RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 SMG1Q96Q15 3661 aaKnown RBP13.49□□□□□ -0.25
NUP50-203ENST00000407019 PIEZO2Q9H5I5 2752 aa13.48□□□□□ -0.25
NUP50-203ENST00000407019 SNURFLB1AK76 121 aa13.48□□□□□ -0.25
NUP50-203ENST00000407019 FCN1O00602 326 aa13.48□□□□□ -0.25
NUP50-203ENST00000407019 GATCO43716 136 aaKnown RBP13.48□□□□□ -0.25
NUP50-203ENST00000407019 RUSC1-AS1Q66K80 236 aa13.48□□□□□ -0.25
NUP50-203ENST00000407019 PPP1R27Q86WC6 154 aa13.48□□□□□ -0.25
NUP50-203ENST00000407019 ADGRG4Q8IZF6 3080 aa13.48□□□□□ -0.25
NUP50-203ENST00000407019 GRIFINA4D1Z8 144 aa13.48□□□□□ -0.25
NUP50-203ENST00000407019 PEX7O00628 323 aa13.48□□□□□ -0.25
NUP50-203ENST00000407019 APELAP0DMC3 54 aa13.48□□□□□ -0.25
NUP50-203ENST00000407019 ORM2P19652 201 aa13.48□□□□□ -0.25
NUP50-203ENST00000407019 UCNP55089 124 aa13.48□□□□□ -0.25
NUP50-203ENST00000407019 CX3CL1P78423 397 aa13.48□□□□□ -0.25
NUP50-203ENST00000407019 C19orf35Q6ZS72 473 aa13.48□□□□□ -0.25
NUP50-203ENST00000407019 TMEM116Q8NCL8 245 aa13.48□□□□□ -0.25
NUP50-203ENST00000407019 STXBP6Q8NFX7 210 aa13.48□□□□□ -0.25
NUP50-203ENST00000407019 OR1B1Q8NGR6 318 aa13.48□□□□□ -0.25
NUP50-203ENST00000407019 GNB1LQ9BYB4 327 aa13.48□□□□□ -0.25
NUP50-203ENST00000407019 ZNF705GA8MUZ8 300 aaPredicted RBP13.47□□□□□ -0.25
NUP50-203ENST00000407019 CRISP2P16562 243 aa13.47□□□□□ -0.25
NUP50-203ENST00000407019 DDTP30046 118 aa13.47□□□□□ -0.25
NUP50-203ENST00000407019 PAX2Q02962 417 aa13.47□□□□□ -0.25
NUP50-203ENST00000407019 ST6GALNAC3Q8NDV1 305 aa13.47□□□□□ -0.25
NUP50-203ENST00000407019 CMTM2Q8TAZ6 248 aa13.47□□□□□ -0.25
NUP50-203ENST00000407019 F11RQ9Y624 299 aaKnown RBP13.47□□□□□ -0.25
NUP50-203ENST00000407019 TEX22C9J3V5 150 aa13.46□□□□□ -0.25
NUP50-203ENST00000407019 NUPR1O60356 82 aa13.46□□□□□ -0.25
NUP50-203ENST00000407019 WDR73Q6P4I2 378 aa13.46□□□□□ -0.25
NUP50-203ENST00000407019 LINC00479Q96M42 142 aa13.46□□□□□ -0.25
NUP50-203ENST00000407019 FBXL15Q9H469 300 aa13.46□□□□□ -0.25
NUP50-203ENST00000407019 SERTAD4Q9NUC0 356 aa13.46□□□□□ -0.25
NUP50-203ENST00000407019 ONECUT1Q9UBC0 465 aa13.46□□□□□ -0.25
NUP50-203ENST00000407019 MT-ND6P03923 174 aa13.46□□□□□ -0.26
NUP50-203ENST00000407019 FRMD6-AS1P0C7T7 363 aa13.46□□□□□ -0.26
NUP50-203ENST00000407019 KLRB1Q12918 225 aa13.46□□□□□ -0.26
NUP50-203ENST00000407019 IQCJQ1A5X6 159 aa13.46□□□□□ -0.26
NUP50-203ENST00000407019 COX19Q49B96 90 aa13.46□□□□□ -0.26
NUP50-203ENST00000407019 NHLRC2Q8NBF2 726 aa13.46□□□□□ -0.26
NUP50-203ENST00000407019 IGHV3-21A0A0B4J1V1 117 aa13.45□□□□□ -0.26
NUP50-203ENST00000407019 SMIM27A0A1W2PRY6 76 aa13.45□□□□□ -0.26
NUP50-203ENST00000407019 LY6LH3BQJ8 138 aa13.45□□□□□ -0.26
NUP50-203ENST00000407019 LIPFP07098 398 aa13.45□□□□□ -0.26
NUP50-203ENST00000407019 TCL1AP56279 114 aa13.45□□□□□ -0.26
NUP50-203ENST00000407019 RNF5Q99942 180 aa13.45□□□□□ -0.26
NUP50-203ENST00000407019 TP53TG3Q9ULZ0 132 aa13.45□□□□□ -0.26
NUP50-203ENST00000407019 NAV3Q8IVL0 2385 aa13.45□□□□□ -0.26
NUP50-203ENST00000407019 SPINK4O60575 86 aa13.44□□□□□ -0.26
NUP50-203ENST00000407019 HYPMO75409 117 aa13.44□□□□□ -0.26
NUP50-203ENST00000407019 MYCNOSP40205 109 aa13.44□□□□□ -0.26
NUP50-203ENST00000407019 BAGE2Q86Y30 109 aa13.44□□□□□ -0.26
NUP50-203ENST00000407019 LY6G5BQ8NDX9 201 aa13.44□□□□□ -0.26
NUP50-203ENST00000407019 SRSF12Q8WXF0 261 aaKnown RBP13.44□□□□□ -0.26
NUP50-203ENST00000407019 RAB1BQ9H0U4 201 aa13.44□□□□□ -0.26
NUP50-203ENST00000407019 RAXQ9Y2V3 346 aa13.44□□□□□ -0.26
NUP50-203ENST00000407019 SPTBN2O15020 2390 aa13.44□□□□□ -0.26
NUP50-203ENST00000407019 PTPRZ1P23471 2315 aaPredicted RBP13.44□□□□□ -0.26
NUP50-203ENST00000407019 PAX1P15863 534 aa13.44□□□□□ -0.26
NUP50-203ENST00000407019 RANP62826 216 aaKnown RBP13.44□□□□□ -0.26
NUP50-203ENST00000407019 ADORA2A-AS1P86434 159 aa13.44□□□□□ -0.26
NUP50-203ENST00000407019 PLGLAQ15195 96 aa13.44□□□□□ -0.26
NUP50-203ENST00000407019 ZNF664Q8N3J9 261 aa13.44□□□□□ -0.26
NUP50-203ENST00000407019 C14orf144Q96I85 54 aa13.44□□□□□ -0.26
NUP50-203ENST00000407019 NAT8BQ9UHF3 227 aa13.44□□□□□ -0.26
NUP50-203ENST00000407019 TRAV34A0A0B4J273 112 aa13.43□□□□□ -0.26
NUP50-203ENST00000407019 ESDP10768 282 aa13.43□□□□□ -0.26
NUP50-203ENST00000407019 TPPP2P59282 170 aa13.43□□□□□ -0.26
NUP50-203ENST00000407019 PLP1P60201 277 aa13.43□□□□□ -0.26
NUP50-203ENST00000407019 TMEM136Q6ZRR5 245 aa13.43□□□□□ -0.26
NUP50-203ENST00000407019 FAM231DQ6ZW35 169 aa13.43□□□□□ -0.26
NUP50-203ENST00000407019 LURAP1LQ8IV03 231 aa13.43□□□□□ -0.26
NUP50-203ENST00000407019 BLNKQ8WV28 456 aa13.43□□□□□ -0.26
NUP50-203ENST00000407019 NOL4LQ96MY1 436 aaPredicted RBP13.43□□□□□ -0.26
NUP50-203ENST00000407019 MS4A10Q96PG2 267 aa13.43□□□□□ -0.26
NUP50-203ENST00000407019 KALRNO60229 2985 aa13.43□□□□□ -0.26
NUP50-203ENST00000407019 AMY1AP04745 511 aa13.43□□□□□ -0.26
NUP50-203ENST00000407019 SLC25A5P05141 298 aaKnown RBP13.43□□□□□ -0.26
NUP50-203ENST00000407019 SNRPCP09234 159 aaKnown RBP13.43□□□□□ -0.26
NUP50-203ENST00000407019 LINC00310P59036 64 aa13.43□□□□□ -0.26
NUP50-203ENST00000407019 GNG5P63218 68 aa13.43□□□□□ -0.26
NUP50-203ENST00000407019 Q0VG73 95 aa13.43□□□□□ -0.26
NUP50-203ENST00000407019 CDSNQ15517 529 aa13.43□□□□□ -0.26
NUP50-203ENST00000407019 TPTE2P1Q5T6R2 138 aa13.43□□□□□ -0.26
NUP50-203ENST00000407019 TIMD4Q96H15 378 aa13.43□□□□□ -0.26
NUP50-203ENST00000407019 PTPRQQ9UMZ3 2332 aa13.42□□□□□ -0.26
NUP50-203ENST00000407019 POLEQ07864 2286 aa13.42□□□□□ -0.26
NUP50-203ENST00000407019 IZUMO1RA6ND01 250 aa13.42□□□□□ -0.26
NUP50-203ENST00000407019 SERF1AO75920 110 aa13.42□□□□□ -0.26
NUP50-203ENST00000407019 LY6HO94772 140 aa13.42□□□□□ -0.26
NUP50-203ENST00000407019 RAB4BP61018 213 aa13.42□□□□□ -0.26
NUP50-203ENST00000407019 UBE2G1P62253 170 aa13.42□□□□□ -0.26
NUP50-203ENST00000407019 PAFAH1B2P68402 229 aa13.42□□□□□ -0.26
NUP50-203ENST00000407019 SLC35B1P78383 322 aa13.42□□□□□ -0.26
NUP50-203ENST00000407019 TMEM183BQ1AE95 376 aa13.42□□□□□ -0.26
NUP50-203ENST00000407019 REC114Q7Z4M0 266 aa13.42□□□□□ -0.26
NUP50-203ENST00000407019 BAGE3Q86Y29 109 aa13.42□□□□□ -0.26
NUP50-203ENST00000407019 EPDR1Q9UM22 224 aa13.42□□□□□ -0.26
NUP50-203ENST00000407019 TIMM23O14925 209 aa13.41□□□□□ -0.26
NUP50-203ENST00000407019 SCGB1D1O95968 90 aa13.41□□□□□ -0.26
NUP50-203ENST00000407019 NBEAP1P0C6P0 100 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms