RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 PITPNC1Q9UKF7 332 aa12.46□□□□□ -0.41
CCDC40-202ENST00000374876 TLN2Q9Y4G6 2542 aa12.46□□□□□ -0.41
CCDC40-202ENST00000374876 ENSAO43768 121 aaKnown RBP12.45□□□□□ -0.42
CCDC40-202ENST00000374876 SUB1P53999 127 aaKnown RBP eCLIP12.45□□□□□ -0.42
CCDC40-202ENST00000374876 TAS2R45P59539 299 aa12.45□□□□□ -0.42
CCDC40-202ENST00000374876 OR2T6Q8NHC8 308 aa12.45□□□□□ -0.42
CCDC40-202ENST00000374876 GSN-AS1Q9NRJ2 163 aa12.45□□□□□ -0.42
CCDC40-202ENST00000374876 ARL2-SNX15V9GYD0 113 aa12.45□□□□□ -0.42
CCDC40-202ENST00000374876 ABCA2Q9BZC7 2435 aa12.45□□□□□ -0.42
CCDC40-202ENST00000374876 ARHGAP32A7KAX9 2087 aa12.45□□□□□ -0.42
CCDC40-202ENST00000374876 SLC25A17O43808 307 aa12.45□□□□□ -0.42
CCDC40-202ENST00000374876 OR7C2O60412 319 aa12.45□□□□□ -0.42
CCDC40-202ENST00000374876 LCN2P80188 198 aa12.45□□□□□ -0.42
CCDC40-202ENST00000374876 WT1-ASQ06250 92 aa12.45□□□□□ -0.42
CCDC40-202ENST00000374876 C10orf55Q5SWW7 151 aa12.45□□□□□ -0.42
CCDC40-202ENST00000374876 PQLC2Q6ZP29 291 aa12.45□□□□□ -0.42
CCDC40-202ENST00000374876 PNKDQ8N490 385 aa12.45□□□□□ -0.42
CCDC40-202ENST00000374876 C11orf42Q8N5U0 333 aa12.45□□□□□ -0.42
CCDC40-202ENST00000374876 OR10D4PQ8NGN7 298 aa12.45□□□□□ -0.42
CCDC40-202ENST00000374876 RNASEH2CQ8TDP1 164 aaKnown RBP12.45□□□□□ -0.42
CCDC40-202ENST00000374876 IMMP2LQ96T52 175 aa12.45□□□□□ -0.42
CCDC40-202ENST00000374876 OR51M1Q9H341 326 aa12.45□□□□□ -0.42
CCDC40-202ENST00000374876 MIOXQ9UGB7 285 aa12.45□□□□□ -0.42
CCDC40-202ENST00000374876 TGFAP01135 160 aa12.44□□□□□ -0.42
CCDC40-202ENST00000374876 TYMSP04818 313 aa12.44□□□□□ -0.42
CCDC40-202ENST00000374876 OR5G3P0C626 314 aa12.44□□□□□ -0.42
CCDC40-202ENST00000374876 AREGP15514 252 aa12.44□□□□□ -0.42
CCDC40-202ENST00000374876 HNF1AP20823 631 aa12.44□□□□□ -0.42
CCDC40-202ENST00000374876 LGALS7P47929 136 aa12.44□□□□□ -0.42
CCDC40-202ENST00000374876 CYB5R2Q6BCY4 276 aa12.44□□□□□ -0.42
CCDC40-202ENST00000374876 OCC1Q8TAD7 63 aa12.44□□□□□ -0.42
CCDC40-202ENST00000374876 C11orf52Q96A22 123 aa12.44□□□□□ -0.42
CCDC40-202ENST00000374876 BTF3L4Q96K17 158 aa12.44□□□□□ -0.42
CCDC40-202ENST00000374876 CGB1A6NKQ9 187 aa12.44□□□□□ -0.42
CCDC40-202ENST00000374876 LURAP1LQ8IV03 231 aa12.44□□□□□ -0.42
CCDC40-202ENST00000374876 TNFRSF14Q92956 283 aa12.44□□□□□ -0.42
CCDC40-202ENST00000374876 MALRD1Q5VYJ5 2156 aa12.43□□□□□ -0.42
CCDC40-202ENST00000374876 IGHV3-72A0A0B4J1Y9 119 aa12.43□□□□□ -0.42
CCDC40-202ENST00000374876 FABP4P15090 132 aa12.43□□□□□ -0.42
CCDC40-202ENST00000374876 PRRX1P54821 245 aa12.43□□□□□ -0.42
CCDC40-202ENST00000374876 FOXL1Q12952 345 aa12.43□□□□□ -0.42
CCDC40-202ENST00000374876 PYY3Q5JQD4 70 aa12.43□□□□□ -0.42
CCDC40-202ENST00000374876 ACTL10Q5JWF8 245 aa12.43□□□□□ -0.42
CCDC40-202ENST00000374876 RITA1Q96K30 269 aa12.43□□□□□ -0.42
CCDC40-202ENST00000374876 IGHV2-26A0A0B4J1V2 119 aa12.42□□□□□ -0.42
CCDC40-202ENST00000374876 A0A0U1RQK1 487 aa12.42□□□□□ -0.42
CCDC40-202ENST00000374876 ZNF320A2RRD8 509 aa12.42□□□□□ -0.42
CCDC40-202ENST00000374876 C9JCJ5 164 aa12.42□□□□□ -0.42
CCDC40-202ENST00000374876 FSTL3O95633 263 aa12.42□□□□□ -0.42
CCDC40-202ENST00000374876 ZFP36P26651 326 aaKnown RBP12.42□□□□□ -0.42
CCDC40-202ENST00000374876 TEX38Q6PEX7 206 aa12.42□□□□□ -0.42
CCDC40-202ENST00000374876 TMEM183AQ8IXX5 376 aa12.42□□□□□ -0.42
CCDC40-202ENST00000374876 LINC01356Q8N9X3 169 aa12.42□□□□□ -0.42
CCDC40-202ENST00000374876 OR10G8Q8NGN5 311 aa12.42□□□□□ -0.42
CCDC40-202ENST00000374876 SGMS2Q8NHU3 365 aa12.42□□□□□ -0.42
CCDC40-202ENST00000374876 TPSG1Q9NRR2 321 aa12.42□□□□□ -0.42
CCDC40-202ENST00000374876 CD5LO43866 347 aa12.42□□□□□ -0.42
CCDC40-202ENST00000374876 C8orf88P0DMB2 117 aa12.42□□□□□ -0.42
CCDC40-202ENST00000374876 MRPL41Q8IXM3 137 aaKnown RBP12.42□□□□□ -0.42
CCDC40-202ENST00000374876 TMEM37Q8WXS4 190 aa12.42□□□□□ -0.42
CCDC40-202ENST00000374876 ZNF503Q96F45 646 aa12.42□□□□□ -0.42
CCDC40-202ENST00000374876 RNF2Q99496 336 aa12.42□□□□□ -0.42
CCDC40-202ENST00000374876 SLC25A33Q9BSK2 321 aa12.42□□□□□ -0.42
CCDC40-202ENST00000374876 MRPL32Q9BYC8 188 aaKnown RBP12.42□□□□□ -0.42
CCDC40-202ENST00000374876 YAE1D1Q9NRH1 226 aa12.42□□□□□ -0.42
CCDC40-202ENST00000374876 A0A1W2PPI3 338 aa12.41□□□□□ -0.42
CCDC40-202ENST00000374876 XKRY2A2RUG3 117 aa12.41□□□□□ -0.42
CCDC40-202ENST00000374876 B4DSR2 109 aa12.41□□□□□ -0.42
CCDC40-202ENST00000374876 OR10J4P0C629 311 aa12.41□□□□□ -0.42
CCDC40-202ENST00000374876 NPIPB3Q92617 1050 aa12.41□□□□□ -0.42
CCDC40-202ENST00000374876 FNDC4Q9H6D8 234 aaPredicted RBP12.41□□□□□ -0.42
CCDC40-202ENST00000374876 DNAJC4Q9NNZ3 241 aa12.41□□□□□ -0.42
CCDC40-202ENST00000374876 LY96Q9Y6Y9 160 aa12.41□□□□□ -0.42
CCDC40-202ENST00000374876 REG1AP05451 166 aa12.4□□□□□ -0.42
CCDC40-202ENST00000374876 CRYBB3P26998 211 aa12.4□□□□□ -0.42
CCDC40-202ENST00000374876 DLX1P56177 255 aa12.4□□□□□ -0.42
CCDC40-202ENST00000374876 ZNF841Q6ZN19 808 aa12.4□□□□□ -0.42
CCDC40-202ENST00000374876 TEX45Q8NA69 505 aa12.4□□□□□ -0.42
CCDC40-202ENST00000374876 OR8B3Q8NGG8 313 aa12.4□□□□□ -0.42
CCDC40-202ENST00000374876 OR1P1Q8NH06 330 aa12.4□□□□□ -0.42
CCDC40-202ENST00000374876 OR8B2Q96RD0 313 aa12.4□□□□□ -0.42
CCDC40-202ENST00000374876 CLEC7AQ9BXN2 247 aa12.4□□□□□ -0.42
CCDC40-202ENST00000374876 INSIG2Q9Y5U4 225 aa12.4□□□□□ -0.42
CCDC40-202ENST00000374876 MTORP42345 2549 aa12.4□□□□□ -0.42
CCDC40-202ENST00000374876 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.4□□□□□ -0.424e-7■■■■□ 19.8
CCDC40-202ENST00000374876 PPIAL4CA0A0B4J2A2 164 aa12.4□□□□□ -0.42
CCDC40-202ENST00000374876 HELTA6NFD8 242 aa12.4□□□□□ -0.42
CCDC40-202ENST00000374876 K7EN84 100 aa12.4□□□□□ -0.42
CCDC40-202ENST00000374876 COX7A2P2O60397 106 aa12.4□□□□□ -0.42
CCDC40-202ENST00000374876 IGLV1-47P01700 117 aa12.4□□□□□ -0.42
CCDC40-202ENST00000374876 IGHV3-48P01763 117 aa12.4□□□□□ -0.42
CCDC40-202ENST00000374876 PPIAL4GP0DN37 164 aa12.4□□□□□ -0.42
CCDC40-202ENST00000374876 GNG4P50150 75 aa12.4□□□□□ -0.42
CCDC40-202ENST00000374876 SSBP2P81877 361 aaPredicted RBP12.4□□□□□ -0.42
CCDC40-202ENST00000374876 PRB3Q04118 309 aaPredicted RBP12.4□□□□□ -0.42
CCDC40-202ENST00000374876 MMD2Q8IY49 270 aa12.4□□□□□ -0.42
CCDC40-202ENST00000374876 EAF1Q96JC9 268 aaPredicted RBP12.4□□□□□ -0.42
CCDC40-202ENST00000374876 PACRGQ96M98 296 aaPredicted RBP12.4□□□□□ -0.42
CCDC40-202ENST00000374876 PFDN5Q99471 154 aa12.4□□□□□ -0.42
CCDC40-202ENST00000374876 HIST1H2BLQ99880 126 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms