RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 SPRY2O43597 315 aa13.22□□□□□ -0.29
TRAPPC3-202ENST00000373162 SLC25A4P12235 298 aa13.22□□□□□ -0.29
TRAPPC3-202ENST00000373162 ATF4P18848 351 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC3-202ENST00000373162 NPY1RP25929 384 aa13.22□□□□□ -0.29
TRAPPC3-202ENST00000373162 CCR6P51684 374 aa13.22□□□□□ -0.29
TRAPPC3-202ENST00000373162 LINC00299Q6ZSB3 139 aa13.22□□□□□ -0.29
TRAPPC3-202ENST00000373162 LRTM2Q8N967 370 aa13.22□□□□□ -0.29
TRAPPC3-202ENST00000373162 MCUBQ9NWR8 336 aa13.22□□□□□ -0.29
TRAPPC3-202ENST00000373162 CACFD1Q9UGQ2 172 aa13.22□□□□□ -0.29
TRAPPC3-202ENST00000373162 ALMS1Q8TCU4 4167 aa13.21□□□□□ -0.29
TRAPPC3-202ENST00000373162 TRAV30A0A087WSZ9 112 aa13.21□□□□□ -0.29
TRAPPC3-202ENST00000373162 IGHV3-66A0A0C4DH42 116 aa13.21□□□□□ -0.29
TRAPPC3-202ENST00000373162 RPS10-NUDT3A0A1W2PQS6 291 aa13.21□□□□□ -0.29
TRAPPC3-202ENST00000373162 AKR1C4P17516 323 aa13.21□□□□□ -0.29
TRAPPC3-202ENST00000373162 BMI1P35226 326 aa13.21□□□□□ -0.29
TRAPPC3-202ENST00000373162 TFPI2P48307 235 aa13.21□□□□□ -0.29
TRAPPC3-202ENST00000373162 RND2P52198 227 aa13.21□□□□□ -0.29
TRAPPC3-202ENST00000373162 CMC4P56277 68 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC3-202ENST00000373162 YPEL3P61236 119 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC3-202ENST00000373162 SMCO1Q147U7 214 aa13.21□□□□□ -0.29
TRAPPC3-202ENST00000373162 PYDC2Q56P42 97 aa13.21□□□□□ -0.29
TRAPPC3-202ENST00000373162 GBGT1Q8N5D6 347 aa13.21□□□□□ -0.29
TRAPPC3-202ENST00000373162 OR1S2Q8NGQ3 325 aa13.21□□□□□ -0.29
TRAPPC3-202ENST00000373162 IGKV3-7A0A075B6H7 116 aa13.2□□□□□ -0.3
TRAPPC3-202ENST00000373162 DUXBA0A1W2PPF3 345 aa13.2□□□□□ -0.3
TRAPPC3-202ENST00000373162 CEBPZOSA8MTT3 80 aa13.2□□□□□ -0.3
TRAPPC3-202ENST00000373162 K7EQG2 157 aa13.2□□□□□ -0.3
TRAPPC3-202ENST00000373162 RPL35AP18077 110 aaKnown RBP13.2□□□□□ -0.3
TRAPPC3-202ENST00000373162 SRPXP78539 464 aa13.2□□□□□ -0.3
TRAPPC3-202ENST00000373162 TMEM128Q5BJH2 165 aa13.2□□□□□ -0.3
TRAPPC3-202ENST00000373162 LYG2Q86SG7 212 aa13.2□□□□□ -0.3
TRAPPC3-202ENST00000373162 LGI3Q8N145 548 aa13.2□□□□□ -0.3
TRAPPC3-202ENST00000373162 DCANP1Q8TF63 244 aa13.2□□□□□ -0.3
TRAPPC3-202ENST00000373162 SRRQ9GZT4 340 aa13.2□□□□□ -0.3
TRAPPC3-202ENST00000373162 RBKSQ9H477 322 aa13.2□□□□□ -0.3
TRAPPC3-202ENST00000373162 A0A0J9YWU9 116 aa13.19□□□□□ -0.3
TRAPPC3-202ENST00000373162 NPPCP23582 126 aa13.19□□□□□ -0.3
TRAPPC3-202ENST00000373162 FAUP35544 74 aaKnown RBP13.19□□□□□ -0.3
TRAPPC3-202ENST00000373162 P2RY1P47900 373 aa13.19□□□□□ -0.3
TRAPPC3-202ENST00000373162 AP3S2P59780 193 aa13.19□□□□□ -0.3
TRAPPC3-202ENST00000373162 RBMS2Q15434 407 aaKnown RBP13.19□□□□□ -0.3
TRAPPC3-202ENST00000373162 TOMM5Q8N4H5 51 aa13.19□□□□□ -0.3
TRAPPC3-202ENST00000373162 STPG3Q8N7X2 389 aa13.19□□□□□ -0.3
TRAPPC3-202ENST00000373162 DTD1Q8TEA8 209 aa13.19□□□□□ -0.3
TRAPPC3-202ENST00000373162 GLMPQ8WWB7 406 aa13.19□□□□□ -0.3
TRAPPC3-202ENST00000373162 METTL26Q96S19 204 aa13.19□□□□□ -0.3
TRAPPC3-202ENST00000373162 OR10J1P30954 320 aa13.18□□□□□ -0.3
TRAPPC3-202ENST00000373162 USF2Q15853 346 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC3-202ENST00000373162 GRAMD2BQ96HH9 432 aa13.18□□□□□ -0.3
TRAPPC3-202ENST00000373162 SDHCQ99643 169 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC3-202ENST00000373162 SLC25A21Q9BQT8 299 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC3-202ENST00000373162 CSTL1Q9H114 145 aa13.18□□□□□ -0.3
TRAPPC3-202ENST00000373162 TMEM231Q9H6L2 316 aa13.18□□□□□ -0.3
TRAPPC3-202ENST00000373162 U3KQ87 197 aa13.18□□□□□ -0.3
TRAPPC3-202ENST00000373162 IGKV1D-37A0A075B6S9 117 aa13.17□□□□□ -0.3
TRAPPC3-202ENST00000373162 A0A1W2PS18 150 aa13.17□□□□□ -0.3
TRAPPC3-202ENST00000373162 TOMM40O96008 361 aa13.17□□□□□ -0.3
TRAPPC3-202ENST00000373162 GIG44P09565 113 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC3-202ENST00000373162 SLC25A6P12236 298 aa13.17□□□□□ -0.3
TRAPPC3-202ENST00000373162 DEFB131AP59861 70 aa13.17□□□□□ -0.3
TRAPPC3-202ENST00000373162 PAFAH1B2P68402 229 aa13.17□□□□□ -0.3
TRAPPC3-202ENST00000373162 C16orf54Q6UWD8 224 aa13.17□□□□□ -0.3
TRAPPC3-202ENST00000373162 S100ZQ8WXG8 99 aa13.17□□□□□ -0.3
TRAPPC3-202ENST00000373162 NPIPB3Q92617 1050 aa13.17□□□□□ -0.3
TRAPPC3-202ENST00000373162 ANXA3P12429 323 aa13.16□□□□□ -0.3
TRAPPC3-202ENST00000373162 ATP5IP56385 69 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC3-202ENST00000373162 PPP1R1AQ13522 171 aa13.16□□□□□ -0.3
TRAPPC3-202ENST00000373162 ETFRF1Q6IPR1 90 aa13.16□□□□□ -0.3
TRAPPC3-202ENST00000373162 TMED4Q7Z7H5 227 aa13.16□□□□□ -0.3
TRAPPC3-202ENST00000373162 NOXA1Q86UR1 476 aa13.16□□□□□ -0.3
TRAPPC3-202ENST00000373162 GATAD1Q8WUU5 269 aa13.16□□□□□ -0.3
TRAPPC3-202ENST00000373162 AGRNO00468 2067 aa13.16□□□□□ -0.3
TRAPPC3-202ENST00000373162 MPTX1A8MV57 137 aa13.15□□□□□ -0.3
TRAPPC3-202ENST00000373162 PRSS46E5RG02 174 aa13.15□□□□□ -0.3
TRAPPC3-202ENST00000373162 SCGB2A1O75556 95 aa13.15□□□□□ -0.3
TRAPPC3-202ENST00000373162 SFT2D2O95562 160 aa13.15□□□□□ -0.3
TRAPPC3-202ENST00000373162 HNRNPCP07910 306 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRAPPC3-202ENST00000373162 BAK1Q16611 211 aa13.15□□□□□ -0.3
TRAPPC3-202ENST00000373162 TRPT1Q86TN4 253 aaKnown RBP13.15□□□□□ -0.3
TRAPPC3-202ENST00000373162 FAM90A26D6RGX4 464 aa13.14□□□□□ -0.31
TRAPPC3-202ENST00000373162 BUB3O43684 328 aa13.14□□□□□ -0.31
TRAPPC3-202ENST00000373162 IFNA10P01566 189 aa13.14□□□□□ -0.31
TRAPPC3-202ENST00000373162 LEMD1Q68G75 181 aa13.14□□□□□ -0.31
TRAPPC3-202ENST00000373162 Q8WTZ3 238 aa13.14□□□□□ -0.31
TRAPPC3-202ENST00000373162 PIGBOS1A0A0B4J2F0 54 aa13.13□□□□□ -0.31
TRAPPC3-202ENST00000373162 DNASE2O00115 360 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC3-202ENST00000373162 IL4P05112 153 aa13.13□□□□□ -0.31
TRAPPC3-202ENST00000373162 PSG1P11464 419 aa13.13□□□□□ -0.31
TRAPPC3-202ENST00000373162 BTCP35070 178 aa13.13□□□□□ -0.31
TRAPPC3-202ENST00000373162 GPX4P36969 197 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC3-202ENST00000373162 GAMTQ14353 236 aa13.13□□□□□ -0.31
TRAPPC3-202ENST00000373162 TRIQKQ629K1 86 aa13.13□□□□□ -0.31
TRAPPC3-202ENST00000373162 ACY3Q96HD9 319 aa13.13□□□□□ -0.31
TRAPPC3-202ENST00000373162 C11orf68Q9H3H3 251 aaKnown RBP13.13□□□□□ -0.31
TRAPPC3-202ENST00000373162 TMED3Q9Y3Q3 217 aa13.13□□□□□ -0.31
TRAPPC3-202ENST00000373162 IGKV1OR2-108A0A075B7D4 117 aa13.12□□□□□ -0.31
TRAPPC3-202ENST00000373162 VAMP1P23763 118 aa13.12□□□□□ -0.31
TRAPPC3-202ENST00000373162 UBE2MP61081 183 aaKnown RBP13.12□□□□□ -0.31
TRAPPC3-202ENST00000373162 ZNF846Q147U1 533 aa13.12□□□□□ -0.31
TRAPPC3-202ENST00000373162 CENPSQ8N2Z9 138 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms