RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 ERVK11-1P61568 191 aa9.99□□□□□ -0.81
UBR4-205ENST00000417040 CCL19Q99731 98 aa9.99□□□□□ -0.81
UBR4-205ENST00000417040 A0A1B0GW15 77 aa9.99□□□□□ -0.81
UBR4-205ENST00000417040 ESDP10768 282 aa9.99□□□□□ -0.81
UBR4-205ENST00000417040 RAB9AP51151 201 aa9.99□□□□□ -0.81
UBR4-205ENST00000417040 HSD52Q0P140 79 aa9.99□□□□□ -0.81
UBR4-205ENST00000417040 IGFL4Q6B9Z1 124 aa9.99□□□□□ -0.81
UBR4-205ENST00000417040 SMKR1H3BMG3 65 aa9.99□□□□□ -0.81
UBR4-205ENST00000417040 STARD6P59095 220 aa9.99□□□□□ -0.81
UBR4-205ENST00000417040 FAM89BQ8N5H3 189 aa9.99□□□□□ -0.81
UBR4-205ENST00000417040 TRBV24-1A0A075B6N3 115 aa9.99□□□□□ -0.81
UBR4-205ENST00000417040 A0A1W2PR77 199 aa9.99□□□□□ -0.81
UBR4-205ENST00000417040 A8MWV9 139 aa9.99□□□□□ -0.81
UBR4-205ENST00000417040 TM4SF5O14894 197 aa9.99□□□□□ -0.81
UBR4-205ENST00000417040 TDGF1P3P51864 188 aa9.99□□□□□ -0.81
UBR4-205ENST00000417040 C10orf55Q5SWW7 151 aa9.99□□□□□ -0.81
UBR4-205ENST00000417040 LINC01551Q86U37 167 aa9.99□□□□□ -0.81
UBR4-205ENST00000417040 DOCK4Q8N1I0 1966 aa9.99□□□□□ -0.81
UBR4-205ENST00000417040 BRWD1Q9NSI6 2320 aa9.99□□□□□ -0.81
UBR4-205ENST00000417040 PINLYPA6NC86 204 aa9.99□□□□□ -0.81
UBR4-205ENST00000417040 TCRAP04437 139 aa9.99□□□□□ -0.81
UBR4-205ENST00000417040 MPZP25189 248 aa9.99□□□□□ -0.81
UBR4-205ENST00000417040 C9JQL5 133 aa9.98□□□□□ -0.81
UBR4-205ENST00000417040 CACNG8Q8WXS5 425 aa9.98□□□□□ -0.81
UBR4-205ENST00000417040 Q6AWC8 147 aa9.98□□□□□ -0.81
UBR4-205ENST00000417040 TMEM242Q9NWH2 141 aa9.98□□□□□ -0.81
UBR4-205ENST00000417040 ATP5J2P56134 94 aa9.98□□□□□ -0.81
UBR4-205ENST00000417040 NUP35Q8NFH5 326 aa9.98□□□□□ -0.81
UBR4-205ENST00000417040 RNF125Q96EQ8 232 aa9.98□□□□□ -0.81
UBR4-205ENST00000417040 DPM3Q9P2X0 92 aa9.98□□□□□ -0.81
UBR4-205ENST00000417040 LINC00527Q9UJ94 153 aa9.98□□□□□ -0.81
UBR4-205ENST00000417040 HTN3P15516 51 aa9.98□□□□□ -0.81
UBR4-205ENST00000417040 APOBEC3AP31941 199 aaPredicted RBP9.98□□□□□ -0.81
UBR4-205ENST00000417040 RPL15P61313 204 aaKnown RBP9.98□□□□□ -0.81
UBR4-205ENST00000417040 C9orf106Q8NAJ2 232 aa9.98□□□□□ -0.81
UBR4-205ENST00000417040 A0A0G2JMZ2 1700 aa9.98□□□□□ -0.81
UBR4-205ENST00000417040 LRRC37A2A6NM11 1700 aa9.98□□□□□ -0.81
UBR4-205ENST00000417040 LRRC37AA6NMS7 1700 aa9.98□□□□□ -0.81
UBR4-205ENST00000417040 RBMY1BA6NDE4 496 aaKnown RBP9.97□□□□□ -0.81
UBR4-205ENST00000417040 RBMY1EA6NEQ0 496 aaKnown RBP9.97□□□□□ -0.81
UBR4-205ENST00000417040 EFEMP2O95967 443 aa9.97□□□□□ -0.81
UBR4-205ENST00000417040 RBMY1DP0C7P1 496 aaKnown RBP9.97□□□□□ -0.81
UBR4-205ENST00000417040 RBMY1A1P0DJD3 496 aaKnown RBP9.97□□□□□ -0.81
UBR4-205ENST00000417040 RBMY1CP0DJD4 496 aa9.97□□□□□ -0.81
UBR4-205ENST00000417040 CCL1P22362 96 aa9.97□□□□□ -0.81
UBR4-205ENST00000417040 DUTP33316 252 aaKnown RBP9.97□□□□□ -0.81
UBR4-205ENST00000417040 GGTLC1Q9BX51 225 aa9.97□□□□□ -0.81
UBR4-205ENST00000417040 RPUSD1Q9UJJ7 312 aaKnown RBP9.97□□□□□ -0.81
UBR4-205ENST00000417040 TP53BP1Q12888 1972 aaPredicted RBP9.97□□□□□ -0.81
UBR4-205ENST00000417040 PRR19A6NJB7 356 aa9.97□□□□□ -0.81
UBR4-205ENST00000417040 MLNRO43193 412 aa9.97□□□□□ -0.81
UBR4-205ENST00000417040 CD28P10747 220 aa9.97□□□□□ -0.81
UBR4-205ENST00000417040 GLRXP35754 106 aa9.97□□□□□ -0.81
UBR4-205ENST00000417040 H7C1H1 209 aa9.97□□□□□ -0.81
UBR4-205ENST00000417040 FOXG1P55316 489 aaPredicted RBP9.97□□□□□ -0.81
UBR4-205ENST00000417040 ATP5IP56385 69 aaPredicted RBP9.97□□□□□ -0.81
UBR4-205ENST00000417040 RPP25LQ8N5L8 163 aaKnown RBP9.97□□□□□ -0.81
UBR4-205ENST00000417040 POLR3KQ9Y2Y1 108 aaPredicted RBP9.97□□□□□ -0.81
UBR4-205ENST00000417040 ZFAND6Q6FIF0 208 aa9.97□□□□□ -0.81
UBR4-205ENST00000417040 LOC285556D6RIA3 1793 aa9.97□□□□□ -0.81
UBR4-205ENST00000417040 YPEL1O60688 119 aa9.97□□□□□ -0.81
UBR4-205ENST00000417040 LYZL1Q6UWQ5 148 aa9.97□□□□□ -0.81
UBR4-205ENST00000417040 YPEL2Q96QA6 119 aa9.97□□□□□ -0.81
UBR4-205ENST00000417040 GBF1Q92538 1859 aa9.97□□□□□ -0.81
UBR4-205ENST00000417040 IFI27P40305 119 aaPredicted RBP9.96□□□□□ -0.81
UBR4-205ENST00000417040 UBE2V1Q13404 147 aa9.96□□□□□ -0.81
UBR4-205ENST00000417040 OCIAD2Q56VL3 154 aa9.96□□□□□ -0.81
UBR4-205ENST00000417040 ASPHD1Q5U4P2 390 aa9.96□□□□□ -0.81
UBR4-205ENST00000417040 FGF11Q92914 225 aa9.96□□□□□ -0.81
UBR4-205ENST00000417040 B9A039 149 aa9.96□□□□□ -0.81
UBR4-205ENST00000417040 SELLP14151 372 aa9.96□□□□□ -0.81
UBR4-205ENST00000417040 ZNF474Q6S9Z5 364 aaPredicted RBP9.96□□□□□ -0.81
UBR4-205ENST00000417040 ATP5L2Q7Z4Y8 100 aa9.96□□□□□ -0.81
UBR4-205ENST00000417040 PMS2P5A8MQ11 134 aa9.96□□□□□ -0.81
UBR4-205ENST00000417040 KIR3DS1Q14943 382 aa9.96□□□□□ -0.81
UBR4-205ENST00000417040 FLVCR1-AS1Q8TAF5 88 aa9.96□□□□□ -0.81
UBR4-205ENST00000417040 AGMATQ9BSE5 352 aa9.96□□□□□ -0.81
UBR4-205ENST00000417040 PRDM6Q9NQX0 595 aa9.96□□□□□ -0.81
UBR4-205ENST00000417040 GREB1Q4ZG55 1949 aa9.96□□□□□ -0.82
UBR4-205ENST00000417040 TRAV8-1A0A0A6YYK1 113 aa9.96□□□□□ -0.82
UBR4-205ENST00000417040 SEC11AP67812 179 aa9.96□□□□□ -0.82
UBR4-205ENST00000417040 RNF182Q8N6D2 247 aa9.96□□□□□ -0.82
UBR4-205ENST00000417040 LINC00312Q9Y6C7 94 aa9.96□□□□□ -0.82
UBR4-205ENST00000417040 LINC00271P0C7V0 271 aa9.96□□□□□ -0.82
UBR4-205ENST00000417040 LAGE3Q14657 143 aa9.96□□□□□ -0.82
UBR4-205ENST00000417040 TMEM30BQ3MIR4 351 aa9.96□□□□□ -0.82
UBR4-205ENST00000417040 SLC25A15Q9Y619 301 aa9.96□□□□□ -0.82
UBR4-205ENST00000417040 METRNQ9UJH8 293 aa9.95□□□□□ -0.82
UBR4-205ENST00000417040 LHFPL1Q86WI0 220 aa9.95□□□□□ -0.82
UBR4-205ENST00000417040 WDR83OSQ9Y284 106 aa9.95□□□□□ -0.82
UBR4-205ENST00000417040 NRXN2Q9P2S2 1712 aa9.95□□□□□ -0.82
UBR4-205ENST00000417040 IGKV1-5P01602 117 aa9.95□□□□□ -0.82
UBR4-205ENST00000417040 HIST1H4AP62805 103 aaKnown RBP9.95□□□□□ -0.82
UBR4-205ENST00000417040 PRCDQ00LT1 54 aa9.95□□□□□ -0.82
UBR4-205ENST00000417040 PSG3Q16557 428 aa9.95□□□□□ -0.82
UBR4-205ENST00000417040 TMEM42Q69YG0 159 aa9.95□□□□□ -0.82
UBR4-205ENST00000417040 EFNA2O43921 213 aa9.95□□□□□ -0.82
UBR4-205ENST00000417040 C8orf46Q8TAG6 207 aa9.95□□□□□ -0.82
UBR4-205ENST00000417040 PLXNA1Q9UIW2 1896 aa9.95□□□□□ -0.82
UBR4-205ENST00000417040 GAGE12BA1L429 117 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms