RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 C10orf55Q5SWW7 151 aa18.33■□□□□ 0.52
TM9SF3-201ENST00000371142 FBLN5Q9UBX5 448 aa18.33■□□□□ 0.52
TM9SF3-201ENST00000371142 PDCD11Q14690 1871 aaKnown RBP18.33■□□□□ 0.52
TM9SF3-201ENST00000371142 KLRD1Q13241 179 aa18.33■□□□□ 0.52
TM9SF3-201ENST00000371142 CHD5Q8TDI0 1954 aa18.32■□□□□ 0.52
TM9SF3-201ENST00000371142 VMO1Q7Z5L0 202 aa18.32■□□□□ 0.52
TM9SF3-201ENST00000371142 OSTCQ9NRP0 149 aa18.32■□□□□ 0.52
TM9SF3-201ENST00000371142 IGKV2-40A0A087WW87 121 aaPredicted RBP18.32■□□□□ 0.52
TM9SF3-201ENST00000371142 A0A1W2PRE2 83 aa18.32■□□□□ 0.52
TM9SF3-201ENST00000371142 IGKV2D-40P01614 121 aaPredicted RBP18.32■□□□□ 0.52
TM9SF3-201ENST00000371142 CHTOPQ9Y3Y2 248 aaKnown RBP18.32■□□□□ 0.52
TM9SF3-201ENST00000371142 A0A0U1RRA0 63 aa18.32■□□□□ 0.52
TM9SF3-201ENST00000371142 PRR31Q5SQ13 230 aa18.32■□□□□ 0.52
TM9SF3-201ENST00000371142 CYSLTR1Q9Y271 337 aa18.32■□□□□ 0.52
TM9SF3-201ENST00000371142 GZMBP10144 247 aa18.32■□□□□ 0.52
TM9SF3-201ENST00000371142 CRYGSP22914 178 aa18.32■□□□□ 0.52
TM9SF3-201ENST00000371142 PAX2Q02962 417 aa18.32■□□□□ 0.52
TM9SF3-201ENST00000371142 IGHV2-26A0A0B4J1V2 119 aa18.31■□□□□ 0.52
TM9SF3-201ENST00000371142 DPM2O94777 84 aa18.31■□□□□ 0.52
TM9SF3-201ENST00000371142 ID3Q02535 119 aa18.31■□□□□ 0.52
TM9SF3-201ENST00000371142 CSRP1P21291 193 aaKnown RBP18.31■□□□□ 0.52
TM9SF3-201ENST00000371142 ZNF318Q5VUA4 2279 aa18.31■□□□□ 0.52
TM9SF3-201ENST00000371142 TAF1LQ8IZX4 1826 aa18.31■□□□□ 0.52
TM9SF3-201ENST00000371142 EFNA2O43921 213 aa18.31■□□□□ 0.52
TM9SF3-201ENST00000371142 STAG3L3P0CL85 134 aa18.31■□□□□ 0.52
TM9SF3-201ENST00000371142 RPL15P61313 204 aaKnown RBP18.31■□□□□ 0.52
TM9SF3-201ENST00000371142 ZNF672Q499Z4 452 aaPredicted RBP18.31■□□□□ 0.52
TM9SF3-201ENST00000371142 NPIPB5A8MRT5 1133 aa18.31■□□□□ 0.52
TM9SF3-201ENST00000371142 DEFB104AQ8WTQ1 72 aa18.31■□□□□ 0.52
TM9SF3-201ENST00000371142 TRAV41A0A0B4J266 112 aa18.3■□□□□ 0.52
TM9SF3-201ENST00000371142 CD59P13987 128 aa18.3■□□□□ 0.52
TM9SF3-201ENST00000371142 ZNF415Q09FC8 603 aa18.3■□□□□ 0.52
TM9SF3-201ENST00000371142 GTSCR1Q86UQ5 136 aa18.3■□□□□ 0.52
TM9SF3-201ENST00000371142 GGNQ86UU5 652 aa18.3■□□□□ 0.52
TM9SF3-201ENST00000371142 RNF182Q8N6D2 247 aa18.3■□□□□ 0.52
TM9SF3-201ENST00000371142 FNDC4Q9H6D8 234 aaPredicted RBP18.3■□□□□ 0.52
TM9SF3-201ENST00000371142 SLC25A20O43772 301 aa18.3■□□□□ 0.52
TM9SF3-201ENST00000371142 ZNF815PA8K554 130 aa18.3■□□□□ 0.52
TM9SF3-201ENST00000371142 TRGV11A0A075B6L2 103 aa18.3■□□□□ 0.52
TM9SF3-201ENST00000371142 F8VVB4 439 aa18.3■□□□□ 0.52
TM9SF3-201ENST00000371142 F8VWA3 439 aa18.3■□□□□ 0.52
TM9SF3-201ENST00000371142 GTF3AQ92664 365 aaKnown RBP18.3■□□□□ 0.52
TM9SF3-201ENST00000371142 LAMTOR2Q9Y2Q5 125 aa18.3■□□□□ 0.52
TM9SF3-201ENST00000371142 CRPP02741 224 aa18.3■□□□□ 0.52
TM9SF3-201ENST00000371142 C11orf68Q9H3H3 251 aaKnown RBP18.3■□□□□ 0.52
TM9SF3-201ENST00000371142 NEUROG3Q9Y4Z2 214 aa18.3■□□□□ 0.52
TM9SF3-201ENST00000371142 SPATA31B1PQ5VZV4 182 aa18.29■□□□□ 0.52
TM9SF3-201ENST00000371142 TMEM200BQ69YZ2 307 aa18.29■□□□□ 0.52
TM9SF3-201ENST00000371142 MTURNQ8N3F0 131 aa18.29■□□□□ 0.52
TM9SF3-201ENST00000371142 TRAV8-2A0A0B4J237 113 aa18.29■□□□□ 0.52
TM9SF3-201ENST00000371142 NTN3O00634 580 aaPredicted RBP18.29■□□□□ 0.52
TM9SF3-201ENST00000371142 CHCHD5Q9BSY4 110 aa18.28■□□□□ 0.52
TM9SF3-201ENST00000371142 C5orf30Q96GV9 206 aa18.28■□□□□ 0.52
TM9SF3-201ENST00000371142 DERL1Q9BUN8 251 aa18.28■□□□□ 0.52
TM9SF3-201ENST00000371142 MBNL3Q9NUK0 354 aaKnown RBP18.28■□□□□ 0.52
TM9SF3-201ENST00000371142 IGHV3-73A0A0B4J1V6 119 aa18.28■□□□□ 0.52
TM9SF3-201ENST00000371142 FAM90A9PA6NNJ1 464 aa18.28■□□□□ 0.52
TM9SF3-201ENST00000371142 FOXL1Q12952 345 aa18.28■□□□□ 0.52
TM9SF3-201ENST00000371142 TREML4Q6UXN2 200 aa18.28■□□□□ 0.52
TM9SF3-201ENST00000371142 NXT2Q9NPJ8 142 aaKnown RBP18.28■□□□□ 0.52
TM9SF3-201ENST00000371142 MST1P26927 711 aa18.28■□□□□ 0.52
TM9SF3-201ENST00000371142 WDR83OSQ9Y284 106 aa18.28■□□□□ 0.52
TM9SF3-201ENST00000371142 IGKV1-27A0A075B6S5 117 aa18.27■□□□□ 0.52
TM9SF3-201ENST00000371142 PMS2P5A8MQ11 134 aa18.27■□□□□ 0.52
TM9SF3-201ENST00000371142 ADARB2-AS1A8MUL3 147 aa18.27■□□□□ 0.52
TM9SF3-201ENST00000371142 CLDN16Q9Y5I7 305 aa18.27■□□□□ 0.52
TM9SF3-201ENST00000371142 NABP1Q96AH0 204 aa18.27■□□□□ 0.52
TM9SF3-201ENST00000371142 IGKCP01834 107 aa18.27■□□□□ 0.52
TM9SF3-201ENST00000371142 C15orf32Q32M92 178 aa18.27■□□□□ 0.52
TM9SF3-201ENST00000371142 EXOC3-AS1Q8N2X6 119 aa18.27■□□□□ 0.52
TM9SF3-201ENST00000371142 ABCA7Q8IZY2 2146 aa18.27■□□□□ 0.51
TM9SF3-201ENST00000371142 OVOL1O14753 267 aa18.27■□□□□ 0.51
TM9SF3-201ENST00000371142 ORMDL2Q53FV1 153 aa18.27■□□□□ 0.51
TM9SF3-201ENST00000371142 DOCK4Q8N1I0 1966 aa18.27■□□□□ 0.51
TM9SF3-201ENST00000371142 TEX38Q6PEX7 206 aa18.26■□□□□ 0.51
TM9SF3-201ENST00000371142 SAP30O75446 220 aa18.26■□□□□ 0.51
TM9SF3-201ENST00000371142 TSKUQ8WUA8 353 aa18.26■□□□□ 0.51
TM9SF3-201ENST00000371142 SCRT1Q9BWW7 348 aa18.26■□□□□ 0.51
TM9SF3-201ENST00000371142 GNB1LQ9BYB4 327 aa18.26■□□□□ 0.51
TM9SF3-201ENST00000371142 TIMP3P35625 211 aa18.26■□□□□ 0.51
TM9SF3-201ENST00000371142 IGHV1-8P0DP01 117 aa18.25■□□□□ 0.51
TM9SF3-201ENST00000371142 TNFRSF14Q92956 283 aa18.25■□□□□ 0.51
TM9SF3-201ENST00000371142 VGLL1Q99990 258 aa18.25■□□□□ 0.51
TM9SF3-201ENST00000371142 RPUSD1Q9UJJ7 312 aaKnown RBP18.25■□□□□ 0.51
TM9SF3-201ENST00000371142 SLC25A15Q9Y619 301 aa18.25■□□□□ 0.51
TM9SF3-201ENST00000371142 LOC105371267A0A1B0GV96 52 aa18.25■□□□□ 0.51
TM9SF3-201ENST00000371142 HOXA3O43365 443 aaPredicted RBP18.25■□□□□ 0.51
TM9SF3-201ENST00000371142 CD300EQ496F6 205 aaPredicted RBP18.25■□□□□ 0.51
TM9SF3-201ENST00000371142 CD177Q8N6Q3 437 aa18.25■□□□□ 0.51
TM9SF3-201ENST00000371142 OR9G4Q8NGQ1 327 aa18.25■□□□□ 0.51
TM9SF3-201ENST00000371142 TRAV9-2A0A087WT02 112 aa18.24■□□□□ 0.51
TM9SF3-201ENST00000371142 HIST1H2BKO60814 126 aa18.24■□□□□ 0.51
TM9SF3-201ENST00000371142 HIST1H2BJP06899 126 aa18.24■□□□□ 0.51
TM9SF3-201ENST00000371142 HIST1H2BOP23527 126 aa18.24■□□□□ 0.51
TM9SF3-201ENST00000371142 HIST1H2BBP33778 126 aa18.24■□□□□ 0.51
TM9SF3-201ENST00000371142 HIST1H2BDP58876 126 aa18.24■□□□□ 0.51
TM9SF3-201ENST00000371142 HIST1H2BCP62807 126 aa18.24■□□□□ 0.51
TM9SF3-201ENST00000371142 HIST2H2BEQ16778 126 aa18.24■□□□□ 0.51
TM9SF3-201ENST00000371142 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.24■□□□□ 0.51
TM9SF3-201ENST00000371142 HIST1H2BHQ93079 126 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms