RNA–Protein interactions for RNA: ENST00000399408.6

ABCC1-201, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 5 BASIC

Gene ABCC1, Length 6,594 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-201ENST00000399408 TRAV8-6A0A0B4J262 113 aa12.6□□□□□ -0.39
ABCC1-201ENST00000399408 TMEM170BQ5T4T1 132 aa12.6□□□□□ -0.39
ABCC1-201ENST00000399408 FAM19A2Q8N3H0 131 aa12.6□□□□□ -0.39
ABCC1-201ENST00000399408 ZNF581Q9P0T4 197 aa12.6□□□□□ -0.39
ABCC1-201ENST00000399408 CTAG1AP78358 180 aa12.6□□□□□ -0.39
ABCC1-201ENST00000399408 GAFA1Q96PS6 74 aa12.6□□□□□ -0.39
ABCC1-201ENST00000399408 IGKV3OR2-268A0A0C4DH90 116 aa12.6□□□□□ -0.39
ABCC1-201ENST00000399408 ADMP35318 185 aa12.6□□□□□ -0.39
ABCC1-201ENST00000399408 C5orf24Q7Z6I8 188 aa12.6□□□□□ -0.39
ABCC1-201ENST00000399408 TMEM167AQ8TBQ9 72 aa12.6□□□□□ -0.39
ABCC1-201ENST00000399408 GBF1Q92538 1859 aa12.6□□□□□ -0.39
ABCC1-201ENST00000399408 IGHV1-3A0A0C4DH29 117 aa12.6□□□□□ -0.39
ABCC1-201ENST00000399408 FAM71F2Q6NXP2 309 aa12.6□□□□□ -0.39
ABCC1-201ENST00000399408 RNF5Q99942 180 aa12.6□□□□□ -0.39
ABCC1-201ENST00000399408 VDAC2P45880 294 aaPredicted RBP12.59□□□□□ -0.39
ABCC1-201ENST00000399408 ARL6IP6Q8N6S5 226 aa12.59□□□□□ -0.39
ABCC1-201ENST00000399408 TRAV40A0A0B4J280 105 aa12.59□□□□□ -0.39
ABCC1-201ENST00000399408 PLP1P60201 277 aa12.59□□□□□ -0.39
ABCC1-201ENST00000399408 SLC25A48Q6ZT89 311 aaKnown RBP12.59□□□□□ -0.39
ABCC1-201ENST00000399408 FAM169BQ8N8A8 192 aa12.59□□□□□ -0.39
ABCC1-201ENST00000399408 FOXC2Q99958 501 aa12.59□□□□□ -0.39
ABCC1-201ENST00000399408 MDC1Q14676 2089 aaKnown RBP12.59□□□□□ -0.39
ABCC1-201ENST00000399408 TRAV5A0A0B4J249 113 aa12.59□□□□□ -0.39
ABCC1-201ENST00000399408 A0A1B0GW64 132 aa12.59□□□□□ -0.39
ABCC1-201ENST00000399408 WNT2P09544 360 aa12.59□□□□□ -0.39
ABCC1-201ENST00000399408 ZNF418Q8TF45 676 aaPredicted RBP12.59□□□□□ -0.39
ABCC1-201ENST00000399408 SSBP4Q9BWG4 385 aaPredicted RBP12.59□□□□□ -0.39
ABCC1-201ENST00000399408 LOC105371267A0A1B0GV96 52 aa12.59□□□□□ -0.39
ABCC1-201ENST00000399408 C19orf67A6NJJ6 358 aa12.59□□□□□ -0.39
ABCC1-201ENST00000399408 SUMO2P61956 95 aaKnown RBP12.59□□□□□ -0.39
ABCC1-201ENST00000399408 SRSF4Q08170 494 aaKnown RBP12.59□□□□□ -0.39
ABCC1-201ENST00000399408 YAE1D1Q9NRH1 226 aa12.59□□□□□ -0.39
ABCC1-201ENST00000399408 IGKV1D-17A0A075B6S4 117 aa12.59□□□□□ -0.39
ABCC1-201ENST00000399408 CFPP27918 469 aa12.59□□□□□ -0.39
ABCC1-201ENST00000399408 TPTE2P1Q5T6R2 138 aa12.59□□□□□ -0.39
ABCC1-201ENST00000399408 TRAV3A0A0B4J244 114 aa12.58□□□□□ -0.4
ABCC1-201ENST00000399408 PRDM13Q9H4Q3 707 aa12.58□□□□□ -0.4
ABCC1-201ENST00000399408 MBNL3Q9NUK0 354 aaKnown RBP12.58□□□□□ -0.4
ABCC1-201ENST00000399408 LINC00473A8K010 186 aa12.58□□□□□ -0.4
ABCC1-201ENST00000399408 OOSP1A8MZH6 123 aa12.58□□□□□ -0.4
ABCC1-201ENST00000399408 ZNF474Q6S9Z5 364 aaPredicted RBP12.58□□□□□ -0.4
ABCC1-201ENST00000399408 VMO1Q7Z5L0 202 aa12.58□□□□□ -0.4
ABCC1-201ENST00000399408 C14orf144Q96I85 54 aa12.58□□□□□ -0.4
ABCC1-201ENST00000399408 TMEM242Q9NWH2 141 aa12.58□□□□□ -0.4
ABCC1-201ENST00000399408 PSMB11A5LHX3 300 aa12.58□□□□□ -0.4
ABCC1-201ENST00000399408 LINC01587Q99440 93 aa12.58□□□□□ -0.4
ABCC1-201ENST00000399408 NRN1Q9NPD7 142 aa12.58□□□□□ -0.4
ABCC1-201ENST00000399408 MED12Q93074 2177 aa12.58□□□□□ -0.4
ABCC1-201ENST00000399408 TCF20Q9UGU0 1960 aaKnown RBP12.58□□□□□ -0.4
ABCC1-201ENST00000399408 PSMG4Q5JS54 123 aa12.58□□□□□ -0.4
ABCC1-201ENST00000399408 PARD6GQ9BYG4 376 aaPredicted RBP12.58□□□□□ -0.4
ABCC1-201ENST00000399408 RPP25LQ8N5L8 163 aaKnown RBP12.57□□□□□ -0.4
ABCC1-201ENST00000399408 H0YJW9 148 aa12.57□□□□□ -0.4
ABCC1-201ENST00000399408 LEPP41159 167 aa12.57□□□□□ -0.4
ABCC1-201ENST00000399408 SPATA31B1PQ5VZV4 182 aa12.57□□□□□ -0.4
ABCC1-201ENST00000399408 TRAV41A0A0B4J266 112 aa12.57□□□□□ -0.4
ABCC1-201ENST00000399408 HIST1H2BKO60814 126 aa12.57□□□□□ -0.4
ABCC1-201ENST00000399408 HIST1H2BJP06899 126 aa12.57□□□□□ -0.4
ABCC1-201ENST00000399408 HIST1H2BOP23527 126 aa12.57□□□□□ -0.4
ABCC1-201ENST00000399408 HIST1H2BBP33778 126 aa12.57□□□□□ -0.4
ABCC1-201ENST00000399408 HIST1H2BDP58876 126 aa12.57□□□□□ -0.4
ABCC1-201ENST00000399408 HIST1H2BCP62807 126 aa12.57□□□□□ -0.4
ABCC1-201ENST00000399408 HIST2H2BEQ16778 126 aa12.57□□□□□ -0.4
ABCC1-201ENST00000399408 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.57□□□□□ -0.4
ABCC1-201ENST00000399408 HIST1H2BHQ93079 126 aa12.57□□□□□ -0.4
ABCC1-201ENST00000399408 TMEM101Q96IK0 257 aa12.57□□□□□ -0.4
ABCC1-201ENST00000399408 HIST1H2BNQ99877 126 aa12.57□□□□□ -0.4
ABCC1-201ENST00000399408 HIST1H2BMQ99879 126 aa12.57□□□□□ -0.4
ABCC1-201ENST00000399408 GSN-AS1Q9NRJ2 163 aa12.57□□□□□ -0.4
ABCC1-201ENST00000399408 MINOS1Q5TGZ0 78 aa12.57□□□□□ -0.4
ABCC1-201ENST00000399408 C1QL4Q86Z23 238 aa12.57□□□□□ -0.4
ABCC1-201ENST00000399408 TTC9CQ8N5M4 171 aa12.57□□□□□ -0.4
ABCC1-201ENST00000399408 MGST2Q99735 147 aa12.57□□□□□ -0.4
ABCC1-201ENST00000399408 MINOS1-NBL1R4GNA1 71 aa12.57□□□□□ -0.4
ABCC1-201ENST00000399408 SMIM13P0DJ93 91 aa12.57□□□□□ -0.4
ABCC1-201ENST00000399408 PAX8Q06710 450 aa12.57□□□□□ -0.4
ABCC1-201ENST00000399408 TSKUQ8WUA8 353 aa12.57□□□□□ -0.4
ABCC1-201ENST00000399408 SNRNP200O75643 2136 aaKnown RBP12.56□□□□□ -0.4
ABCC1-201ENST00000399408 LY6G6EA0A0G2JKS1 128 aa12.56□□□□□ -0.4
ABCC1-201ENST00000399408 TMEM190Q8WZ59 177 aa12.56□□□□□ -0.4
ABCC1-201ENST00000399408 GNB1LQ9BYB4 327 aa12.56□□□□□ -0.4
ABCC1-201ENST00000399408 U3KQA8 63 aa12.56□□□□□ -0.4
ABCC1-201ENST00000399408 TRAV21A0A0B4J279 112 aa12.56□□□□□ -0.4
ABCC1-201ENST00000399408 A0A1W2PRX2 142 aa12.56□□□□□ -0.4
ABCC1-201ENST00000399408 TMEM50AO95807 157 aa12.56□□□□□ -0.4
ABCC1-201ENST00000399408 DSCR9P59020 149 aa12.56□□□□□ -0.4
ABCC1-201ENST00000399408 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.56□□□□□ -0.4
ABCC1-201ENST00000399408 CACNA1DQ01668 2161 aa12.56□□□□□ -0.4
ABCC1-201ENST00000399408 A0A1B0GWJ7 208 aa12.56□□□□□ -0.4
ABCC1-201ENST00000399408 TMEM262E9PQX1 116 aa12.56□□□□□ -0.4
ABCC1-201ENST00000399408 GLMPQ8WWB7 406 aa12.56□□□□□ -0.4
ABCC1-201ENST00000399408 TRBV24-1A0A075B6N3 115 aa12.55□□□□□ -0.4
ABCC1-201ENST00000399408 DUSP14O95147 198 aaKnown RBP12.55□□□□□ -0.4
ABCC1-201ENST00000399408 LDLRAD2Q5SZI1 272 aa12.55□□□□□ -0.4
ABCC1-201ENST00000399408 CD7P09564 240 aa12.55□□□□□ -0.4
ABCC1-201ENST00000399408 PSG1P11464 419 aa12.55□□□□□ -0.4
ABCC1-201ENST00000399408 KLRD1Q13241 179 aa12.55□□□□□ -0.4
ABCC1-201ENST00000399408 SEPSECSQ9HD40 501 aaKnown RBP12.55□□□□□ -0.4
ABCC1-201ENST00000399408 A0A1B0GV90 55 aa12.55□□□□□ -0.4
ABCC1-201ENST00000399408 ALKBH7Q9BT30 221 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms