RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 HNRNPCP07910 306 aaKnown RBP eCLIP9.89□□□□□ -0.83
CXCL12-202ENST00000374426 UCP1P25874 307 aa9.89□□□□□ -0.83
CXCL12-202ENST00000374426 RND2P52198 227 aa9.89□□□□□ -0.83
CXCL12-202ENST00000374426 AP2S1P53680 142 aaPredicted RBP9.89□□□□□ -0.83
CXCL12-202ENST00000374426 NCS1P62166 190 aa9.89□□□□□ -0.83
CXCL12-202ENST00000374426 USF2Q15853 346 aaPredicted RBP9.89□□□□□ -0.83
CXCL12-202ENST00000374426 PRSS54Q6PEW0 395 aa9.89□□□□□ -0.83
CXCL12-202ENST00000374426 RRNAD1Q96FB5 475 aaKnown RBP9.89□□□□□ -0.83
CXCL12-202ENST00000374426 NDUFAF3Q9BU61 184 aa9.89□□□□□ -0.83
CXCL12-202ENST00000374426 XCL2Q9UBD3 114 aa9.89□□□□□ -0.83
CXCL12-202ENST00000374426 RPS10-NUDT3A0A1W2PQS6 291 aa9.88□□□□□ -0.83
CXCL12-202ENST00000374426 H3BMM0 161 aa9.88□□□□□ -0.83
CXCL12-202ENST00000374426 M0R2N4 97 aa9.88□□□□□ -0.83
CXCL12-202ENST00000374426 OR10J1P30954 320 aa9.88□□□□□ -0.83
CXCL12-202ENST00000374426 HTR2BP41595 481 aa9.88□□□□□ -0.83
CXCL12-202ENST00000374426 SPCS3P61009 180 aa9.88□□□□□ -0.83
CXCL12-202ENST00000374426 YPEL3P61236 119 aaPredicted RBP9.88□□□□□ -0.83
CXCL12-202ENST00000374426 NUTF2P61970 127 aaKnown RBP9.88□□□□□ -0.83
CXCL12-202ENST00000374426 DHODHQ02127 395 aa9.88□□□□□ -0.83
CXCL12-202ENST00000374426 OR4D10Q8NGI6 311 aa9.88□□□□□ -0.83
CXCL12-202ENST00000374426 OR1S2Q8NGQ3 325 aa9.88□□□□□ -0.83
CXCL12-202ENST00000374426 OR13C8Q8NGS7 320 aa9.88□□□□□ -0.83
CXCL12-202ENST00000374426 OR52I2Q8NH67 350 aa9.88□□□□□ -0.83
CXCL12-202ENST00000374426 Q8WTZ3 238 aa9.88□□□□□ -0.83
CXCL12-202ENST00000374426 C1QTNF4Q9BXJ3 329 aa9.88□□□□□ -0.83
CXCL12-202ENST00000374426 COPZ2Q9P299 210 aa9.88□□□□□ -0.83
CXCL12-202ENST00000374426 IL4P05112 153 aa9.87□□□□□ -0.83
CXCL12-202ENST00000374426 SLC25A4P12235 298 aa9.87□□□□□ -0.83
CXCL12-202ENST00000374426 TBPP20226 339 aa9.87□□□□□ -0.83
CXCL12-202ENST00000374426 VBP1P61758 197 aa9.87□□□□□ -0.83
CXCL12-202ENST00000374426 SNRPD3P62318 126 aaKnown RBP9.87□□□□□ -0.83
CXCL12-202ENST00000374426 C2orf83Q53S99 150 aa9.87□□□□□ -0.83
CXCL12-202ENST00000374426 ZNF705AQ6ZN79 300 aaPredicted RBP9.87□□□□□ -0.83
CXCL12-202ENST00000374426 CCDC71LQ8N9Z2 235 aa9.87□□□□□ -0.83
CXCL12-202ENST00000374426 OR52E5Q8NH55 327 aa9.87□□□□□ -0.83
CXCL12-202ENST00000374426 TERB2Q8NHR7 220 aa9.87□□□□□ -0.83
CXCL12-202ENST00000374426 RNASE11Q8TAA1 199 aaKnown RBP9.87□□□□□ -0.83
CXCL12-202ENST00000374426 ZFAND1Q8TCF1 268 aa9.87□□□□□ -0.83
CXCL12-202ENST00000374426 TMEM170AQ8WVE7 144 aa9.87□□□□□ -0.83
CXCL12-202ENST00000374426 SEPSECSQ9HD40 501 aaKnown RBP9.87□□□□□ -0.83
CXCL12-202ENST00000374426 NRN1Q9NPD7 142 aa9.87□□□□□ -0.83
CXCL12-202ENST00000374426 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.87□□□□□ -0.83
CXCL12-202ENST00000374426 A0A087WXM4 84 aa9.86□□□□□ -0.83
CXCL12-202ENST00000374426 ZNF705FA8MVS1 300 aaPredicted RBP9.86□□□□□ -0.83
CXCL12-202ENST00000374426 BUB3O43684 328 aa9.86□□□□□ -0.83
CXCL12-202ENST00000374426 B3GALNT1O75752 331 aa9.86□□□□□ -0.83
CXCL12-202ENST00000374426 NXPH3O95157 252 aa9.86□□□□□ -0.83
CXCL12-202ENST00000374426 CDS2O95674 445 aa9.86□□□□□ -0.83
CXCL12-202ENST00000374426 ZNF705DP0CH99 300 aaPredicted RBP9.86□□□□□ -0.83
CXCL12-202ENST00000374426 ZNF705BP0CI00 300 aaPredicted RBP9.86□□□□□ -0.83
CXCL12-202ENST00000374426 HLA-DRB4P13762 266 aa9.86□□□□□ -0.83
CXCL12-202ENST00000374426 NPY1RP25929 384 aa9.86□□□□□ -0.83
CXCL12-202ENST00000374426 LGALS9BQ3B8N2 356 aa9.86□□□□□ -0.83
CXCL12-202ENST00000374426 FAM219AQ8IW50 185 aa9.86□□□□□ -0.83
CXCL12-202ENST00000374426 LHFPL5Q8TAF8 219 aa9.86□□□□□ -0.83
CXCL12-202ENST00000374426 MARCH1Q8TCQ1 289 aa9.86□□□□□ -0.83
CXCL12-202ENST00000374426 RNASEH2CQ8TDP1 164 aaKnown RBP9.86□□□□□ -0.83
CXCL12-202ENST00000374426 GLYATL2Q8WU03 294 aa9.86□□□□□ -0.83
CXCL12-202ENST00000374426 NEU1Q99519 415 aa9.86□□□□□ -0.83
CXCL12-202ENST00000374426 FUNDC2Q9BWH2 189 aa9.86□□□□□ -0.83
CXCL12-202ENST00000374426 TMEM222Q9H0R3 208 aa9.86□□□□□ -0.83
CXCL12-202ENST00000374426 VCX3AQ9NNX9 186 aa9.86□□□□□ -0.83
CXCL12-202ENST00000374426 HEYLQ9NQ87 328 aaPredicted RBP9.86□□□□□ -0.83
CXCL12-202ENST00000374426 MTFP1Q9UDX5 166 aa9.86□□□□□ -0.83
CXCL12-202ENST00000374426 HLA-DRB4X5D2U9 266 aa9.86□□□□□ -0.83
CXCL12-202ENST00000374426 HSPG2P98160 4391 aa9.85□□□□□ -0.83
CXCL12-202ENST00000374426 FAM25AB3EWG3 89 aa9.85□□□□□ -0.83
CXCL12-202ENST00000374426 FAM25CB3EWG5 89 aa9.85□□□□□ -0.83
CXCL12-202ENST00000374426 FAM25GB3EWG6 89 aa9.85□□□□□ -0.83
CXCL12-202ENST00000374426 CD74P04233 296 aa9.85□□□□□ -0.83
CXCL12-202ENST00000374426 OR5AC1P0C628 307 aa9.85□□□□□ -0.83
CXCL12-202ENST00000374426 SCGB2B2Q4G0G5 96 aa9.85□□□□□ -0.83
CXCL12-202ENST00000374426 GDF5OSQ5U4N7 250 aa9.85□□□□□ -0.83
CXCL12-202ENST00000374426 SIGLEC15Q6ZMC9 328 aa9.85□□□□□ -0.83
CXCL12-202ENST00000374426 SLC24A4Q8NFF2 622 aa9.85□□□□□ -0.83
CXCL12-202ENST00000374426 NPIPB3Q92617 1050 aa9.85□□□□□ -0.83
CXCL12-202ENST00000374426 ABHD1Q96SE0 405 aa9.85□□□□□ -0.83
CXCL12-202ENST00000374426 CACNG5Q9UF02 275 aa9.85□□□□□ -0.83
CXCL12-202ENST00000374426 TOMM40O96008 361 aa9.84□□□□□ -0.83
CXCL12-202ENST00000374426 SPART-AS1P0CW21 52 aa9.84□□□□□ -0.83
CXCL12-202ENST00000374426 RD3LP0DJH9 198 aa9.84□□□□□ -0.83
CXCL12-202ENST00000374426 NKX2-1P43699 371 aaPredicted RBP9.84□□□□□ -0.83
CXCL12-202ENST00000374426 RORCP51449 518 aa9.84□□□□□ -0.83
CXCL12-202ENST00000374426 EMP1P54849 157 aa9.84□□□□□ -0.83
CXCL12-202ENST00000374426 DEFB1P60022 68 aa9.84□□□□□ -0.83
CXCL12-202ENST00000374426 RBPMSQ93062 196 aaKnown RBP9.84□□□□□ -0.83
CXCL12-202ENST00000374426 GPR146Q96CH1 333 aa9.84□□□□□ -0.83
CXCL12-202ENST00000374426 RTBDNQ9BSG5 229 aaPredicted RBP9.84□□□□□ -0.83
CXCL12-202ENST00000374426 TEX13DA0A0J9YY54 714 aaPredicted RBP9.83□□□□□ -0.84
CXCL12-202ENST00000374426 TMEM189A5PLL7 270 aa9.83□□□□□ -0.84
CXCL12-202ENST00000374426 CEBPZOSA8MTT3 80 aa9.83□□□□□ -0.84
CXCL12-202ENST00000374426 GSTZ1O43708 216 aaPredicted RBP9.83□□□□□ -0.84
CXCL12-202ENST00000374426 RAB3DO95716 219 aa9.83□□□□□ -0.84
CXCL12-202ENST00000374426 PSG1P11464 419 aa9.83□□□□□ -0.84
CXCL12-202ENST00000374426 MEF2DQ14814 521 aa9.83□□□□□ -0.84
CXCL12-202ENST00000374426 Q6ZR54 194 aa9.83□□□□□ -0.84
CXCL12-202ENST00000374426 SELENOHQ8IZQ5 122 aaKnown RBP9.83□□□□□ -0.84
CXCL12-202ENST00000374426 TMEM229BQ8NBD8 167 aa9.83□□□□□ -0.84
CXCL12-202ENST00000374426 ACY3Q96HD9 319 aa9.83□□□□□ -0.84
CXCL12-202ENST00000374426 NAA60Q9H7X0 242 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms