RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 ISLRO14498 428 aa11.83□□□□□ -0.52
TCOF1-202ENST00000377797 DYNLRB2Q8TF09 96 aa11.83□□□□□ -0.52
TCOF1-202ENST00000377797 SFRP2Q96HF1 295 aa11.83□□□□□ -0.52
TCOF1-202ENST00000377797 CHD8Q9HCK8 2581 aa11.83□□□□□ -0.52
TCOF1-202ENST00000377797 CLEC19AQ6UXS0 136 aa11.83□□□□□ -0.52
TCOF1-202ENST00000377797 CENPVQ7Z7K6 275 aaPredicted RBP11.83□□□□□ -0.52
TCOF1-202ENST00000377797 OR1P1Q8NH06 330 aa11.83□□□□□ -0.52
TCOF1-202ENST00000377797 SIGLEC9Q9Y336 463 aa11.83□□□□□ -0.52
TCOF1-202ENST00000377797 CCKARP32238 428 aa11.82□□□□□ -0.52
TCOF1-202ENST00000377797 MINOS1Q5TGZ0 78 aa11.82□□□□□ -0.52
TCOF1-202ENST00000377797 MINOS1-NBL1R4GNA1 71 aa11.82□□□□□ -0.52
TCOF1-202ENST00000377797 CD5P06127 495 aa11.82□□□□□ -0.52
TCOF1-202ENST00000377797 PTTG1IPP53801 180 aa11.82□□□□□ -0.52
TCOF1-202ENST00000377797 ZNF738Q8NE65 137 aa11.82□□□□□ -0.52
TCOF1-202ENST00000377797 SDF2L1Q9HCN8 221 aa11.82□□□□□ -0.52
TCOF1-202ENST00000377797 YTHDF2Q9Y5A9 579 aaKnown RBP11.82□□□□□ -0.52
TCOF1-202ENST00000377797 CHD9Q3L8U1 2897 aa11.82□□□□□ -0.52
TCOF1-202ENST00000377797 OR2T8A6NH00 312 aa11.82□□□□□ -0.52
TCOF1-202ENST00000377797 A6NNC1 897 aa11.82□□□□□ -0.52
TCOF1-202ENST00000377797 OOSP1A8MZH6 123 aa11.82□□□□□ -0.52
TCOF1-202ENST00000377797 F5H697 171 aa11.82□□□□□ -0.52
TCOF1-202ENST00000377797 ID1P41134 155 aa11.82□□□□□ -0.52
TCOF1-202ENST00000377797 RNF5Q99942 180 aa11.82□□□□□ -0.52
TCOF1-202ENST00000377797 REG4Q9BYZ8 158 aa11.82□□□□□ -0.52
TCOF1-202ENST00000377797 NUP210LQ5VU65 1888 aa11.81□□□□□ -0.52
TCOF1-202ENST00000377797 PAX9P55771 341 aa11.81□□□□□ -0.52
TCOF1-202ENST00000377797 LEMD1Q68G75 181 aa11.81□□□□□ -0.52
TCOF1-202ENST00000377797 BRD3OSQ6XYD6 125 aa11.81□□□□□ -0.52
TCOF1-202ENST00000377797 LINC00527Q9UJ94 153 aa11.81□□□□□ -0.52
TCOF1-202ENST00000377797 IGHV3-66A0A0C4DH42 116 aa11.81□□□□□ -0.52
TCOF1-202ENST00000377797 PSG9Q00887 426 aa11.81□□□□□ -0.52
TCOF1-202ENST00000377797 IGHV3-11P01762 117 aa11.81□□□□□ -0.52
TCOF1-202ENST00000377797 APCSP02743 223 aa11.81□□□□□ -0.52
TCOF1-202ENST00000377797 PYYP10082 97 aa11.81□□□□□ -0.52
TCOF1-202ENST00000377797 HTN1P15515 57 aa11.81□□□□□ -0.52
TCOF1-202ENST00000377797 FAM71F2Q6NXP2 309 aa11.81□□□□□ -0.52
TCOF1-202ENST00000377797 MGST2Q99735 147 aa11.81□□□□□ -0.52
TCOF1-202ENST00000377797 KLF17Q5JT82 389 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-202ENST00000377797 SIAH2O43255 324 aa11.8□□□□□ -0.52
TCOF1-202ENST00000377797 RHOGP84095 191 aa11.8□□□□□ -0.52
TCOF1-202ENST00000377797 C5orf64Q2M2E5 130 aa11.8□□□□□ -0.52
TCOF1-202ENST00000377797 TMEM219Q86XT9 240 aa11.8□□□□□ -0.52
TCOF1-202ENST00000377797 LAMA3Q16787 3333 aa11.8□□□□□ -0.52
TCOF1-202ENST00000377797 TMEM189A5PLL7 270 aa11.8□□□□□ -0.52
TCOF1-202ENST00000377797 SOD3P08294 240 aa11.8□□□□□ -0.52
TCOF1-202ENST00000377797 MLANAQ16655 118 aa11.8□□□□□ -0.52
TCOF1-202ENST00000377797 TM4SF20Q53R12 229 aa11.8□□□□□ -0.52
TCOF1-202ENST00000377797 PEX7O00628 323 aa11.8□□□□□ -0.52
TCOF1-202ENST00000377797 MSMPQ1L6U9 139 aa11.8□□□□□ -0.52
TCOF1-202ENST00000377797 BRCA2P51587 3418 aa11.8□□□□□ -0.52
TCOF1-202ENST00000377797 TRAV1-1A0A0B4J248 108 aa11.8□□□□□ -0.52
TCOF1-202ENST00000377797 DSCR9P59020 149 aa11.8□□□□□ -0.52
TCOF1-202ENST00000377797 IL15RAQ13261 267 aa11.8□□□□□ -0.52
TCOF1-202ENST00000377797 OR10J6PQ8NGY7 276 aa11.8□□□□□ -0.52
TCOF1-202ENST00000377797 RNF125Q96EQ8 232 aa11.8□□□□□ -0.52
TCOF1-202ENST00000377797 A0A0G2JLM5 398 aa11.79□□□□□ -0.52
TCOF1-202ENST00000377797 B4DSR2 109 aa11.79□□□□□ -0.52
TCOF1-202ENST00000377797 CCDC168Q8NDH2 2452 aa11.79□□□□□ -0.52
TCOF1-202ENST00000377797 MT-ND6P03923 174 aa11.79□□□□□ -0.52
TCOF1-202ENST00000377797 STAG3L2P0CL84 134 aa11.79□□□□□ -0.52
TCOF1-202ENST00000377797 STAG3L3P0CL85 134 aa11.79□□□□□ -0.52
TCOF1-202ENST00000377797 CX3CL1P78423 397 aa11.79□□□□□ -0.52
TCOF1-202ENST00000377797 SEPSECSQ9HD40 501 aaKnown RBP11.79□□□□□ -0.52
TCOF1-202ENST00000377797 AREGP15514 252 aa11.79□□□□□ -0.52
TCOF1-202ENST00000377797 RPL23P62829 140 aaKnown RBP11.79□□□□□ -0.52
TCOF1-202ENST00000377797 KAAG1Q9UBP8 84 aa11.79□□□□□ -0.52
TCOF1-202ENST00000377797 LHBP01229 141 aa11.79□□□□□ -0.52
TCOF1-202ENST00000377797 RNASE2P10153 161 aaKnown RBP11.79□□□□□ -0.52
TCOF1-202ENST00000377797 GUSBP1Q15486 140 aa11.79□□□□□ -0.52
TCOF1-202ENST00000377797 HAX1O00165 279 aa11.78□□□□□ -0.52
TCOF1-202ENST00000377797 SLC17A3O00476 420 aa11.78□□□□□ -0.52
TCOF1-202ENST00000377797 NDUFS7O75251 213 aa11.78□□□□□ -0.52
TCOF1-202ENST00000377797 OR5AN1Q8NGI8 311 aa11.78□□□□□ -0.52
TCOF1-202ENST00000377797 SPATA31B1PQ5VZV4 182 aa11.78□□□□□ -0.52
TCOF1-202ENST00000377797 PVRIGQ6DKI7 326 aa11.78□□□□□ -0.52
TCOF1-202ENST00000377797 LHFPL4Q7Z7J7 247 aa11.78□□□□□ -0.52
TCOF1-202ENST00000377797 BEND2Q8NDZ0 799 aa11.78□□□□□ -0.52
TCOF1-202ENST00000377797 CTSZQ9UBR2 303 aa11.78□□□□□ -0.52
TCOF1-202ENST00000377797 NPFFO15130 113 aa11.78□□□□□ -0.52
TCOF1-202ENST00000377797 PKIAP61925 76 aa11.78□□□□□ -0.52
TCOF1-202ENST00000377797 TRAV5A0A0B4J249 113 aa11.78□□□□□ -0.52
TCOF1-202ENST00000377797 C11orf42Q8N5U0 333 aa11.78□□□□□ -0.52
TCOF1-202ENST00000377797 AGMATQ9BSE5 352 aa11.78□□□□□ -0.52
TCOF1-202ENST00000377797 TMEM14BQ9NUH8 114 aa11.78□□□□□ -0.52
TCOF1-202ENST00000377797 M0QZK8 103 aa11.77□□□□□ -0.52
TCOF1-202ENST00000377797 HLA-DRB1P01911 266 aa11.77□□□□□ -0.52
TCOF1-202ENST00000377797 SAA4P35542 130 aa11.77□□□□□ -0.52
TCOF1-202ENST00000377797 CYB5R2Q6BCY4 276 aa11.77□□□□□ -0.52
TCOF1-202ENST00000377797 SPANXN1Q5VSR9 72 aa11.77□□□□□ -0.53
TCOF1-202ENST00000377797 PGLYRP4Q96LB8 373 aa11.77□□□□□ -0.53
TCOF1-202ENST00000377797 A0A1W2PRE2 83 aa11.77□□□□□ -0.53
TCOF1-202ENST00000377797 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.77□□□□□ -0.53
TCOF1-202ENST00000377797 Q6ZN92 141 aa11.77□□□□□ -0.53
TCOF1-202ENST00000377797 ZNF833PQ6ZTB9 187 aa11.77□□□□□ -0.53
TCOF1-202ENST00000377797 Q9H3A6 140 aa11.77□□□□□ -0.53
TCOF1-202ENST00000377797 F11RQ9Y624 299 aaKnown RBP11.77□□□□□ -0.53
TCOF1-202ENST00000377797 PGPEP1LA6NFU8 196 aa11.77□□□□□ -0.53
TCOF1-202ENST00000377797 A0A1W2PPI3 338 aa11.76□□□□□ -0.53
TCOF1-202ENST00000377797 M0R2Z0 102 aa11.76□□□□□ -0.53
TCOF1-202ENST00000377797 HLA-DQA1P01909 254 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms