RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ARF6P62330 175 aa8.38□□□□□ -1.07
POLR2J3-201ENST00000379340 CCDC144NLQ6NUI1 221 aa8.38□□□□□ -1.07
POLR2J3-201ENST00000379340 NPBQ8NG41 125 aa8.38□□□□□ -1.07
POLR2J3-201ENST00000379340 OR51G1Q8NGK1 321 aa8.38□□□□□ -1.07
POLR2J3-201ENST00000379340 NPIPB3Q92617 1050 aa8.38□□□□□ -1.07
POLR2J3-201ENST00000379340 SRD5A3Q9H8P0 318 aa8.38□□□□□ -1.07
POLR2J3-201ENST00000379340 F11RQ9Y624 299 aaKnown RBP8.38□□□□□ -1.07
POLR2J3-201ENST00000379340 MALRD1Q5VYJ5 2156 aa8.38□□□□□ -1.07
POLR2J3-201ENST00000379340 IGKV1D-37A0A075B6S9 117 aa8.37□□□□□ -1.07
POLR2J3-201ENST00000379340 SCO2A0A1W2PP80 73 aa8.37□□□□□ -1.07
POLR2J3-201ENST00000379340 TEX22C9J3V5 150 aa8.37□□□□□ -1.07
POLR2J3-201ENST00000379340 TIMM23O14925 209 aa8.37□□□□□ -1.07
POLR2J3-201ENST00000379340 NBR2O15453 112 aa8.37□□□□□ -1.07
POLR2J3-201ENST00000379340 OR7C2O60412 319 aa8.37□□□□□ -1.07
POLR2J3-201ENST00000379340 FOXH1O75593 365 aa8.37□□□□□ -1.07
POLR2J3-201ENST00000379340 NDUFA3O95167 84 aa8.37□□□□□ -1.07
POLR2J3-201ENST00000379340 CNTFRP26992 372 aa8.37□□□□□ -1.07
POLR2J3-201ENST00000379340 RPL35P42766 123 aaKnown RBP8.37□□□□□ -1.07
POLR2J3-201ENST00000379340 FABP9Q0Z7S8 132 aa8.37□□□□□ -1.07
POLR2J3-201ENST00000379340 PLGLAQ15195 96 aa8.37□□□□□ -1.07
POLR2J3-201ENST00000379340 MINOS1Q5TGZ0 78 aa8.37□□□□□ -1.07
POLR2J3-201ENST00000379340 C10orf113Q5VZT2 155 aa8.37□□□□□ -1.07
POLR2J3-201ENST00000379340 TMEM116Q8NCL8 245 aa8.37□□□□□ -1.07
POLR2J3-201ENST00000379340 STXBP6Q8NFX7 210 aa8.37□□□□□ -1.07
POLR2J3-201ENST00000379340 SRSF12Q8WXF0 261 aaKnown RBP8.37□□□□□ -1.07
POLR2J3-201ENST00000379340 TMEM37Q8WXS4 190 aa8.37□□□□□ -1.07
POLR2J3-201ENST00000379340 CFHR4Q92496 578 aa8.37□□□□□ -1.07
POLR2J3-201ENST00000379340 FBXL15Q9H469 300 aa8.37□□□□□ -1.07
POLR2J3-201ENST00000379340 UBTD1Q9HAC8 227 aa8.37□□□□□ -1.07
POLR2J3-201ENST00000379340 MINOS1-NBL1R4GNA1 71 aa8.37□□□□□ -1.07
POLR2J3-201ENST00000379340 MAP1AP78559 2803 aaPredicted RBP8.37□□□□□ -1.07
POLR2J3-201ENST00000379340 GGCTO75223 188 aaKnown RBP8.36□□□□□ -1.07
POLR2J3-201ENST00000379340 MOSP00540 346 aa8.36□□□□□ -1.07
POLR2J3-201ENST00000379340 GATA2P23769 480 aaPredicted RBP8.36□□□□□ -1.07
POLR2J3-201ENST00000379340 CDKN1AP38936 164 aa8.36□□□□□ -1.07
POLR2J3-201ENST00000379340 DLX1P56177 255 aa8.36□□□□□ -1.07
POLR2J3-201ENST00000379340 LCN2P80188 198 aa8.36□□□□□ -1.07
POLR2J3-201ENST00000379340 HCP5Q6MZN7 132 aa8.36□□□□□ -1.07
POLR2J3-201ENST00000379340 OR2T10Q8NGZ9 312 aa8.36□□□□□ -1.07
POLR2J3-201ENST00000379340 OR4X1Q8NH49 305 aa8.36□□□□□ -1.07
POLR2J3-201ENST00000379340 ZNF503Q96F45 646 aa8.36□□□□□ -1.07
POLR2J3-201ENST00000379340 MISP3Q96FF7 219 aa8.36□□□□□ -1.07
POLR2J3-201ENST00000379340 TNFRSF19Q9NS68 423 aa8.36□□□□□ -1.07
POLR2J3-201ENST00000379340 TRAV9-1A0A075B6T8 112 aa8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 A0A1W2PPR1 153 aa8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 PPP5D1E7EU14 171 aa8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 TYMSP04818 313 aa8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 REG1AP05451 166 aa8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 FAM3BP58499 235 aaPredicted RBP8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 PLP1P60201 277 aa8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 MMDQ15546 238 aa8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 PERPQ96FX8 193 aa8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 FAM167A-AS1Q96KT0 104 aa8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 DERL1Q9BUN8 251 aa8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 SLC25A2Q9BXI2 301 aa8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 TBL2Q9Y4P3 447 aaKnown RBP8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 PRRC2AP48634 2157 aaKnown RBP8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 TRGC2P03986 189 aa8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 FABP1P07148 127 aa8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 SMIM6P0DI80 62 aa8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 HOXA5P20719 270 aa8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 MFAP2P55001 183 aa8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 UBE2L3P68036 154 aaKnown RBP8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 SSBP2P81877 361 aaPredicted RBP8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 FOXL1Q12952 345 aa8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 VMO1Q7Z5L0 202 aa8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 OR5AU1Q8NGC0 362 aa8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 TMEM190Q8WZ59 177 aa8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 SFRP2Q96HF1 295 aa8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 ZNF355PQ9NSJ1 428 aa8.35□□□□□ -1.07
POLR2J3-201ENST00000379340 ZNF469Q96JG9 3925 aaPredicted RBP8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 TRBV20OR9-2A0A075B6H5 130 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 IGHV2-70DA0A0C4DH43 119 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 HELTA6NFD8 242 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 HIST1H2BKO60814 126 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 CNIH1O95406 144 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 S100A9P06702 114 aaKnown RBP8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 HIST1H2BJP06899 126 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 HIST1H2BOP23527 126 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 HIST1H2BBP33778 126 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 MEOX2P50222 304 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 LGALS4P56470 323 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 HIST1H2BDP58876 126 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 HIST1H2BCP62807 126 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 ZNF90Q03938 601 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 PRB3Q04118 309 aaPredicted RBP8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 KLRD1Q13241 179 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 EBI3Q14213 229 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 HIST2H2BEQ16778 126 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 LDLRAD2Q5SZI1 272 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 TEX38Q6PEX7 206 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 PATE2Q6UY27 113 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 OR10G8Q8NGN5 311 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 HIST1H2BHQ93079 126 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 EAF1Q96JC9 268 aaPredicted RBP8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 HIST1H2BNQ99877 126 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 HIST1H2BMQ99879 126 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 PAXXQ9BUH6 204 aa8.34□□□□□ -1.07
POLR2J3-201ENST00000379340 TMUB1Q9BVT8 246 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms