RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 FAM181BA6NEQ2 426 aa11.17□□□□□ -0.62
COL6A2-203ENST00000397763 SLC25A33Q9BSK2 321 aa11.17□□□□□ -0.62
COL6A2-203ENST00000397763 MRPL20Q9BYC9 149 aaKnown RBP11.17□□□□□ -0.62
COL6A2-203ENST00000397763 TMEM167BQ9NRX6 74 aa11.17□□□□□ -0.62
COL6A2-203ENST00000397763 PROCRQ9UNN8 238 aa11.17□□□□□ -0.62
COL6A2-203ENST00000397763 MOSP00540 346 aa11.16□□□□□ -0.62
COL6A2-203ENST00000397763 PSG1P11464 419 aa11.16□□□□□ -0.62
COL6A2-203ENST00000397763 ORM2P19652 201 aa11.16□□□□□ -0.62
COL6A2-203ENST00000397763 Q71RC1 249 aaPredicted RBP11.16□□□□□ -0.62
COL6A2-203ENST00000397763 TCF24Q7RTU0 167 aa11.16□□□□□ -0.62
COL6A2-203ENST00000397763 ASH1LQ9NR48 2969 aaKnown RBP11.16□□□□□ -0.62
COL6A2-203ENST00000397763 SNAI2O43623 268 aa11.16□□□□□ -0.62
COL6A2-203ENST00000397763 NUDT3O95989 172 aa11.16□□□□□ -0.62
COL6A2-203ENST00000397763 ZNF137PP52743 207 aa11.16□□□□□ -0.62
COL6A2-203ENST00000397763 TCTAP57738 103 aa11.16□□□□□ -0.62
COL6A2-203ENST00000397763 UBE2G1P62253 170 aa11.16□□□□□ -0.62
COL6A2-203ENST00000397763 ZNF841Q6ZN19 808 aa11.16□□□□□ -0.62
COL6A2-203ENST00000397763 SPATA12Q7Z6I5 190 aa11.16□□□□□ -0.62
COL6A2-203ENST00000397763 AMMECR1Q9Y4X0 333 aaPredicted RBP11.16□□□□□ -0.62
COL6A2-203ENST00000397763 CACNA1BQ00975 2339 aa11.16□□□□□ -0.62
COL6A2-203ENST00000397763 TRAV9-2A0A087WT02 112 aa11.15□□□□□ -0.62
COL6A2-203ENST00000397763 UPK2O00526 184 aa11.15□□□□□ -0.62
COL6A2-203ENST00000397763 C8orf88P0DMB2 117 aa11.15□□□□□ -0.62
COL6A2-203ENST00000397763 C16orf54Q6UWD8 224 aa11.15□□□□□ -0.62
COL6A2-203ENST00000397763 SPACA3Q8IXA5 215 aa11.15□□□□□ -0.62
COL6A2-203ENST00000397763 HARBI1Q96MB7 349 aa11.15□□□□□ -0.62
COL6A2-203ENST00000397763 SLC25A2Q9BXI2 301 aa11.15□□□□□ -0.62
COL6A2-203ENST00000397763 GSX1Q9H4S2 264 aaPredicted RBP11.15□□□□□ -0.62
COL6A2-203ENST00000397763 DKK4Q9UBT3 224 aa11.15□□□□□ -0.62
COL6A2-203ENST00000397763 DSCAML1Q8TD84 2053 aa11.15□□□□□ -0.62
COL6A2-203ENST00000397763 APC2O95996 2303 aa11.15□□□□□ -0.62
COL6A2-203ENST00000397763 OR2T8A6NH00 312 aa11.15□□□□□ -0.62
COL6A2-203ENST00000397763 RNASE2P10153 161 aaKnown RBP11.15□□□□□ -0.62
COL6A2-203ENST00000397763 MBNL2Q5VZF2 373 aaKnown RBP11.15□□□□□ -0.62
COL6A2-203ENST00000397763 HCP5Q6MZN7 132 aa11.15□□□□□ -0.62
COL6A2-203ENST00000397763 GUCD1Q96NT3 240 aa11.15□□□□□ -0.62
COL6A2-203ENST00000397763 COMMD5Q9GZQ3 224 aa11.15□□□□□ -0.62
COL6A2-203ENST00000397763 FNDC4Q9H6D8 234 aaPredicted RBP11.15□□□□□ -0.62
COL6A2-203ENST00000397763 FAM90A9PA6NNJ1 464 aa11.15□□□□□ -0.63
COL6A2-203ENST00000397763 VWC2LB2RUY7 222 aa11.15□□□□□ -0.63
COL6A2-203ENST00000397763 CGB3P0DN86 165 aa11.15□□□□□ -0.63
COL6A2-203ENST00000397763 CGB7P0DN87 165 aa11.15□□□□□ -0.63
COL6A2-203ENST00000397763 PPOXP50336 477 aa11.15□□□□□ -0.63
COL6A2-203ENST00000397763 PRCDQ00LT1 54 aa11.15□□□□□ -0.63
COL6A2-203ENST00000397763 LINC00173Q6ZV60 143 aa11.15□□□□□ -0.63
COL6A2-203ENST00000397763 SEM1Q6ZVN7 128 aa11.15□□□□□ -0.63
COL6A2-203ENST00000397763 NUP35Q8NFH5 326 aa11.15□□□□□ -0.63
COL6A2-203ENST00000397763 NUDT10Q8NFP7 164 aa11.15□□□□□ -0.63
COL6A2-203ENST00000397763 NUDT11Q96G61 164 aa11.15□□□□□ -0.63
COL6A2-203ENST00000397763 OSTCQ9NRP0 149 aa11.15□□□□□ -0.63
COL6A2-203ENST00000397763 ZFHX2Q9C0A1 2572 aaPredicted RBP11.14□□□□□ -0.63
COL6A2-203ENST00000397763 ABCA4P78363 2273 aa11.14□□□□□ -0.63
COL6A2-203ENST00000397763 IGHV2-26A0A0B4J1V2 119 aa11.14□□□□□ -0.63
COL6A2-203ENST00000397763 COX7A2P2O60397 106 aa11.14□□□□□ -0.63
COL6A2-203ENST00000397763 IGLV1-44P01699 117 aa11.14□□□□□ -0.63
COL6A2-203ENST00000397763 ZNF138P52744 262 aa11.14□□□□□ -0.63
COL6A2-203ENST00000397763 IGF2BP2-AS1Q96M15 143 aa11.14□□□□□ -0.63
COL6A2-203ENST00000397763 TPSG1Q9NRR2 321 aa11.14□□□□□ -0.63
COL6A2-203ENST00000397763 SLC25A15Q9Y619 301 aa11.14□□□□□ -0.63
COL6A2-203ENST00000397763 ZGRF1Q86YA3 2104 aa11.14□□□□□ -0.63
COL6A2-203ENST00000397763 HIGD1CA8MV81 97 aa11.14□□□□□ -0.63
COL6A2-203ENST00000397763 SELENOVP59797 346 aa11.14□□□□□ -0.63
COL6A2-203ENST00000397763 TNFAIP6P98066 277 aaPredicted RBP11.14□□□□□ -0.63
COL6A2-203ENST00000397763 GUSBP1Q15486 140 aa11.14□□□□□ -0.63
COL6A2-203ENST00000397763 DEFB109BQ30KR1 87 aa11.14□□□□□ -0.63
COL6A2-203ENST00000397763 ZNF474Q6S9Z5 364 aaPredicted RBP11.14□□□□□ -0.63
COL6A2-203ENST00000397763 FAM167A-AS1Q96KT0 104 aa11.14□□□□□ -0.63
COL6A2-203ENST00000397763 PRNDQ9UKY0 176 aa11.14□□□□□ -0.63
COL6A2-203ENST00000397763 RAI1Q7Z5J4 1906 aaPredicted RBP11.14□□□□□ -0.63
COL6A2-203ENST00000397763 OR4C46A6NHA9 309 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 CDKN1BP46527 198 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 FAM27E3Q08E93 113 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 PATE2Q6UY27 113 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 H1FXQ92522 213 aaKnown RBP11.13□□□□□ -0.63
COL6A2-203ENST00000397763 RITA1Q96K30 269 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 PTPRZ1P23471 2315 aaPredicted RBP11.13□□□□□ -0.63
COL6A2-203ENST00000397763 IGLC7A0M8Q6 106 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 PRR33A8MZF0 331 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 ITGB1BP1O14713 200 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 KIR2DS2P43631 304 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 TAS2R45P59539 299 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 OR5B3Q8NH48 314 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 PAXXQ9BUH6 204 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 MRPS16Q9Y3D3 137 aaKnown RBP11.13□□□□□ -0.63
COL6A2-203ENST00000397763 IGHV2-70DA0A0C4DH43 119 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 MUC21A0A0G2JKD1 596 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 IGHV1-69-2A0A0G2JMI3 117 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 MUC21A0A140T8X8 626 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 SMIM27A0A1W2PRY6 76 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 WT1-ASQ06250 92 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 CD69Q07108 199 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 RTL8BQ17RB0 113 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 MUC21Q5SSG8 566 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 AMMECR1LQ6DCA0 310 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 OR4F17Q8NGA8 305 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 GAFA1Q96PS6 74 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 CHODLQ9H9P2 273 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 TNFRSF19Q9NS68 423 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 DCHS2Q6V1P9 2916 aa11.13□□□□□ -0.63
COL6A2-203ENST00000397763 IZUMO1RA6ND01 250 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms