RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 UBQLN2Q9UHD9 624 aa10.78□□□□□ -0.68
NIF3L1-205ENST00000409588 A0A1B0GU03 582 aa10.77□□□□□ -0.69
NIF3L1-205ENST00000409588 DUXBA0A1W2PPF3 345 aa10.77□□□□□ -0.69
NIF3L1-205ENST00000409588 DNASE2O00115 360 aaPredicted RBP10.77□□□□□ -0.69
NIF3L1-205ENST00000409588 AKR1C4P17516 323 aa10.77□□□□□ -0.69
NIF3L1-205ENST00000409588 CRYBB3P26998 211 aa10.77□□□□□ -0.69
NIF3L1-205ENST00000409588 AP2S1P53680 142 aaPredicted RBP10.77□□□□□ -0.69
NIF3L1-205ENST00000409588 TNFRSF9Q07011 255 aa10.77□□□□□ -0.69
NIF3L1-205ENST00000409588 TMEM128Q5BJH2 165 aa10.77□□□□□ -0.69
NIF3L1-205ENST00000409588 TCF24Q7RTU0 167 aa10.77□□□□□ -0.69
NIF3L1-205ENST00000409588 TMEM217Q8N7C4 229 aa10.77□□□□□ -0.69
NIF3L1-205ENST00000409588 SLC24A4Q8NFF2 622 aa10.77□□□□□ -0.69
NIF3L1-205ENST00000409588 OR1S2Q8NGQ3 325 aa10.77□□□□□ -0.69
NIF3L1-205ENST00000409588 Q8WTZ3 238 aa10.77□□□□□ -0.69
NIF3L1-205ENST00000409588 RNF183Q96D59 192 aa10.77□□□□□ -0.69
NIF3L1-205ENST00000409588 CSTL1Q9H114 145 aa10.77□□□□□ -0.69
NIF3L1-205ENST00000409588 FNDC4Q9H6D8 234 aaPredicted RBP10.77□□□□□ -0.69
NIF3L1-205ENST00000409588 RYR3Q15413 4870 aa10.77□□□□□ -0.69
NIF3L1-205ENST00000409588 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.76□□□□□ -0.69
NIF3L1-205ENST00000409588 SMCO1Q147U7 214 aa10.76□□□□□ -0.69
NIF3L1-205ENST00000409588 PYDC2Q56P42 97 aa10.76□□□□□ -0.69
NIF3L1-205ENST00000409588 GATAD1Q8WUU5 269 aa10.76□□□□□ -0.69
NIF3L1-205ENST00000409588 HSPB7Q9UBY9 170 aa10.76□□□□□ -0.69
NIF3L1-205ENST00000409588 TENM2Q9NT68 2774 aa10.76□□□□□ -0.69
NIF3L1-205ENST00000409588 CSMD3Q7Z407 3707 aa10.75□□□□□ -0.69
NIF3L1-205ENST00000409588 CCDC160A6NGH7 325 aa10.75□□□□□ -0.69
NIF3L1-205ENST00000409588 MPTX1A8MV57 137 aa10.75□□□□□ -0.69
NIF3L1-205ENST00000409588 JTBO76095 146 aa10.75□□□□□ -0.69
NIF3L1-205ENST00000409588 IGKV1-17P01599 117 aa10.75□□□□□ -0.69
NIF3L1-205ENST00000409588 SLC25A6P12236 298 aa10.75□□□□□ -0.69
NIF3L1-205ENST00000409588 RPL11P62913 178 aaKnown RBP10.75□□□□□ -0.69
NIF3L1-205ENST00000409588 KLF9Q13886 244 aaPredicted RBP10.75□□□□□ -0.69
NIF3L1-205ENST00000409588 MLANAQ16655 118 aa10.75□□□□□ -0.69
NIF3L1-205ENST00000409588 PRSS54Q6PEW0 395 aa10.75□□□□□ -0.69
NIF3L1-205ENST00000409588 ST8SIA2Q92186 375 aa10.75□□□□□ -0.69
NIF3L1-205ENST00000409588 KRTAP9-2Q9BYQ4 174 aa10.75□□□□□ -0.69
NIF3L1-205ENST00000409588 MS4A6AQ9H2W1 248 aa10.75□□□□□ -0.69
NIF3L1-205ENST00000409588 PFDN2Q9UHV9 154 aa10.75□□□□□ -0.69
NIF3L1-205ENST00000409588 IGHV3-49A0A0A0MS15 119 aa10.74□□□□□ -0.69
NIF3L1-205ENST00000409588 HELTA6NFD8 242 aa10.74□□□□□ -0.69
NIF3L1-205ENST00000409588 IFNA10P01566 189 aa10.74□□□□□ -0.69
NIF3L1-205ENST00000409588 NPY1RP25929 384 aa10.74□□□□□ -0.69
NIF3L1-205ENST00000409588 GPX4P36969 197 aaPredicted RBP10.74□□□□□ -0.69
NIF3L1-205ENST00000409588 SUPT4H1P63272 117 aaKnown RBP10.74□□□□□ -0.69
NIF3L1-205ENST00000409588 SPANXN2Q5MJ10 180 aa10.74□□□□□ -0.69
NIF3L1-205ENST00000409588 LRTM2Q8N967 370 aa10.74□□□□□ -0.69
NIF3L1-205ENST00000409588 FAM90A26D6RGX4 464 aa10.73□□□□□ -0.69
NIF3L1-205ENST00000409588 APOHP02749 345 aaPredicted RBP10.73□□□□□ -0.69
NIF3L1-205ENST00000409588 IGLC1P0CG04 106 aa10.73□□□□□ -0.69
NIF3L1-205ENST00000409588 OR10J1P30954 320 aa10.73□□□□□ -0.69
NIF3L1-205ENST00000409588 TFPI2P48307 235 aa10.73□□□□□ -0.69
NIF3L1-205ENST00000409588 TMEM41BQ5BJD5 291 aa10.73□□□□□ -0.69
NIF3L1-205ENST00000409588 LYZL2Q7Z4W2 148 aa10.73□□□□□ -0.69
NIF3L1-205ENST00000409588 CCDC190Q86UF4 302 aa10.73□□□□□ -0.69
NIF3L1-205ENST00000409588 APRG1Q8IVJ8 170 aa10.73□□□□□ -0.69
NIF3L1-205ENST00000409588 GBGT1Q8N5D6 347 aa10.73□□□□□ -0.69
NIF3L1-205ENST00000409588 DTD1Q8TEA8 209 aa10.73□□□□□ -0.69
NIF3L1-205ENST00000409588 TRIM63Q969Q1 353 aa10.73□□□□□ -0.69
NIF3L1-205ENST00000409588 SEPSECSQ9HD40 501 aaKnown RBP10.73□□□□□ -0.69
NIF3L1-205ENST00000409588 TMED3Q9Y3Q3 217 aa10.73□□□□□ -0.69
NIF3L1-205ENST00000409588 U3KQE9 123 aa10.73□□□□□ -0.69
NIF3L1-205ENST00000409588 IGKV3-7A0A075B6H7 116 aa10.72□□□□□ -0.69
NIF3L1-205ENST00000409588 IGHV3OR16-13A0A075B7E8 117 aa10.72□□□□□ -0.69
NIF3L1-205ENST00000409588 IGHV3-74A0A0B4J1X5 117 aa10.72□□□□□ -0.69
NIF3L1-205ENST00000409588 MED6O75586 246 aa10.72□□□□□ -0.69
NIF3L1-205ENST00000409588 FABP1P07148 127 aa10.72□□□□□ -0.69
NIF3L1-205ENST00000409588 RD3LP0DJH9 198 aa10.72□□□□□ -0.69
NIF3L1-205ENST00000409588 RPL35AP18077 110 aaKnown RBP10.72□□□□□ -0.69
NIF3L1-205ENST00000409588 NUP62P37198 522 aaPredicted RBP10.72□□□□□ -0.69
NIF3L1-205ENST00000409588 RND2P52198 227 aa10.72□□□□□ -0.69
NIF3L1-205ENST00000409588 UBE2MP61081 183 aaKnown RBP10.72□□□□□ -0.69
NIF3L1-205ENST00000409588 RPP30P78346 268 aaKnown RBP10.72□□□□□ -0.69
NIF3L1-205ENST00000409588 DEFB135Q30KP9 77 aa10.72□□□□□ -0.69
NIF3L1-205ENST00000409588 TIGITQ495A1 244 aa10.72□□□□□ -0.69
NIF3L1-205ENST00000409588 LYG2Q86SG7 212 aa10.72□□□□□ -0.69
NIF3L1-205ENST00000409588 LILRB2Q8N423 598 aa10.72□□□□□ -0.69
NIF3L1-205ENST00000409588 OR1S1Q8NH92 325 aa10.72□□□□□ -0.69
NIF3L1-205ENST00000409588 MRPL36Q9P0J6 103 aaKnown RBP10.72□□□□□ -0.69
NIF3L1-205ENST00000409588 V9GYH0 126 aa10.72□□□□□ -0.69
NIF3L1-205ENST00000409588 NAP1L6A6NFF2 107 aa10.71□□□□□ -0.69
NIF3L1-205ENST00000409588 HNRNPCP07910 306 aaKnown RBP eCLIP10.71□□□□□ -0.69
NIF3L1-205ENST00000409588 P2RY1P47900 373 aa10.71□□□□□ -0.69
NIF3L1-205ENST00000409588 RAB11AP62491 216 aa10.71□□□□□ -0.69
NIF3L1-205ENST00000409588 NPIPB3Q92617 1050 aa10.71□□□□□ -0.69
NIF3L1-205ENST00000409588 CIB3Q96Q77 187 aaPredicted RBP10.71□□□□□ -0.69
NIF3L1-205ENST00000409588 RABAC1Q9UI14 185 aa10.71□□□□□ -0.69
NIF3L1-205ENST00000409588 KRTAP9-6A0A140TA67 174 aa10.7□□□□□ -0.7
NIF3L1-205ENST00000409588 NUPR2A6NF83 97 aa10.7□□□□□ -0.7
NIF3L1-205ENST00000409588 K7EQG2 157 aa10.7□□□□□ -0.7
NIF3L1-205ENST00000409588 PITX3O75364 302 aa10.7□□□□□ -0.7
NIF3L1-205ENST00000409588 TOMM40O96008 361 aa10.7□□□□□ -0.7
NIF3L1-205ENST00000409588 IFNA4P05014 189 aa10.7□□□□□ -0.7
NIF3L1-205ENST00000409588 RBMS2Q15434 407 aaKnown RBP10.7□□□□□ -0.7
NIF3L1-205ENST00000409588 ZNF79Q15937 498 aa10.7□□□□□ -0.7
NIF3L1-205ENST00000409588 TMED4Q7Z7H5 227 aa10.7□□□□□ -0.7
NIF3L1-205ENST00000409588 STHQ8IWL8 128 aa10.7□□□□□ -0.7
NIF3L1-205ENST00000409588 TMEM170AQ8WVE7 144 aa10.7□□□□□ -0.7
NIF3L1-205ENST00000409588 RARRES2Q99969 163 aa10.7□□□□□ -0.7
NIF3L1-205ENST00000409588 RBM38Q9H0Z9 239 aaKnown RBP10.7□□□□□ -0.7
NIF3L1-205ENST00000409588 RBKSQ9H477 322 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms