RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 NPIPB3Q92617 1050 aa16.89■□□□□ 0.29
PTCD3-203ENST00000409783 C20orf24Q9BUV8 137 aa16.89■□□□□ 0.29
PTCD3-203ENST00000409783 TECRQ9NZ01 308 aaKnown RBP16.89■□□□□ 0.29
PTCD3-203ENST00000409783 LSM4Q9Y4Z0 139 aaKnown RBP16.89■□□□□ 0.29
PTCD3-203ENST00000409783 TRAV30A0A087WSZ9 112 aa16.88■□□□□ 0.29
PTCD3-203ENST00000409783 RPP30P78346 268 aaKnown RBP16.88■□□□□ 0.29
PTCD3-203ENST00000409783 GAMTQ14353 236 aa16.88■□□□□ 0.29
PTCD3-203ENST00000409783 RAB40CQ96S21 281 aa16.88■□□□□ 0.29
PTCD3-203ENST00000409783 C11orf1Q9H5F2 150 aa16.88■□□□□ 0.29
PTCD3-203ENST00000409783 PSENENQ9NZ42 101 aa16.88■□□□□ 0.29
PTCD3-203ENST00000409783 STRAPQ9Y3F4 350 aaKnown RBP16.88■□□□□ 0.29
PTCD3-203ENST00000409783 PUS1Q9Y606 427 aaKnown RBP eCLIP16.88■□□□□ 0.29
PTCD3-203ENST00000409783 PMS2P5A8MQ11 134 aa16.87■□□□□ 0.29
PTCD3-203ENST00000409783 ZNF207O43670 478 aaKnown RBP16.87■□□□□ 0.29
PTCD3-203ENST00000409783 LCN12Q6JVE5 192 aa16.87■□□□□ 0.29
PTCD3-203ENST00000409783 GSG1LQ6UXU4 331 aa16.87■□□□□ 0.29
PTCD3-203ENST00000409783 OR1S2Q8NGQ3 325 aa16.87■□□□□ 0.29
PTCD3-203ENST00000409783 DYNLRB2Q8TF09 96 aa16.87■□□□□ 0.29
PTCD3-203ENST00000409783 ACY3Q96HD9 319 aa16.87■□□□□ 0.29
PTCD3-203ENST00000409783 PAIP2BQ9ULR5 123 aaKnown RBP16.87■□□□□ 0.29
PTCD3-203ENST00000409783 SELENOKQ9Y6D0 94 aa16.87■□□□□ 0.29
PTCD3-203ENST00000409783 C7orf66A4D0T2 115 aa16.86■□□□□ 0.29
PTCD3-203ENST00000409783 ZNF785A8K8V0 405 aa16.86■□□□□ 0.29
PTCD3-203ENST00000409783 K7EPK0 472 aa16.86■□□□□ 0.29
PTCD3-203ENST00000409783 YIF1AO95070 293 aa16.86■□□□□ 0.29
PTCD3-203ENST00000409783 OR10J1P30954 320 aa16.86■□□□□ 0.29
PTCD3-203ENST00000409783 TAS2R30P59541 319 aa16.86■□□□□ 0.29
PTCD3-203ENST00000409783 BTNL8Q6UX41 500 aa16.86■□□□□ 0.29
PTCD3-203ENST00000409783 TMEM14EPQ6UXP3 125 aa16.86■□□□□ 0.29
PTCD3-203ENST00000409783 IGKV1D-37A0A075B6S9 117 aa16.85■□□□□ 0.29
PTCD3-203ENST00000409783 YPEL3P61236 119 aaPredicted RBP16.85■□□□□ 0.29
PTCD3-203ENST00000409783 TMEM61Q8N0U2 210 aa16.85■□□□□ 0.29
PTCD3-203ENST00000409783 SMPXQ9UHP9 88 aa16.85■□□□□ 0.29
PTCD3-203ENST00000409783 IGHV7-4-1A0A0J9YVY3 117 aa16.84■□□□□ 0.29
PTCD3-203ENST00000409783 GOSR2O14653 212 aa16.84■□□□□ 0.29
PTCD3-203ENST00000409783 TSC22D2O75157 780 aa16.84■□□□□ 0.29
PTCD3-203ENST00000409783 CCNKO75909 580 aa16.84■□□□□ 0.29
PTCD3-203ENST00000409783 SCAF4O95104 1147 aaKnown RBP16.84■□□□□ 0.29
PTCD3-203ENST00000409783 SIX6O95475 246 aa16.84■□□□□ 0.29
PTCD3-203ENST00000409783 Q8N1Y9 231 aa16.84■□□□□ 0.29
PTCD3-203ENST00000409783 SLC35E1Q96K37 410 aa16.84■□□□□ 0.29
PTCD3-203ENST00000409783 SCGB2A1O75556 95 aa16.83■□□□□ 0.28
PTCD3-203ENST00000409783 WDR89Q96FK6 387 aaPredicted RBP16.83■□□□□ 0.28
PTCD3-203ENST00000409783 LSM5Q9Y4Y9 91 aaKnown RBP16.83■□□□□ 0.28
PTCD3-203ENST00000409783 IGKV1OR2-108A0A075B7D4 117 aa16.82■□□□□ 0.28
PTCD3-203ENST00000409783 TRAV14DV4A0A0A6YYC5 116 aa16.82■□□□□ 0.28
PTCD3-203ENST00000409783 CHEK1O14757 476 aa16.82■□□□□ 0.28
PTCD3-203ENST00000409783 DCTN2Q13561 401 aaKnown RBP16.82■□□□□ 0.28
PTCD3-203ENST00000409783 RAB32Q13637 225 aa16.82■□□□□ 0.28
PTCD3-203ENST00000409783 GINS3Q9BRX5 216 aa16.82■□□□□ 0.28
PTCD3-203ENST00000409783 TOMM40O96008 361 aa16.81■□□□□ 0.28
PTCD3-203ENST00000409783 APOHP02749 345 aaPredicted RBP16.81■□□□□ 0.28
PTCD3-203ENST00000409783 METTL15P1P0C7V9 234 aa16.81■□□□□ 0.28
PTCD3-203ENST00000409783 H2BFSP57053 126 aa16.81■□□□□ 0.28
PTCD3-203ENST00000409783 DEFB121Q5J5C9 76 aa16.81■□□□□ 0.28
PTCD3-203ENST00000409783 ACOT7LQ6ZUV0 252 aa16.81■□□□□ 0.28
PTCD3-203ENST00000409783 THAP8Q8NA92 274 aa16.81■□□□□ 0.28
PTCD3-203ENST00000409783 RHPN1-AS1Q9BWJ2 59 aa16.81■□□□□ 0.28
PTCD3-203ENST00000409783 ALG5Q9Y673 324 aa16.81■□□□□ 0.28
PTCD3-203ENST00000409783 IGHV3-49A0A0A0MS15 119 aa16.8■□□□□ 0.28
PTCD3-203ENST00000409783 TRAV25A0A0B4J276 109 aa16.8■□□□□ 0.28
PTCD3-203ENST00000409783 ARL16Q0P5N6 197 aa16.8■□□□□ 0.28
PTCD3-203ENST00000409783 OR8G2PQ6IF36 304 aa16.8■□□□□ 0.28
PTCD3-203ENST00000409783 Q8WTZ3 238 aa16.8■□□□□ 0.28
PTCD3-203ENST00000409783 NMES1Q9C002 83 aa16.8■□□□□ 0.28
PTCD3-203ENST00000409783 VSIRQ9H7M9 311 aa16.8■□□□□ 0.28
PTCD3-203ENST00000409783 IGHV3OR16-13A0A075B7E8 117 aa16.79■□□□□ 0.28
PTCD3-203ENST00000409783 IGHV3-74A0A0B4J1X5 117 aa16.79■□□□□ 0.28
PTCD3-203ENST00000409783 SSNA1O43805 119 aa16.79■□□□□ 0.28
PTCD3-203ENST00000409783 PSG1P11464 419 aa16.79■□□□□ 0.28
PTCD3-203ENST00000409783 CRYBB3P26998 211 aa16.79■□□□□ 0.28
PTCD3-203ENST00000409783 ZNF90Q03938 601 aa16.79■□□□□ 0.28
PTCD3-203ENST00000409783 LILRB2Q8N423 598 aa16.79■□□□□ 0.28
PTCD3-203ENST00000409783 RNF2Q99496 336 aa16.79■□□□□ 0.28
PTCD3-203ENST00000409783 TRGV9Q99603 122 aa16.79■□□□□ 0.28
PTCD3-203ENST00000409783 DNAH9Q9NYC9 4486 aa16.78■□□□□ 0.28
PTCD3-203ENST00000409783 ZFP92A6NM28 416 aa16.78■□□□□ 0.28
PTCD3-203ENST00000409783 L7N2F9 121 aa16.78■□□□□ 0.28
PTCD3-203ENST00000409783 RD3LP0DJH9 198 aa16.78■□□□□ 0.28
PTCD3-203ENST00000409783 S100A10P60903 97 aa16.78■□□□□ 0.28
PTCD3-203ENST00000409783 VAMP2P63027 116 aa16.78■□□□□ 0.28
PTCD3-203ENST00000409783 DLK1P80370 383 aa16.78■□□□□ 0.28
PTCD3-203ENST00000409783 GUCA2BQ16661 112 aa16.78■□□□□ 0.28
PTCD3-203ENST00000409783 FAM90A2PQ658T7 463 aa16.78■□□□□ 0.28
PTCD3-203ENST00000409783 ST8SIA2Q92186 375 aa16.78■□□□□ 0.28
PTCD3-203ENST00000409783 U3KQE9 123 aa16.78■□□□□ 0.28
PTCD3-203ENST00000409783 TGP01266 2768 aa16.77■□□□□ 0.28
PTCD3-203ENST00000409783 TSPAN4O14817 238 aa16.77■□□□□ 0.28
PTCD3-203ENST00000409783 NPPCP23582 126 aa16.77■□□□□ 0.28
PTCD3-203ENST00000409783 USF2Q15853 346 aaPredicted RBP16.77■□□□□ 0.28
PTCD3-203ENST00000409783 RGS21Q2M5E4 152 aa16.77■□□□□ 0.28
PTCD3-203ENST00000409783 SMAD5-AS1Q9Y6J3 95 aa16.77■□□□□ 0.28
PTCD3-203ENST00000409783 FAM24AA6NFZ4 105 aa16.76■□□□□ 0.27
PTCD3-203ENST00000409783 IL4P05112 153 aa16.76■□□□□ 0.27
PTCD3-203ENST00000409783 CD7P09564 240 aa16.76■□□□□ 0.27
PTCD3-203ENST00000409783 OXA1LQ15070 435 aa16.76■□□□□ 0.27
PTCD3-203ENST00000409783 RBPMS2Q6ZRY4 209 aaKnown RBP16.76■□□□□ 0.27
PTCD3-203ENST00000409783 TMEM144Q7Z5S9 345 aa16.76■□□□□ 0.27
PTCD3-203ENST00000409783 OR10P1Q8NGE3 313 aa16.76■□□□□ 0.27
PTCD3-203ENST00000409783 METTL26Q96S19 204 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 221 ms