RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 LIPFP07098 398 aa9.92□□□□□ -0.82
VRK3-202ENST00000377011 GZMBP10144 247 aa9.92□□□□□ -0.82
VRK3-202ENST00000377011 DLX6P56179 175 aa9.92□□□□□ -0.82
VRK3-202ENST00000377011 FOXL1Q12952 345 aa9.92□□□□□ -0.82
VRK3-202ENST00000377011 RAB31Q13636 194 aa9.92□□□□□ -0.82
VRK3-202ENST00000377011 UTF1Q5T230 341 aa9.92□□□□□ -0.82
VRK3-202ENST00000377011 GATAD1Q8WUU5 269 aa9.92□□□□□ -0.82
VRK3-202ENST00000377011 AJUBAQ96IF1 538 aa9.92□□□□□ -0.82
VRK3-202ENST00000377011 C2orf88Q9BSF0 95 aa9.92□□□□□ -0.82
VRK3-202ENST00000377011 PXMP4Q9Y6I8 212 aa9.92□□□□□ -0.82
VRK3-202ENST00000377011 CMYA5Q8N3K9 4069 aa9.91□□□□□ -0.82
VRK3-202ENST00000377011 KBTBD11-OT1A0A1B0GTJ5 212 aa9.91□□□□□ -0.82
VRK3-202ENST00000377011 HOXA3O43365 443 aaPredicted RBP9.91□□□□□ -0.82
VRK3-202ENST00000377011 NPPCP23582 126 aa9.91□□□□□ -0.82
VRK3-202ENST00000377011 HSPE1P61604 102 aaKnown RBP9.91□□□□□ -0.82
VRK3-202ENST00000377011 GNB1P62873 340 aa9.91□□□□□ -0.82
VRK3-202ENST00000377011 MGST2Q99735 147 aa9.91□□□□□ -0.82
VRK3-202ENST00000377011 TMEM14BQ9NUH8 114 aa9.91□□□□□ -0.82
VRK3-202ENST00000377011 LY96Q9Y6Y9 160 aa9.91□□□□□ -0.82
VRK3-202ENST00000377011 NBEAL1Q6ZS30 2694 aa9.91□□□□□ -0.82
VRK3-202ENST00000377011 A8MWP6 167 aa9.9□□□□□ -0.82
VRK3-202ENST00000377011 RRHO14718 337 aa9.9□□□□□ -0.82
VRK3-202ENST00000377011 RPL29P47914 159 aaKnown RBP9.9□□□□□ -0.82
VRK3-202ENST00000377011 EDDM3BP56851 147 aa9.9□□□□□ -0.82
VRK3-202ENST00000377011 RPL31P62899 125 aaKnown RBP9.9□□□□□ -0.82
VRK3-202ENST00000377011 C17orf58Q2M2W7 97 aa9.9□□□□□ -0.82
VRK3-202ENST00000377011 SPINK9Q5DT21 86 aa9.9□□□□□ -0.82
VRK3-202ENST00000377011 LDLRAD2Q5SZI1 272 aa9.9□□□□□ -0.82
VRK3-202ENST00000377011 TMEM144Q7Z5S9 345 aa9.9□□□□□ -0.82
VRK3-202ENST00000377011 SPATA3Q8NHX4 192 aa9.9□□□□□ -0.82
VRK3-202ENST00000377011 ZNF257Q9Y2Q1 563 aa9.9□□□□□ -0.82
VRK3-202ENST00000377011 FBN3Q75N90 2809 aa9.9□□□□□ -0.82
VRK3-202ENST00000377011 TRGV10A0A0A0MS01 117 aa9.9□□□□□ -0.83
VRK3-202ENST00000377011 A0A1W2PPQ1 181 aa9.9□□□□□ -0.83
VRK3-202ENST00000377011 SLC31A2O15432 143 aa9.9□□□□□ -0.83
VRK3-202ENST00000377011 MMP23AO75900 390 aa9.9□□□□□ -0.83
VRK3-202ENST00000377011 NPY1RP25929 384 aa9.9□□□□□ -0.83
VRK3-202ENST00000377011 LINC00205P59089 165 aa9.9□□□□□ -0.83
VRK3-202ENST00000377011 TAS2R60P59551 318 aa9.9□□□□□ -0.83
VRK3-202ENST00000377011 RAB4BP61018 213 aa9.9□□□□□ -0.83
VRK3-202ENST00000377011 RHOBP62745 196 aa9.9□□□□□ -0.83
VRK3-202ENST00000377011 LTC4SQ16873 150 aa9.9□□□□□ -0.83
VRK3-202ENST00000377011 IQCJQ1A5X6 159 aa9.9□□□□□ -0.83
VRK3-202ENST00000377011 RPL39P5Q59GN2 51 aa9.9□□□□□ -0.83
VRK3-202ENST00000377011 TEPPQ6URK8 271 aa9.9□□□□□ -0.83
VRK3-202ENST00000377011 NECAP1Q8NC96 275 aa9.9□□□□□ -0.83
VRK3-202ENST00000377011 ZNF439Q8NDP4 499 aa9.9□□□□□ -0.83
VRK3-202ENST00000377011 SLC24A4Q8NFF2 622 aa9.9□□□□□ -0.83
VRK3-202ENST00000377011 C11orf52Q96A22 123 aa9.9□□□□□ -0.83
VRK3-202ENST00000377011 ENY2Q9NPA8 101 aa9.9□□□□□ -0.83
VRK3-202ENST00000377011 PRNDQ9UKY0 176 aa9.9□□□□□ -0.83
VRK3-202ENST00000377011 IL6RP08887 468 aaPredicted RBP9.89□□□□□ -0.83
VRK3-202ENST00000377011 ARL14EPLP0DKL9 152 aa9.89□□□□□ -0.83
VRK3-202ENST00000377011 AREGP15514 252 aa9.89□□□□□ -0.83
VRK3-202ENST00000377011 PRTN3P24158 256 aa9.89□□□□□ -0.83
VRK3-202ENST00000377011 ATP5G3P48201 142 aa9.89□□□□□ -0.83
VRK3-202ENST00000377011 CNN1P51911 297 aaKnown RBP9.89□□□□□ -0.83
VRK3-202ENST00000377011 ZNF134P52741 427 aa9.89□□□□□ -0.83
VRK3-202ENST00000377011 RPS16P62249 146 aaKnown RBP9.89□□□□□ -0.83
VRK3-202ENST00000377011 CST9LP1Q5W188 147 aa9.89□□□□□ -0.83
VRK3-202ENST00000377011 Q6YL49 198 aa9.89□□□□□ -0.83
VRK3-202ENST00000377011 TEX29Q8N6K0 151 aa9.89□□□□□ -0.83
VRK3-202ENST00000377011 KIR3DL3Q8N743 410 aa9.89□□□□□ -0.83
VRK3-202ENST00000377011 NDUFAF3Q9BU61 184 aa9.89□□□□□ -0.83
VRK3-202ENST00000377011 ELOVL1Q9BW60 279 aa9.89□□□□□ -0.83
VRK3-202ENST00000377011 VWFP04275 2813 aa9.88□□□□□ -0.83
VRK3-202ENST00000377011 C9JCJ5 164 aa9.88□□□□□ -0.83
VRK3-202ENST00000377011 NDUFB4O95168 129 aa9.88□□□□□ -0.83
VRK3-202ENST00000377011 IGHV4-59P01825 116 aa9.88□□□□□ -0.83
VRK3-202ENST00000377011 CT45A1Q5HYN5 189 aa9.88□□□□□ -0.83
VRK3-202ENST00000377011 OR4A47Q6IF82 309 aa9.88□□□□□ -0.83
VRK3-202ENST00000377011 DYNAPQ8N1N2 210 aa9.88□□□□□ -0.83
VRK3-202ENST00000377011 CT45A3Q8NHU0 189 aa9.88□□□□□ -0.83
VRK3-202ENST00000377011 TMEM37Q8WXS4 190 aa9.88□□□□□ -0.83
VRK3-202ENST00000377011 RHOVQ96L33 236 aa9.88□□□□□ -0.83
VRK3-202ENST00000377011 IDI2-AS1Q9NZ38 188 aa9.88□□□□□ -0.83
VRK3-202ENST00000377011 FUT9Q9Y231 359 aa9.88□□□□□ -0.83
VRK3-202ENST00000377011 SAA2-SAA4A0A096LPE2 208 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 SAA2P0DJI9 122 aaPredicted RBP9.87□□□□□ -0.83
VRK3-202ENST00000377011 COX7A1P24310 79 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 IL3RAP26951 378 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 GCHFRP30047 84 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 SAA4P35542 130 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 RPL15P61313 204 aaKnown RBP9.87□□□□□ -0.83
VRK3-202ENST00000377011 GCSAMLQ5JQS6 135 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 MIC13Q5XKP0 118 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 LHFPL4Q7Z7J7 247 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 ZNF664Q8N3J9 261 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 GBGT1Q8N5D6 347 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 SFRP2Q96HF1 295 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 SLC35E1Q96K37 410 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 UHRF2Q96PU4 802 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 PRO1933Q9H354 126 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 FKBP11Q9NYL4 201 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 TRAV3A0A0B4J244 114 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 M0R1W7 72 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 NPFFO15130 113 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 YPEL3P61236 119 aaPredicted RBP9.87□□□□□ -0.83
VRK3-202ENST00000377011 PRR20EP86478 221 aa9.87□□□□□ -0.83
VRK3-202ENST00000377011 PRR20CP86479 221 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms