RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 MCFD2Q8NI22 146 aa11.29□□□□□ -0.6
SNCA-205ENST00000394991 SLIRPQ9GZT3 109 aaKnown RBP11.29□□□□□ -0.6
SNCA-205ENST00000394991 MRPL36Q9P0J6 103 aaKnown RBP11.29□□□□□ -0.6
SNCA-205ENST00000394991 RAB3DO95716 219 aa11.28□□□□□ -0.6
SNCA-205ENST00000394991 IFNA21P01568 189 aa11.28□□□□□ -0.6
SNCA-205ENST00000394991 IFNA17P01571 189 aa11.28□□□□□ -0.6
SNCA-205ENST00000394991 TBPP20226 339 aa11.28□□□□□ -0.6
SNCA-205ENST00000394991 NPPCP23582 126 aa11.28□□□□□ -0.6
SNCA-205ENST00000394991 CRYBB3P26998 211 aa11.28□□□□□ -0.6
SNCA-205ENST00000394991 UCP3P55916 312 aa11.28□□□□□ -0.6
SNCA-205ENST00000394991 MRPS10P82664 201 aaKnown RBP11.28□□□□□ -0.6
SNCA-205ENST00000394991 SCGB2B2Q4G0G5 96 aa11.28□□□□□ -0.6
SNCA-205ENST00000394991 SPINK9Q5DT21 86 aa11.28□□□□□ -0.6
SNCA-205ENST00000394991 C1orf134Q5TEV5 83 aa11.28□□□□□ -0.6
SNCA-205ENST00000394991 ARRDC1Q8N5I2 433 aa11.28□□□□□ -0.6
SNCA-205ENST00000394991 OR4D10Q8NGI6 311 aa11.28□□□□□ -0.6
SNCA-205ENST00000394991 SEC22AQ96IW7 307 aa11.28□□□□□ -0.6
SNCA-205ENST00000394991 RAB40CQ96S21 281 aa11.28□□□□□ -0.6
SNCA-205ENST00000394991 XCL2Q9UBD3 114 aa11.28□□□□□ -0.6
SNCA-205ENST00000394991 A0A1W2PS18 150 aa11.27□□□□□ -0.61
SNCA-205ENST00000394991 C16orf90A8MZG2 172 aa11.27□□□□□ -0.61
SNCA-205ENST00000394991 IGKV1-39P01597 117 aa11.27□□□□□ -0.61
SNCA-205ENST00000394991 IGKV1D-39P04432 117 aa11.27□□□□□ -0.61
SNCA-205ENST00000394991 PI3P19957 117 aa11.27□□□□□ -0.61
SNCA-205ENST00000394991 TNFSF8P32971 234 aa11.27□□□□□ -0.61
SNCA-205ENST00000394991 TNP2Q05952 138 aa11.27□□□□□ -0.61
SNCA-205ENST00000394991 PSMG4Q5JS54 123 aa11.27□□□□□ -0.61
SNCA-205ENST00000394991 STEAP1BQ6NZ63 245 aa11.27□□□□□ -0.61
SNCA-205ENST00000394991 SMIM4Q8WVI0 70 aa11.27□□□□□ -0.61
SNCA-205ENST00000394991 RABL2AQ9UBK7 228 aaPredicted RBP11.27□□□□□ -0.61
SNCA-205ENST00000394991 RABL2BQ9UNT1 228 aa11.27□□□□□ -0.61
SNCA-205ENST00000394991 FABP12A6NFH5 140 aa11.26□□□□□ -0.61
SNCA-205ENST00000394991 HSPE1P61604 102 aaKnown RBP11.26□□□□□ -0.61
SNCA-205ENST00000394991 SSBP1Q04837 148 aaKnown RBP11.26□□□□□ -0.61
SNCA-205ENST00000394991 FAAP20Q6NZ36 180 aa11.26□□□□□ -0.61
SNCA-205ENST00000394991 LHFPL1Q86WI0 220 aa11.26□□□□□ -0.61
SNCA-205ENST00000394991 OR4A16Q8NH70 328 aa11.26□□□□□ -0.61
SNCA-205ENST00000394991 METTL26Q96S19 204 aa11.26□□□□□ -0.61
SNCA-205ENST00000394991 RSL24D1Q9UHA3 163 aaKnown RBP11.26□□□□□ -0.61
SNCA-205ENST00000394991 CTDSPLO15194 276 aa11.25□□□□□ -0.61
SNCA-205ENST00000394991 PIGPP57054 158 aa11.25□□□□□ -0.61
SNCA-205ENST00000394991 ERHP84090 104 aaKnown RBP11.25□□□□□ -0.61
SNCA-205ENST00000394991 DHRS2Q13268 280 aa11.25□□□□□ -0.61
SNCA-205ENST00000394991 MEF2DQ14814 521 aa11.25□□□□□ -0.61
SNCA-205ENST00000394991 IZUMO4Q1ZYL8 232 aa11.25□□□□□ -0.61
SNCA-205ENST00000394991 RNF212Q495C1 297 aa11.25□□□□□ -0.61
SNCA-205ENST00000394991 H2BFWTQ7Z2G1 175 aa11.25□□□□□ -0.61
SNCA-205ENST00000394991 TERB2Q8NHR7 220 aa11.25□□□□□ -0.61
SNCA-205ENST00000394991 FAM210BQ96KR6 192 aa11.25□□□□□ -0.61
SNCA-205ENST00000394991 FNDC4Q9H6D8 234 aaPredicted RBP11.25□□□□□ -0.61
SNCA-205ENST00000394991 HERC1Q15751 4861 aa11.25□□□□□ -0.61
SNCA-205ENST00000394991 HELTA6NFD8 242 aa11.24□□□□□ -0.61
SNCA-205ENST00000394991 DISC1C4P0D8 188 aa11.24□□□□□ -0.61
SNCA-205ENST00000394991 SPART-AS1P0CW21 52 aa11.24□□□□□ -0.61
SNCA-205ENST00000394991 AKAIN1P0CW23 69 aa11.24□□□□□ -0.61
SNCA-205ENST00000394991 EMP1P54849 157 aa11.24□□□□□ -0.61
SNCA-205ENST00000394991 ZNF705AQ6ZN79 300 aaPredicted RBP11.24□□□□□ -0.61
SNCA-205ENST00000394991 ZFAND1Q8TCF1 268 aa11.24□□□□□ -0.61
SNCA-205ENST00000394991 MARCH1Q8TCQ1 289 aa11.24□□□□□ -0.61
SNCA-205ENST00000394991 MRGPRFQ96AM1 343 aa11.24□□□□□ -0.61
SNCA-205ENST00000394991 ZNF486Q96H40 463 aaPredicted RBP11.24□□□□□ -0.61
SNCA-205ENST00000394991 NEU1Q99519 415 aa11.24□□□□□ -0.61
SNCA-205ENST00000394991 C1QTNF4Q9BXJ3 329 aa11.24□□□□□ -0.61
SNCA-205ENST00000394991 FAM212BQ9NTI7 297 aaPredicted RBP11.24□□□□□ -0.61
SNCA-205ENST00000394991 COPZ2Q9P299 210 aa11.24□□□□□ -0.61
SNCA-205ENST00000394991 U3KQE9 123 aa11.24□□□□□ -0.61
SNCA-205ENST00000394991 ZNF705FA8MVS1 300 aaPredicted RBP11.23□□□□□ -0.61
SNCA-205ENST00000394991 H3BMM0 161 aa11.23□□□□□ -0.61
SNCA-205ENST00000394991 CLN5O75503 358 aa11.23□□□□□ -0.61
SNCA-205ENST00000394991 ZNF705DP0CH99 300 aaPredicted RBP11.23□□□□□ -0.61
SNCA-205ENST00000394991 ZNF705BP0CI00 300 aaPredicted RBP11.23□□□□□ -0.61
SNCA-205ENST00000394991 RNASE2P10153 161 aaKnown RBP11.23□□□□□ -0.61
SNCA-205ENST00000394991 RND3P61587 244 aa11.23□□□□□ -0.61
SNCA-205ENST00000394991 MLANAQ16655 118 aa11.23□□□□□ -0.61
SNCA-205ENST00000394991 Q8N1X5 172 aa11.23□□□□□ -0.61
SNCA-205ENST00000394991 CCDC71LQ8N9Z2 235 aa11.23□□□□□ -0.61
SNCA-205ENST00000394991 OR4C16Q8NGL9 310 aa11.23□□□□□ -0.61
SNCA-205ENST00000394991 OR13C8Q8NGS7 320 aa11.23□□□□□ -0.61
SNCA-205ENST00000394991 GLMPQ8WWB7 406 aa11.23□□□□□ -0.61
SNCA-205ENST00000394991 RBM38Q9H0Z9 239 aaKnown RBP11.23□□□□□ -0.61
SNCA-205ENST00000394991 C3orf85A0A1B0GTC6 90 aa11.22□□□□□ -0.61
SNCA-205ENST00000394991 FAM90A26D6RGX4 464 aa11.22□□□□□ -0.61
SNCA-205ENST00000394991 GSTZ1O43708 216 aaPredicted RBP11.22□□□□□ -0.61
SNCA-205ENST00000394991 IGKV1-17P01599 117 aa11.22□□□□□ -0.61
SNCA-205ENST00000394991 S100A5P33763 92 aa11.22□□□□□ -0.61
SNCA-205ENST00000394991 TIGITQ495A1 244 aa11.22□□□□□ -0.61
SNCA-205ENST00000394991 PYDC2Q56P42 97 aa11.22□□□□□ -0.61
SNCA-205ENST00000394991 C16orf54Q6UWD8 224 aa11.22□□□□□ -0.61
SNCA-205ENST00000394991 TMEM230Q96A57 120 aa11.22□□□□□ -0.61
SNCA-205ENST00000394991 TP53RKQ96S44 253 aa11.22□□□□□ -0.61
SNCA-205ENST00000394991 DKK2Q9UBU2 259 aa11.22□□□□□ -0.61
SNCA-205ENST00000394991 C14orf166Q9Y224 244 aaKnown RBP11.22□□□□□ -0.61
SNCA-205ENST00000394991 DNAH5Q8TE73 4624 aa11.22□□□□□ -0.61
SNCA-205ENST00000394991 ANKRD20A5PA0PJZ0 165 aa11.21□□□□□ -0.61
SNCA-205ENST00000394991 INS-IGF2F8WCM5 200 aa11.21□□□□□ -0.61
SNCA-205ENST00000394991 HTN3P15516 51 aa11.21□□□□□ -0.61
SNCA-205ENST00000394991 SNCAP37840 140 aa11.21□□□□□ -0.61
SNCA-205ENST00000394991 NUTF2P61970 127 aaKnown RBP11.21□□□□□ -0.61
SNCA-205ENST00000394991 SP6Q3SY56 376 aa11.21□□□□□ -0.61
SNCA-205ENST00000394991 FAM222AQ5U5X8 452 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms