RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 BANF2Q9H503 90 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 FNDC4Q9H6D8 234 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 JPT2Q9H910 190 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 TMEM106BQ9NUM4 274 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 MCTS1Q9ULC4 181 aaKnown RBP2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 KLF12Q9Y4X4 402 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 LHFPL6Q9Y693 200 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 PXMP4Q9Y6I8 212 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 ARL2-SNX15V9GYD0 113 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 EP400Q96L91 3159 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 HEATR5AQ86XA9 2040 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 CPAMD8Q8IZJ3 1885 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 CTXND1A0A1B0GTU2 59 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR5B21A6NL26 309 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 ZNF705GA8MUZ8 300 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 C5orf67F2Z3F1 127 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 F6UZH7 168 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 FCN1O00602 326 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 DEGS1O15121 323 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 MRPS12O15235 138 aaKnown RBP2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 YPEL1O60688 119 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 ZNF737O75373 536 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 FOXH1O75593 365 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 KLF8O95600 359 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 MT-CO2P00403 227 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 HPRT1P00492 218 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 NRASP01111 189 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 KRASP01116 189 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 PPYP01298 95 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 MT-ND6P03923 174 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR10J4P0C629 311 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 PVRP15151 417 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 BRS3P32247 399 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 LGALS7P47929 136 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 DYNLT3P51808 116 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 BIDP55957 195 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 RPL23P62829 140 aaKnown RBP2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 RPL8P62917 257 aaKnown RBP2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 PSG4Q00888 419 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 TGFBR3Q03167 851 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 FMODQ06828 376 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 PLCXD2Q0VAA5 305 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 Q0VG73 95 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR5I1Q13606 314 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 TCEAL5Q5H9L2 206 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 FAM162BQ5T6X4 162 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 ADAMTSL5Q6ZMM2 481 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 OSR2Q8N2R0 312 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 ZADH2Q8N4Q0 377 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 TMEM86BQ8N661 226 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 GATD1Q8NB37 220 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR1K1Q8NGR3 316 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 DOK4Q8TEW6 326 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR5P3Q8WZ94 311 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 SPTSSAQ969W0 71 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 C11orf52Q96A22 123 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 SIGLEC12Q96PQ1 595 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 YPEL2Q96QA6 119 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 SIGMAR1Q99720 223 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 RASL11BQ9BPW5 248 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 SMIM7Q9BQ49 75 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 PRO1933Q9H354 126 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 SPANXB1Q9NS25 103 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 SLC39A9Q9NUM3 307 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 THYN1Q9P016 225 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 GNG13Q9P2W3 67 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 PRO0628Q9UI54 55 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 POLR1DQ9Y2S0 133 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 SIGLEC9Q9Y336 463 aa2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 MRPS16Q9Y3D3 137 aaKnown RBP2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 COL5A1P20908 1838 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P23-201ENST00000414981 TET1Q8NFU7 2136 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 NKX2-6A6NCS4 301 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 FAM24AA6NFZ4 105 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 KLLNB2CW77 178 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 C17orf112F2Z3M2 114 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 CCL21O00585 134 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 CRXO43186 299 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 TNFSF12O43508 249 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 TRAF3IP2O43734 574 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 SYNGR2O43760 224 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 NAPSAO96009 420 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 IGLV3-19P01714 112 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 CTSEP14091 401 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 KLK2P20151 261 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 COX5AP20674 150 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 SAA4P35542 130 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 TFPI2P48307 235 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 RBM11P57052 281 aaKnown RBP2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 PCBD1P61457 104 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 PPP1CBP62140 327 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 PMCHL1Q16048 86 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 TMEM97Q5BJF2 176 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 FAM78AQ5JUQ0 283 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 FAM27BQ5VT28 67 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 LEMD1Q68G75 181 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 RASL11AQ6T310 242 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 MOB1BQ7L9L4 216 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms