□□□ -1.3
NUP50-205ENST00000419387 RBMS2Q15434 407 aaKnown RBP6.94□□□□□ -1.3
NUP50-205ENST00000419387 BSXQ3C1V8 233 aa6.94□□□□□ -1.3
NUP50-205ENST00000419387 AARDQ4LEZ3 155 aa6.94□□□□□ -1.3
NUP50-205ENST00000419387 CEMP1Q6PRD7 247 aaPredicted RBP6.94□□□□□ -1.3
NUP50-205ENST00000419387 TMEM217Q8N7C4 229 aa6.94□□□□□ -1.3
NUP50-205ENST00000419387 OR4X1Q8NH49 305 aa6.94□□□□□ -1.3
NUP50-205ENST00000419387 GATAD1Q8WUU5 269 aa6.94□□□□□ -1.3
NUP50-205ENST00000419387 RBPMSQ93062 196 aaKnown RBP6.94□□□□□ -1.3
NUP50-205ENST00000419387 SCGB3A2Q96PL1 93 aa6.94□□□□□ -1.3
NUP50-205ENST00000419387 WDR12Q9GZL7 423 aaKnown RBP6.94□□□□□ -1.3
NUP50-205ENST00000419387 MS4A6AQ9H2W1 248 aa6.94□□□□□ -1.3
NUP50-205ENST00000419387 FNDC4Q9H6D8 234 aaPredicted RBP6.94□□□□□ -1.3
NUP50-205ENST00000419387 TMEM231Q9H6L2 316 aa6.94□□□□□ -1.3
NUP50-205ENST00000419387 MRPL36Q9P0J6 103 aaKnown RBP6.94□□□□□ -1.3
NUP50-205ENST00000419387 TRAV30A0A087WSZ9 112 aa6.93□□□□□ -1.3
NUP50-205ENST00000419387 IGHV3-66A0A0C4DH42 116 aa6.93□□□□□ -1.3
NUP50-205ENST00000419387 SCGB2A1O75556 95 aa6.93□□□□□ -1.3
NUP50-205ENST00000419387 TCRBP04435 133 aa6.93□□□□□ -1.3
NUP50-205ENST00000419387 CRYBB3P26998 211 aa6.93□□□□□ -1.3
NUP50-205ENST00000419387 HTR2BP41595 481 aa6.93□□□□□ -1.3
NUP50-205ENST00000419387 DEFB131AP59861 70 aa6.93□□□□□ -1.3
NUP50-205ENST00000419387 PPP1R1AQ13522 171 aa6.93□□□□□ -1.3
NUP50-205ENST00000419387 LCE3BQ5TA77 95 aa6.93□□□□□ -1.3
NUP50-205ENST00000419387 LYZL2Q7Z4W2 148 aa6.93□□□□□ -1.3
NUP50-205ENST00000419387 LRTM2Q8N967 370 aa6.93□□□□□ -1.3
NUP50-205ENST00000419387 LINC00476Q8WZB0 136 aa6.93□□□□□ -1.3
NUP50-205ENST00000419387 GPR146Q96CH1 333 aa6.93□□□□□ -1.3
NUP50-205ENST00000419387 RARRES2Q99969 163 aa6.93□□□□□ -1.3
NUP50-205ENST00000419387 HEYLQ9NQ87 328 aaPredicted RBP6.93□□□□□ -1.3
NUP50-205ENST00000419387 RPS10-NUDT3A0A1W2PQS6 291 aa6.92□□□□□ -1.3
NUP50-205ENST00000419387 C9orf170A2RU37 121 aa6.92□□□□□ -1.3
NUP50-205ENST00000419387 SFT2D2O95562 160 aa6.92□□□□□ -1.3
NUP50-205ENST00000419387 LY6G6CO95867 125 aa6.92□□□□□ -1.3
NUP50-205ENST00000419387 IGKV1-17P01599 117 aa6.92□□□□□ -1.3
NUP50-205ENST00000419387 ANXA7P20073 488 aaKnown RBP6.92□□□□□ -1.3
NUP50-205ENST00000419387 TIGITQ495A1 244 aa6.92□□□□□ -1.3
NUP50-205ENST00000419387 C2orf83Q53S99 150 aa6.92□□□□□ -1.3
NUP50-205ENST00000419387 NMSQ5H8A3 153 aa6.92□□□□□ -1.3
NUP50-205ENST00000419387 TMEM268Q5VZI3 342 aa6.92□□□□□ -1.3
NUP50-205ENST00000419387 TMED4Q7Z7H5 227 aa6.92□□□□□ -1.3
NUP50-205ENST00000419387 CENPSQ8N2Z9 138 aa6.92□□□□□ -1.3
NUP50-205ENST00000419387 FAM24BQ8N5W8 94 aa6.92□□□□□ -1.3
NUP50-205ENST00000419387 METTL26Q96S19 204 aa6.92□□□□□ -1.3
NUP50-205ENST00000419387 CACNG5Q9UF02 275 aa6.92□□□□□ -1.3
NUP50-205ENST00000419387 RABAC1Q9UI14 185 aa6.92□□□□□ -1.3
NUP50-205ENST00000419387 KCNIP3Q9Y2W7 256 aa6.92□□□□□ -1.3
NUP50-205ENST00000419387 KLK5Q9Y337 293 aaPredicted RBP6.92□□□□□ -1.3
NUP50-205ENST00000419387 CEBPZOSA8MTT3 80 aa6.91□□□□□ -1.3
NUP50-205ENST00000419387 PITX3O75364 302 aa6.91□□□□□ -1.3
NUP50-205ENST00000419387 CA1P00915 261 aaPredicted RBP6.91□□□□□ -1.3
NUP50-205ENST00000419387 OR4E1P0C645 316 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms