RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ZNF439Q8NDP4 499 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 OR1L1Q8NH94 360 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 MRGPRFQ96AM1 343 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 RNF2Q99496 336 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 AGMATQ9BSE5 352 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 ZNF2Q9BSG1 426 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 REG4Q9BYZ8 158 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 FXYD6Q9H0Q3 95 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 C20orf85Q9H1P6 137 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 METTL8Q9H825 291 aaKnown RBP3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 OR2S2Q9NQN1 319 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 INSIG2Q9Y5U4 225 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 TEX15Q9BXT5 2789 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 IGKV1D-13A0A0B4J2D9 117 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 PIGBOS1A0A0B4J2F0 54 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 A0A0G2JLM5 398 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 C7orf66A4D0T2 115 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 SNRPGP15A8MWD9 76 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 INMT-MINDY4F8WBC2 141 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 J3QLI3 93 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 GPR31O00270 319 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 MSMBP08118 114 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 OR8U9P0C7N5 309 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 IGKV1-13P0DP09 117 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 NFYAP23511 347 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 OMGP23515 440 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 S100GP29377 79 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 GNRHRP30968 328 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 PPP1CCP36873 323 aaKnown RBP3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 CTRLP40313 264 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 SELENOTP62341 195 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 TMEM128Q5BJH2 165 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 CMTM1Q8IZ96 169 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 ZNF645Q8N7E2 425 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 TCTEX1D1Q8N7M0 179 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 OR11H6Q8NGC7 330 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 OR13D1Q8NGV5 346 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 OR8U1Q8NH10 309 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 OR9G1Q8NH87 305 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 MARCH1Q8TCQ1 289 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 GALNT14Q96FL9 552 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 RTBDNQ9BSG5 229 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 TMEM133Q9H2Q1 129 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 RBKSQ9H477 322 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 PSG11Q9UQ72 335 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 C14orf166Q9Y224 244 aaKnown RBP3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 KCNIP3Q9Y2W7 256 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 CSMD1Q96PZ7 3565 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 ZANQ9Y493 2812 aa3.29□□□□□ -1.88
HMGB3P19-201ENST00000403971 TRAV6A0A075B6T7 132 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 IGHV2-26A0A0B4J1V2 119 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 IGHV3-43A0A0B4J1X8 118 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 A0A0B4J2A0 478 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 CRYM-AS1A6NIL9 109 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 ODF3BA8MYP8 253 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 OOSP1A8MZH6 123 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 TOR1AO14656 332 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 RAB29O14966 203 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 RBFOX2O43251 390 aaKnown RBP eCLIP3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 IGHV3-43DP0DP04 118 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 SPNP16150 400 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 NFYBP25208 207 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 IL3RAP26951 378 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 RPL13AP40429 203 aaKnown RBP3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 UBE2E1P51965 193 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 PRRX1P54821 245 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 PIGPP57054 158 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 FXYD4P59646 89 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 ARF6P62330 175 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 LCN2P80188 198 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 CATR1Q13166 79 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 DHRS2Q13268 280 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 EIF4EBP1Q13541 118 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 GNMTQ14749 295 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 TMEM249Q2WGJ8 235 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 HLA-DRB5Q30154 266 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 ABCA11PQ4W5N1 156 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 CT45A1Q5HYN5 189 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 MINOS1Q5TGZ0 78 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 PRAMEF5Q5TYX0 476 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 ZNF818PQ6ZRF7 136 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 ZNF833PQ6ZTB9 187 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 LYG2Q86SG7 212 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 SGPP2Q8IWX5 399 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 DRAM1Q8N682 238 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 TEX29Q8N6K0 151 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 NKAPP1Q8N9T2 125 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 CT45A3Q8NHU0 189 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 UBALD1Q8TB05 177 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 CD300LFQ8TDQ1 290 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 RTN4IP1Q8WWV3 396 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 TMEM230Q96A57 120 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 ZNF414Q96IQ9 312 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 ABHD14BQ96IU4 210 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 SEC22AQ96IW7 307 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 ADTRPQ96IZ2 230 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 HSD17B10Q99714 261 aaKnown RBP3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 ZNF251Q9BRH9 671 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 SUCNR1Q9BXA5 334 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 PARP12Q9H0J9 701 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms