RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 LILRA5A6NI73 299 aa9.03□□□□□ -0.96
USP6NL-202ENST00000379237 FOLR3P41439 243 aa9.03□□□□□ -0.96
USP6NL-202ENST00000379237 KIR2DL2P43627 348 aaPredicted RBP9.03□□□□□ -0.96
USP6NL-202ENST00000379237 REG1BP48304 166 aa9.03□□□□□ -0.96
USP6NL-202ENST00000379237 KLF5Q13887 457 aaPredicted RBP9.03□□□□□ -0.96
USP6NL-202ENST00000379237 LCNL1Q6ZST4 164 aa9.03□□□□□ -0.96
USP6NL-202ENST00000379237 NEGR1Q7Z3B1 354 aa9.03□□□□□ -0.96
USP6NL-202ENST00000379237 BOKQ9UMX3 212 aaPredicted RBP9.03□□□□□ -0.96
USP6NL-202ENST00000379237 GGTLC3B5MD39 225 aa9.03□□□□□ -0.96
USP6NL-202ENST00000379237 SLC22A18ASQ8N1D0 253 aa9.03□□□□□ -0.96
USP6NL-202ENST00000379237 FGFBP3Q8TAT2 258 aa9.03□□□□□ -0.96
USP6NL-202ENST00000379237 PCDH15Q96QU1 1955 aa9.03□□□□□ -0.96
USP6NL-202ENST00000379237 RNPS1Q15287 305 aaKnown RBP9.03□□□□□ -0.96
USP6NL-202ENST00000379237 RPS19BP1Q86WX3 136 aaKnown RBP9.03□□□□□ -0.96
USP6NL-202ENST00000379237 DUSP23Q9BVJ7 150 aa9.03□□□□□ -0.96
USP6NL-202ENST00000379237 PLA2G2FQ9BZM2 168 aa9.03□□□□□ -0.96
USP6NL-202ENST00000379237 TMEM160Q9NX00 188 aa9.03□□□□□ -0.96
USP6NL-202ENST00000379237 DYSFO75923 2080 aa9.03□□□□□ -0.96
USP6NL-202ENST00000379237 A0A1B0GUT8 65 aa9.03□□□□□ -0.96
USP6NL-202ENST00000379237 CKS2P33552 79 aa9.03□□□□□ -0.96
USP6NL-202ENST00000379237 HSPE1P61604 102 aaKnown RBP9.03□□□□□ -0.96
USP6NL-202ENST00000379237 GAB4Q2WGN9 574 aa9.03□□□□□ -0.96
USP6NL-202ENST00000379237 ACP7Q6ZNF0 438 aa9.03□□□□□ -0.96
USP6NL-202ENST00000379237 CRIPAKQ8N1N5 446 aa9.03□□□□□ -0.96
USP6NL-202ENST00000379237 REPIN1Q9BWE0 567 aaKnown RBP9.03□□□□□ -0.96
USP6NL-202ENST00000379237 SOX21Q9Y651 276 aaPredicted RBP9.03□□□□□ -0.96
USP6NL-202ENST00000379237 GPR82Q96P67 336 aa9.02□□□□□ -0.97
USP6NL-202ENST00000379237 LINC01565O15544 149 aa9.02□□□□□ -0.97
USP6NL-202ENST00000379237 TIMM8AO60220 97 aaPredicted RBP9.02□□□□□ -0.97
USP6NL-202ENST00000379237 PPP1R32Q7Z5V6 425 aa9.02□□□□□ -0.97
USP6NL-202ENST00000379237 TDHQ8IZJ6 230 aa9.02□□□□□ -0.97
USP6NL-202ENST00000379237 IFI27L1Q96BM0 104 aa9.02□□□□□ -0.97
USP6NL-202ENST00000379237 RNF183Q96D59 192 aa9.02□□□□□ -0.97
USP6NL-202ENST00000379237 PRDM14Q9GZV8 571 aa9.02□□□□□ -0.97
USP6NL-202ENST00000379237 NBASA2RRP1 2371 aa9.02□□□□□ -0.97
USP6NL-202ENST00000379237 SPTBN5Q9NRC6 3674 aaKnown RBP9.02□□□□□ -0.97
USP6NL-202ENST00000379237 CCL3P10147 92 aa9.02□□□□□ -0.97
USP6NL-202ENST00000379237 SUB1P53999 127 aaKnown RBP eCLIP9.02□□□□□ -0.97
USP6NL-202ENST00000379237 GAGE2BQ13066 116 aa9.02□□□□□ -0.97
USP6NL-202ENST00000379237 GAGE2EQ4V326 116 aa9.02□□□□□ -0.97
USP6NL-202ENST00000379237 TCTEX1D4Q5JR98 221 aa9.02□□□□□ -0.97
USP6NL-202ENST00000379237 PCP2Q8IVA1 136 aa9.02□□□□□ -0.97
USP6NL-202ENST00000379237 FER1L6-AS2Q96M78 137 aa9.02□□□□□ -0.97
USP6NL-202ENST00000379237 GAGE2DQ9UEU5 116 aa9.02□□□□□ -0.97
USP6NL-202ENST00000379237 NCBP2LA6PVI3 153 aaKnown RBP9.01□□□□□ -0.97
USP6NL-202ENST00000379237 NKX2-8O15522 239 aa9.01□□□□□ -0.97
USP6NL-202ENST00000379237 TBC1D28Q2M2D7 210 aa9.01□□□□□ -0.97
USP6NL-202ENST00000379237 SPAG8Q99932 426 aaPredicted RBP9.01□□□□□ -0.97
USP6NL-202ENST00000379237 CHAC1Q9BUX1 264 aa9.01□□□□□ -0.97
USP6NL-202ENST00000379237 SRXN1Q9BYN0 137 aa9.01□□□□□ -0.97
USP6NL-202ENST00000379237 OBP2AQ9NY56 170 aa9.01□□□□□ -0.97
USP6NL-202ENST00000379237 PRELID3AQ96N28 172 aa9.01□□□□□ -0.97
USP6NL-202ENST00000379237 K7EMI3 77 aa9.01□□□□□ -0.97
USP6NL-202ENST00000379237 LINC00271P0C7V0 271 aa9.01□□□□□ -0.97
USP6NL-202ENST00000379237 KIR2DL1P43626 348 aaPredicted RBP9.01□□□□□ -0.97
USP6NL-202ENST00000379237 RNFT1Q5M7Z0 435 aa9.01□□□□□ -0.97
USP6NL-202ENST00000379237 FAM53AQ6NSI3 398 aaPredicted RBP9.01□□□□□ -0.97
USP6NL-202ENST00000379237 RPL39P5Q59GN2 51 aa9.01□□□□□ -0.97
USP6NL-202ENST00000379237 UFSP1Q6NVU6 142 aa9.01□□□□□ -0.97
USP6NL-202ENST00000379237 C8orf86Q6ZUL3 223 aa9.01□□□□□ -0.97
USP6NL-202ENST00000379237 RPEQ96AT9 228 aa9.01□□□□□ -0.97
USP6NL-202ENST00000379237 CFHR5Q9BXR6 569 aa9.01□□□□□ -0.97
USP6NL-202ENST00000379237 Q1RN00 199 aa9□□□□□ -0.97
USP6NL-202ENST00000379237 INO80CQ6PI98 192 aaPredicted RBP9□□□□□ -0.97
USP6NL-202ENST00000379237 OR9G1Q8NH87 305 aa9□□□□□ -0.97
USP6NL-202ENST00000379237 UBE2ZQ9H832 354 aaPredicted RBP9□□□□□ -0.97
USP6NL-202ENST00000379237 ZNF497Q6ZNH5 498 aa9□□□□□ -0.97
USP6NL-202ENST00000379237 ZNF826PQ6ZT77 177 aa9□□□□□ -0.97
USP6NL-202ENST00000379237 ZNF441Q8N8Z8 693 aa9□□□□□ -0.97
USP6NL-202ENST00000379237 NEU4Q8WWR8 484 aaPredicted RBP9□□□□□ -0.97
USP6NL-202ENST00000379237 LINC00473A8K010 186 aa9□□□□□ -0.97
USP6NL-202ENST00000379237 PMS2P5A8MQ11 134 aa9□□□□□ -0.97
USP6NL-202ENST00000379237 GFRA3O60609 400 aa9□□□□□ -0.97
USP6NL-202ENST00000379237 HBDP02042 147 aa9□□□□□ -0.97
USP6NL-202ENST00000379237 ACP1P24666 158 aa9□□□□□ -0.97
USP6NL-202ENST00000379237 GTSCR1Q86UQ5 136 aa9□□□□□ -0.97
USP6NL-202ENST00000379237 FADS6Q8N9I5 356 aa9□□□□□ -0.97
USP6NL-202ENST00000379237 MRPL32Q9BYC8 188 aaKnown RBP9□□□□□ -0.97
USP6NL-202ENST00000379237 C1RLQ9NZP8 487 aa9□□□□□ -0.97
USP6NL-202ENST00000379237 FER1L5A0AVI2 2057 aa8.99□□□□□ -0.97
USP6NL-202ENST00000379237 KIAA1549LQ6ZVL6 1849 aa8.99□□□□□ -0.97
USP6NL-202ENST00000379237 TRAV8-2A0A0B4J237 113 aa8.99□□□□□ -0.97
USP6NL-202ENST00000379237 TRAV3A0A0B4J244 114 aa8.99□□□□□ -0.97
USP6NL-202ENST00000379237 A0A1W2PQF6 199 aa8.99□□□□□ -0.97
USP6NL-202ENST00000379237 A0A1W2PRD5 423 aa8.99□□□□□ -0.97
USP6NL-202ENST00000379237 A0A1W2PRF3 423 aa8.99□□□□□ -0.97
USP6NL-202ENST00000379237 A0A1W2PRM7 423 aa8.99□□□□□ -0.97
USP6NL-202ENST00000379237 CD27P26842 260 aa8.99□□□□□ -0.97
USP6NL-202ENST00000379237 TMEM178AQ8NBL3 297 aa8.99□□□□□ -0.97
USP6NL-202ENST00000379237 PRNDQ9UKY0 176 aa8.99□□□□□ -0.97
USP6NL-202ENST00000379237 WIPF2Q8TF74 440 aaPredicted RBP8.99□□□□□ -0.97
USP6NL-202ENST00000379237 C20orf78Q9BR46 151 aa8.99□□□□□ -0.97
USP6NL-202ENST00000379237 SPEGQ15772 3267 aa8.99□□□□□ -0.97
USP6NL-202ENST00000379237 IFI27P40305 119 aaPredicted RBP8.99□□□□□ -0.97
USP6NL-202ENST00000379237 FOXC2Q99958 501 aa8.99□□□□□ -0.97
USP6NL-202ENST00000379237 PKIBQ9C010 78 aa8.99□□□□□ -0.97
USP6NL-202ENST00000379237 RAB9BQ9NP90 201 aa8.99□□□□□ -0.97
USP6NL-202ENST00000379237 COLQQ9Y215 455 aaPredicted RBP8.99□□□□□ -0.97
USP6NL-202ENST00000379237 AKAP6Q13023 2319 aa8.99□□□□□ -0.97
USP6NL-202ENST00000379237 PRB4P10163 310 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 166.8 ms