RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 DEFB131AP59861 70 aa11.82□□□□□ -0.52
CXCL12-206ENST00000395795 PMS2P11Q13670 270 aa11.82□□□□□ -0.52
CXCL12-206ENST00000395795 LEMD1Q68G75 181 aa11.82□□□□□ -0.52
CXCL12-206ENST00000395795 CEMP1Q6PRD7 247 aaPredicted RBP11.82□□□□□ -0.52
CXCL12-206ENST00000395795 SLC24A4Q8NFF2 622 aa11.82□□□□□ -0.52
CXCL12-206ENST00000395795 RNASE11Q8TAA1 199 aaKnown RBP11.82□□□□□ -0.52
CXCL12-206ENST00000395795 ENY2Q9NPA8 101 aa11.82□□□□□ -0.52
CXCL12-206ENST00000395795 V9GYH0 126 aa11.82□□□□□ -0.52
CXCL12-206ENST00000395795 MPTX1A8MV57 137 aa11.81□□□□□ -0.52
CXCL12-206ENST00000395795 P2RY1P47900 373 aa11.81□□□□□ -0.52
CXCL12-206ENST00000395795 RND2P52198 227 aa11.81□□□□□ -0.52
CXCL12-206ENST00000395795 LYZL2Q7Z4W2 148 aa11.81□□□□□ -0.52
CXCL12-206ENST00000395795 RNASEH2CQ8TDP1 164 aaKnown RBP11.81□□□□□ -0.52
CXCL12-206ENST00000395795 GLMPQ8WWB7 406 aa11.81□□□□□ -0.52
CXCL12-206ENST00000395795 HEYLQ9NQ87 328 aaPredicted RBP11.81□□□□□ -0.52
CXCL12-206ENST00000395795 HSPB7Q9UBY9 170 aa11.81□□□□□ -0.52
CXCL12-206ENST00000395795 KMT2AQ03164 3969 aa11.81□□□□□ -0.52
CXCL12-206ENST00000395795 A0A0B4J2A0 478 aa11.8□□□□□ -0.52
CXCL12-206ENST00000395795 FABP12A6NFH5 140 aa11.8□□□□□ -0.52
CXCL12-206ENST00000395795 YPEL3P61236 119 aaPredicted RBP11.8□□□□□ -0.52
CXCL12-206ENST00000395795 USF2Q15853 346 aaPredicted RBP11.8□□□□□ -0.52
CXCL12-206ENST00000395795 ZNF79Q15937 498 aa11.8□□□□□ -0.52
CXCL12-206ENST00000395795 OR1S2Q8NGQ3 325 aa11.8□□□□□ -0.52
CXCL12-206ENST00000395795 GATAD1Q8WUU5 269 aa11.8□□□□□ -0.52
CXCL12-206ENST00000395795 METTL26Q96S19 204 aa11.8□□□□□ -0.52
CXCL12-206ENST00000395795 PTTG2Q9NZH5 202 aa11.8□□□□□ -0.52
CXCL12-206ENST00000395795 SHPKQ9UHJ6 478 aa11.8□□□□□ -0.52
CXCL12-206ENST00000395795 TRAV30A0A087WSZ9 112 aa11.79□□□□□ -0.52
CXCL12-206ENST00000395795 CXorf65A6NEN9 183 aa11.79□□□□□ -0.52
CXCL12-206ENST00000395795 CEBPZOSA8MTT3 80 aa11.79□□□□□ -0.52
CXCL12-206ENST00000395795 PITX3O75364 302 aa11.79□□□□□ -0.52
CXCL12-206ENST00000395795 SULT1A3P0DMM9 295 aa11.79□□□□□ -0.52
CXCL12-206ENST00000395795 SULT1A4P0DMN0 295 aa11.79□□□□□ -0.52
CXCL12-206ENST00000395795 SLC25A4P12235 298 aa11.79□□□□□ -0.52
CXCL12-206ENST00000395795 NPY1RP25929 384 aa11.79□□□□□ -0.52
CXCL12-206ENST00000395795 PAFAH1B2P68402 229 aa11.79□□□□□ -0.52
CXCL12-206ENST00000395795 C16orf54Q6UWD8 224 aa11.79□□□□□ -0.52
CXCL12-206ENST00000395795 LINC00299Q6ZSB3 139 aa11.79□□□□□ -0.52
CXCL12-206ENST00000395795 TRPT1Q86TN4 253 aaKnown RBP11.79□□□□□ -0.52
CXCL12-206ENST00000395795 NPIPB3Q92617 1050 aa11.79□□□□□ -0.52
CXCL12-206ENST00000395795 GRAMD2BQ96HH9 432 aa11.79□□□□□ -0.52
CXCL12-206ENST00000395795 SCP2D1Q9UJQ7 156 aa11.79□□□□□ -0.52
CXCL12-206ENST00000395795 IGKV1D-37A0A075B6S9 117 aa11.78□□□□□ -0.52
CXCL12-206ENST00000395795 RPS10-NUDT3A0A1W2PQS6 291 aa11.78□□□□□ -0.52
CXCL12-206ENST00000395795 NUPR2A6NF83 97 aa11.78□□□□□ -0.52
CXCL12-206ENST00000395795 AKR1C4P17516 323 aa11.78□□□□□ -0.52
CXCL12-206ENST00000395795 OR10J1P30954 320 aa11.78□□□□□ -0.52
CXCL12-206ENST00000395795 OR11H2Q8NH07 326 aa11.78□□□□□ -0.52
CXCL12-206ENST00000395795 RARRES2Q99969 163 aa11.78□□□□□ -0.52
CXCL12-206ENST00000395795 C11orf68Q9H3H3 251 aaKnown RBP11.78□□□□□ -0.52
CXCL12-206ENST00000395795 RBKSQ9H477 322 aa11.78□□□□□ -0.52
CXCL12-206ENST00000395795 A0A1W2PS18 150 aa11.77□□□□□ -0.53
CXCL12-206ENST00000395795 DNASE2O00115 360 aaPredicted RBP11.77□□□□□ -0.53
CXCL12-206ENST00000395795 CA1P00915 261 aaPredicted RBP11.77□□□□□ -0.53
CXCL12-206ENST00000395795 C4BPBP20851 252 aa11.77□□□□□ -0.53
CXCL12-206ENST00000395795 CCR6P51684 374 aa11.77□□□□□ -0.53
CXCL12-206ENST00000395795 SMCO1Q147U7 214 aa11.77□□□□□ -0.53
CXCL12-206ENST00000395795 SPANXN2Q5MJ10 180 aa11.77□□□□□ -0.53
CXCL12-206ENST00000395795 CCDC190Q86UF4 302 aa11.77□□□□□ -0.53
CXCL12-206ENST00000395795 STXBP6Q8NFX7 210 aa11.77□□□□□ -0.53
CXCL12-206ENST00000395795 TMEM231Q9H6L2 316 aa11.77□□□□□ -0.53
CXCL12-206ENST00000395795 MCUBQ9NWR8 336 aa11.77□□□□□ -0.53
CXCL12-206ENST00000395795 RABAC1Q9UI14 185 aa11.77□□□□□ -0.53
CXCL12-206ENST00000395795 KCNIP3Q9Y2W7 256 aa11.77□□□□□ -0.53
CXCL12-206ENST00000395795 KNCNA6PVL3 124 aa11.76□□□□□ -0.53
CXCL12-206ENST00000395795 BUB3O43684 328 aa11.76□□□□□ -0.53
CXCL12-206ENST00000395795 TOMM40O96008 361 aa11.76□□□□□ -0.53
CXCL12-206ENST00000395795 ZNF688P0C7X2 276 aa11.76□□□□□ -0.53
CXCL12-206ENST00000395795 RPL11P62913 178 aaKnown RBP11.76□□□□□ -0.53
CXCL12-206ENST00000395795 Q8NAQ8 132 aa11.76□□□□□ -0.53
CXCL12-206ENST00000395795 CSNK1G2-AS1Q8NCQ2 148 aa11.76□□□□□ -0.53
CXCL12-206ENST00000395795 DTD1Q8TEA8 209 aa11.76□□□□□ -0.53
CXCL12-206ENST00000395795 DEFB4AO15263 64 aa11.75□□□□□ -0.53
CXCL12-206ENST00000395795 HNRNPCP07910 306 aaKnown RBP eCLIP11.75□□□□□ -0.53
CXCL12-206ENST00000395795 PSG1P11464 419 aa11.75□□□□□ -0.53
CXCL12-206ENST00000395795 NANOS2P60321 138 aaKnown RBP11.75□□□□□ -0.53
CXCL12-206ENST00000395795 LGI3Q8N145 548 aa11.75□□□□□ -0.53
CXCL12-206ENST00000395795 LRTM2Q8N967 370 aa11.75□□□□□ -0.53
CXCL12-206ENST00000395795 Q8WTZ3 238 aa11.75□□□□□ -0.53
CXCL12-206ENST00000395795 PHLDA1Q8WV24 401 aaPredicted RBP11.75□□□□□ -0.53
CXCL12-206ENST00000395795 ACY3Q96HD9 319 aa11.75□□□□□ -0.53
CXCL12-206ENST00000395795 SCGB3A2Q96PL1 93 aa11.75□□□□□ -0.53
CXCL12-206ENST00000395795 U3KQ87 197 aa11.75□□□□□ -0.53
CXCL12-206ENST00000395795 IL4P05112 153 aa11.74□□□□□ -0.53
CXCL12-206ENST00000395795 RBMY1A1P0DJD3 496 aaKnown RBP11.74□□□□□ -0.53
CXCL12-206ENST00000395795 RBMY1CP0DJD4 496 aa11.74□□□□□ -0.53
CXCL12-206ENST00000395795 GAMTQ14353 236 aa11.74□□□□□ -0.53
CXCL12-206ENST00000395795 RBMY1FQ15415 496 aaKnown RBP11.74□□□□□ -0.53
CXCL12-206ENST00000395795 X6R8D5 127 aa11.74□□□□□ -0.53
CXCL12-206ENST00000395795 VPS13DQ5THJ4 4388 aa11.74□□□□□ -0.53
CXCL12-206ENST00000395795 IGKV1OR2-108A0A075B7D4 117 aa11.73□□□□□ -0.53
CXCL12-206ENST00000395795 PRSS46E5RG02 174 aa11.73□□□□□ -0.53
CXCL12-206ENST00000395795 IFNA10P01566 189 aa11.73□□□□□ -0.53
CXCL12-206ENST00000395795 RD3LP0DJH9 198 aa11.73□□□□□ -0.53
CXCL12-206ENST00000395795 PYDC2Q56P42 97 aa11.73□□□□□ -0.53
CXCL12-206ENST00000395795 TMEM128Q5BJH2 165 aa11.73□□□□□ -0.53
CXCL12-206ENST00000395795 ETFRF1Q6IPR1 90 aa11.73□□□□□ -0.53
CXCL12-206ENST00000395795 TMEM217Q8N7C4 229 aa11.73□□□□□ -0.53
CXCL12-206ENST00000395795 S100ZQ8WXG8 99 aa11.73□□□□□ -0.53
CXCL12-206ENST00000395795 CACFD1Q9UGQ2 172 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms