RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 MYOD1P15172 320 aa16.74■□□□□ 0.27
TMEFF1-201ENST00000374879 CYB561P49447 251 aa16.74■□□□□ 0.27
TMEFF1-201ENST00000374879 UBE2L3P68036 154 aaKnown RBP16.74■□□□□ 0.27
TMEFF1-201ENST00000374879 RTL8BQ17RB0 113 aa16.74■□□□□ 0.27
TMEFF1-201ENST00000374879 C22orf46C9J442 243 aa16.74■□□□□ 0.27
TMEFF1-201ENST00000374879 PGLYRP4Q96LB8 373 aa16.74■□□□□ 0.27
TMEFF1-201ENST00000374879 DCTN5Q9BTE1 182 aa16.74■□□□□ 0.27
TMEFF1-201ENST00000374879 TSSC4Q9Y5U2 329 aaPredicted RBP16.74■□□□□ 0.27
TMEFF1-201ENST00000374879 ZNF207O43670 478 aaKnown RBP16.73■□□□□ 0.27
TMEFF1-201ENST00000374879 HINT2Q9BX68 163 aa16.73■□□□□ 0.27
TMEFF1-201ENST00000374879 PEX7O00628 323 aa16.73■□□□□ 0.27
TMEFF1-201ENST00000374879 FAM87AP0C7U9 286 aa16.73■□□□□ 0.27
TMEFF1-201ENST00000374879 PLP2Q04941 152 aa16.73■□□□□ 0.27
TMEFF1-201ENST00000374879 RPL39P5Q59GN2 51 aa16.73■□□□□ 0.27
TMEFF1-201ENST00000374879 GTSF1Q8WW33 167 aa16.73■□□□□ 0.27
TMEFF1-201ENST00000374879 IGHV3-13P01766 116 aa16.72■□□□□ 0.27
TMEFF1-201ENST00000374879 IGHV3-7P01780 117 aa16.72■□□□□ 0.27
TMEFF1-201ENST00000374879 SRYQ05066 204 aa16.72■□□□□ 0.27
TMEFF1-201ENST00000374879 FAM167A-AS1Q96KT0 104 aa16.72■□□□□ 0.27
TMEFF1-201ENST00000374879 SLC25A2Q9BXI2 301 aa16.72■□□□□ 0.27
TMEFF1-201ENST00000374879 LOXL2Q9Y4K0 774 aa16.72■□□□□ 0.27
TMEFF1-201ENST00000374879 GAGE12HA6NDE8 117 aa16.72■□□□□ 0.27
TMEFF1-201ENST00000374879 PYYP10082 97 aa16.72■□□□□ 0.27
TMEFF1-201ENST00000374879 CEACAM3P40198 252 aa16.72■□□□□ 0.27
TMEFF1-201ENST00000374879 MLANAQ16655 118 aa16.72■□□□□ 0.27
TMEFF1-201ENST00000374879 SPINK14Q6IE38 97 aa16.72■□□□□ 0.27
TMEFF1-201ENST00000374879 ZNF257Q9Y2Q1 563 aa16.72■□□□□ 0.27
TMEFF1-201ENST00000374879 ASPMQ8IZT6 3477 aa16.72■□□□□ 0.27
TMEFF1-201ENST00000374879 LINC00322Q6ZN03 302 aaPredicted RBP16.71■□□□□ 0.27
TMEFF1-201ENST00000374879 ZNF788Q6ZQV5 615 aa16.71■□□□□ 0.27
TMEFF1-201ENST00000374879 ZNF329Q86UD4 541 aa16.71■□□□□ 0.27
TMEFF1-201ENST00000374879 C15orf61A6NNL5 157 aa16.71■□□□□ 0.27
TMEFF1-201ENST00000374879 FABP2P12104 132 aa16.71■□□□□ 0.27
TMEFF1-201ENST00000374879 GNG5P63218 68 aa16.71■□□□□ 0.27
TMEFF1-201ENST00000374879 CD300EQ496F6 205 aaPredicted RBP16.71■□□□□ 0.27
TMEFF1-201ENST00000374879 TUSC5Q8IXB3 177 aa16.71■□□□□ 0.27
TMEFF1-201ENST00000374879 NEU4Q8WWR8 484 aaPredicted RBP16.71■□□□□ 0.27
TMEFF1-201ENST00000374879 NDFIP1Q9BT67 221 aa16.71■□□□□ 0.27
TMEFF1-201ENST00000374879 ZNF747Q9BV97 191 aa16.71■□□□□ 0.27
TMEFF1-201ENST00000374879 ENY2Q9NPA8 101 aa16.71■□□□□ 0.27
TMEFF1-201ENST00000374879 TRAV26-1A0A087WT03 109 aa16.7■□□□□ 0.26
TMEFF1-201ENST00000374879 TMEM189A5PLL7 270 aa16.7■□□□□ 0.26
TMEFF1-201ENST00000374879 CKS1BP61024 79 aa16.7■□□□□ 0.26
TMEFF1-201ENST00000374879 CXorf67Q86X51 503 aaPredicted RBP16.7■□□□□ 0.26
TMEFF1-201ENST00000374879 OR9G1Q8NH87 305 aa16.7■□□□□ 0.26
TMEFF1-201ENST00000374879 SPAARA0A1B0GVQ0 90 aa16.7■□□□□ 0.26
TMEFF1-201ENST00000374879 ALKBH6Q3KRA9 238 aa16.7■□□□□ 0.26
TMEFF1-201ENST00000374879 CCDC144NLQ6NUI1 221 aa16.7■□□□□ 0.26
TMEFF1-201ENST00000374879 ADAMTSL5Q6ZMM2 481 aa16.7■□□□□ 0.26
TMEFF1-201ENST00000374879 ZNF826PQ6ZT77 177 aa16.7■□□□□ 0.26
TMEFF1-201ENST00000374879 BOD1L2Q8IYS8 172 aa16.7■□□□□ 0.26
TMEFF1-201ENST00000374879 LINC00470Q9BZP3 86 aa16.7■□□□□ 0.26
TMEFF1-201ENST00000374879 METRNQ9UJH8 293 aa16.7■□□□□ 0.26
TMEFF1-201ENST00000374879 NBEAQ8NFP9 2946 aa16.7■□□□□ 0.26
TMEFF1-201ENST00000374879 A1L4Q6 167 aa16.69■□□□□ 0.26
TMEFF1-201ENST00000374879 FBLL1A6NHQ2 334 aaKnown RBP16.69■□□□□ 0.26
TMEFF1-201ENST00000374879 ZNF766Q5HY98 468 aa16.69■□□□□ 0.26
TMEFF1-201ENST00000374879 ADTRPQ96IZ2 230 aa16.69■□□□□ 0.26
TMEFF1-201ENST00000374879 DOCK10Q96BY6 2186 aa16.69■□□□□ 0.26
TMEFF1-201ENST00000374879 MGST3O14880 152 aa16.69■□□□□ 0.26
TMEFF1-201ENST00000374879 HSPE1P61604 102 aaKnown RBP16.69■□□□□ 0.26
TMEFF1-201ENST00000374879 PLGLB1Q02325 96 aa16.69■□□□□ 0.26
TMEFF1-201ENST00000374879 PEAR1Q5VY43 1037 aaPredicted RBP16.69■□□□□ 0.26
TMEFF1-201ENST00000374879 ACP7Q6ZNF0 438 aa16.69■□□□□ 0.26
TMEFF1-201ENST00000374879 S1PR3Q99500 378 aa16.69■□□□□ 0.26
TMEFF1-201ENST00000374879 FNDC10F2Z333 226 aa16.68■□□□□ 0.26
TMEFF1-201ENST00000374879 ADH4P08319 380 aa16.68■□□□□ 0.26
TMEFF1-201ENST00000374879 CRYBA4P53673 196 aa16.68■□□□□ 0.26
TMEFF1-201ENST00000374879 SAMD5Q5TGI4 173 aa16.68■□□□□ 0.26
TMEFF1-201ENST00000374879 C6orf15Q6UXA7 325 aaPredicted RBP16.68■□□□□ 0.26
TMEFF1-201ENST00000374879 PIP4P2Q8N4L2 257 aa16.68■□□□□ 0.26
TMEFF1-201ENST00000374879 RPP21Q9H633 154 aaKnown RBP16.68■□□□□ 0.26
TMEFF1-201ENST00000374879 FTH1P19P0C7X4 201 aa16.68■□□□□ 0.26
TMEFF1-201ENST00000374879 PCSK5Q92824 1860 aa16.68■□□□□ 0.26
TMEFF1-201ENST00000374879 C19orf24Q9BVV8 132 aa16.68■□□□□ 0.26
TMEFF1-201ENST00000374879 BOKQ9UMX3 212 aaPredicted RBP16.68■□□□□ 0.26
TMEFF1-201ENST00000374879 CHEK1O14757 476 aa16.67■□□□□ 0.26
TMEFF1-201ENST00000374879 CELA3AP09093 270 aa16.67■□□□□ 0.26
TMEFF1-201ENST00000374879 ABHD17AQ96GS6 310 aa16.67■□□□□ 0.26
TMEFF1-201ENST00000374879 PRO3102Q9H379 93 aa16.67■□□□□ 0.26
TMEFF1-201ENST00000374879 LAMTOR5O43504 91 aa16.67■□□□□ 0.26
TMEFF1-201ENST00000374879 INSIG2Q9Y5U4 225 aa16.67■□□□□ 0.26
TMEFF1-201ENST00000374879 SMAD7O15105 426 aaKnown RBP16.66■□□□□ 0.26
TMEFF1-201ENST00000374879 IGKV3D-15A0A087WSY6 115 aa16.66■□□□□ 0.26
TMEFF1-201ENST00000374879 A8MWL6 223 aa16.66■□□□□ 0.26
TMEFF1-201ENST00000374879 C15orf65H3BRN8 121 aa16.66■□□□□ 0.26
TMEFF1-201ENST00000374879 APOHP02749 345 aaPredicted RBP16.66■□□□□ 0.26
TMEFF1-201ENST00000374879 FCGR2BP31994 310 aaPredicted RBP16.66■□□□□ 0.26
TMEFF1-201ENST00000374879 TM4SF20Q53R12 229 aa16.66■□□□□ 0.26
TMEFF1-201ENST00000374879 C1orf229Q6ZS94 237 aaPredicted RBP16.66■□□□□ 0.26
TMEFF1-201ENST00000374879 TMEM14BQ9NUH8 114 aa16.66■□□□□ 0.26
TMEFF1-201ENST00000374879 SPINT2O43291 252 aa16.66■□□□□ 0.26
TMEFF1-201ENST00000374879 GNG12Q9UBI6 72 aa16.66■□□□□ 0.26
TMEFF1-201ENST00000374879 HES7Q9BYE0 225 aa16.65■□□□□ 0.26
TMEFF1-201ENST00000374879 FOXA2Q9Y261 457 aaPredicted RBP16.65■□□□□ 0.26
TMEFF1-201ENST00000374879 ZNF134P52741 427 aa16.65■□□□□ 0.26
TMEFF1-201ENST00000374879 LPAL2Q16609 132 aa16.65■□□□□ 0.26
TMEFF1-201ENST00000374879 FA2HQ7L5A8 372 aa16.65■□□□□ 0.26
TMEFF1-201ENST00000374879 DPF1Q92782 380 aa16.65■□□□□ 0.26
TMEFF1-201ENST00000374879 PAXXQ9BUH6 204 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms