RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 ZNF474Q6S9Z5 364 aaPredicted RBP7.52□□□□□ -1.2
SMARCA1-202ENST00000371122 FAM57AQ8TBR7 257 aa7.52□□□□□ -1.2
SMARCA1-202ENST00000371122 MCRIP2Q9BUT9 160 aaKnown RBP7.52□□□□□ -1.2
SMARCA1-202ENST00000371122 MAP1LC3CQ9BXW4 147 aa7.52□□□□□ -1.2
SMARCA1-202ENST00000371122 TRAV8-1A0A0A6YYK1 113 aa7.52□□□□□ -1.21
SMARCA1-202ENST00000371122 TMEM250H0YL14 139 aa7.52□□□□□ -1.21
SMARCA1-202ENST00000371122 LEPROTL1O95214 131 aa7.52□□□□□ -1.21
SMARCA1-202ENST00000371122 SELENOTP62341 195 aa7.52□□□□□ -1.21
SMARCA1-202ENST00000371122 LYPD2Q6UXB3 125 aa7.52□□□□□ -1.21
SMARCA1-202ENST00000371122 SPACA3Q8IXA5 215 aa7.52□□□□□ -1.21
SMARCA1-202ENST00000371122 H7C2G1 150 aa7.52□□□□□ -1.21
SMARCA1-202ENST00000371122 GGCTO75223 188 aaKnown RBP7.52□□□□□ -1.21
SMARCA1-202ENST00000371122 ZNF146Q15072 292 aa7.52□□□□□ -1.21
SMARCA1-202ENST00000371122 TMEM186Q96B77 213 aa7.52□□□□□ -1.21
SMARCA1-202ENST00000371122 DSCAML1Q8TD84 2053 aa7.52□□□□□ -1.21
SMARCA1-202ENST00000371122 SERF1AO75920 110 aa7.52□□□□□ -1.21
SMARCA1-202ENST00000371122 RELQ04864 619 aaPredicted RBP7.52□□□□□ -1.21
SMARCA1-202ENST00000371122 TREML4Q6UXN2 200 aa7.52□□□□□ -1.21
SMARCA1-202ENST00000371122 DTX1Q86Y01 620 aa7.52□□□□□ -1.21
SMARCA1-202ENST00000371122 NDUFA2O43678 99 aa7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 SS18L1O75177 396 aaPredicted RBP7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 CD5P06127 495 aa7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 PDLIM4P50479 330 aa7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 TMPRSS3P57727 454 aa7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 EFNB3Q15768 340 aa7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 CLEC2AQ6UVW9 174 aa7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 TMEM219Q86XT9 240 aa7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 OR52E5Q8NH55 327 aa7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 IGKV1D-17A0A075B6S4 117 aa7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 M0R381 172 aa7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 SMAD7O15105 426 aaKnown RBP7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 FAM106CPP0CH98 169 aa7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 WT1P19544 449 aaPredicted RBP7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 TIMP3P35625 211 aa7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 MFAP4P55083 255 aa7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 DGAT2L7PQ6IED9 249 aa7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 RNASE6Q93091 150 aaKnown RBP7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 NBEAQ8NFP9 2946 aa7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 C9JCJ5 164 aa7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 TIMM23O14925 209 aa7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 ZNF585BQ52M93 769 aa7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 TMEM78Q5T7P6 136 aa7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 CCDC144NLQ6NUI1 221 aa7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 CLEC19AQ6UXS0 136 aa7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 ZNF600Q6ZNG1 722 aa7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 EIF4E3Q8N5X7 224 aaKnown RBP7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 MDS2Q8NDY4 140 aa7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 RNF166Q96A37 237 aaPredicted RBP7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 DPM3Q9P2X0 92 aa7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 TBL2Q9Y4P3 447 aaKnown RBP7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 LSM4Q9Y4Z0 139 aaKnown RBP7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 EML5Q05BV3 1969 aa7.51□□□□□ -1.21
SMARCA1-202ENST00000371122 SRRM5B3KS81 715 aa7.5□□□□□ -1.21
SMARCA1-202ENST00000371122 MST1LQ2TV78 715 aa7.5□□□□□ -1.21
SMARCA1-202ENST00000371122 TMEM42Q69YG0 159 aa7.5□□□□□ -1.21
SMARCA1-202ENST00000371122 Q6P435 159 aa7.5□□□□□ -1.21
SMARCA1-202ENST00000371122 TMEM256Q8N2U0 113 aa7.5□□□□□ -1.21
SMARCA1-202ENST00000371122 GRAMD2BQ96HH9 432 aa7.5□□□□□ -1.21
SMARCA1-202ENST00000371122 YTHDF2Q9Y5A9 579 aaKnown RBP7.5□□□□□ -1.21
SMARCA1-202ENST00000371122 HIGD1CA8MV81 97 aa7.5□□□□□ -1.21
SMARCA1-202ENST00000371122 B9A039 149 aa7.5□□□□□ -1.21
SMARCA1-202ENST00000371122 NRN1LQ496H8 165 aa7.5□□□□□ -1.21
SMARCA1-202ENST00000371122 FAM162BQ5T6X4 162 aa7.5□□□□□ -1.21
SMARCA1-202ENST00000371122 WDR86Q86TI4 376 aa7.5□□□□□ -1.21
SMARCA1-202ENST00000371122 FBXL7Q9UJT9 491 aa7.5□□□□□ -1.21
SMARCA1-202ENST00000371122 K7EM74 188 aa7.5□□□□□ -1.21
SMARCA1-202ENST00000371122 SFTA2Q6UW10 78 aa7.5□□□□□ -1.21
SMARCA1-202ENST00000371122 EXOC3-AS1Q8N2X6 119 aa7.5□□□□□ -1.21
SMARCA1-202ENST00000371122 UPK2O00526 184 aa7.49□□□□□ -1.21
SMARCA1-202ENST00000371122 Q6ZR03 302 aa7.49□□□□□ -1.21
SMARCA1-202ENST00000371122 GGTLC1Q9BX51 225 aa7.49□□□□□ -1.21
SMARCA1-202ENST00000371122 NPIPB11E5RHQ5 1161 aa7.49□□□□□ -1.21
SMARCA1-202ENST00000371122 HIST1H1AQ02539 215 aaPredicted RBP7.49□□□□□ -1.21
SMARCA1-202ENST00000371122 SRSF9Q13242 221 aaKnown RBP eCLIP7.49□□□□□ -1.21
SMARCA1-202ENST00000371122 OSR1Q8TAX0 266 aaPredicted RBP7.49□□□□□ -1.21
SMARCA1-202ENST00000371122 WDR83OSQ9Y284 106 aa7.49□□□□□ -1.21
SMARCA1-202ENST00000371122 ARHGAP32A7KAX9 2087 aa7.49□□□□□ -1.21
SMARCA1-202ENST00000371122 RELNP78509 3460 aa7.49□□□□□ -1.21
SMARCA1-202ENST00000371122 IGKV3OR2-268A0A0C4DH90 116 aa7.49□□□□□ -1.21
SMARCA1-202ENST00000371122 DPRXA6NFQ7 191 aa7.49□□□□□ -1.21
SMARCA1-202ENST00000371122 PEX7O00628 323 aa7.49□□□□□ -1.21
SMARCA1-202ENST00000371122 YPEL1O60688 119 aa7.49□□□□□ -1.21
SMARCA1-202ENST00000371122 MMP23AO75900 390 aa7.49□□□□□ -1.21
SMARCA1-202ENST00000371122 HLA-DQA1P01909 254 aa7.49□□□□□ -1.21
SMARCA1-202ENST00000371122 WNT2P09544 360 aa7.49□□□□□ -1.21
SMARCA1-202ENST00000371122 ADMP35318 185 aa7.49□□□□□ -1.21
SMARCA1-202ENST00000371122 MAPK1IP1LQ8NDC0 245 aa7.49□□□□□ -1.21
SMARCA1-202ENST00000371122 YPEL2Q96QA6 119 aa7.49□□□□□ -1.21
SMARCA1-202ENST00000371122 MRPS18CQ9Y3D5 142 aaKnown RBP7.49□□□□□ -1.21
SMARCA1-202ENST00000371122 PLXNA2O75051 1894 aa7.49□□□□□ -1.21
SMARCA1-202ENST00000371122 A0A0G2JNJ9 132 aa7.48□□□□□ -1.21
SMARCA1-202ENST00000371122 C7orf71A4D174 169 aa7.48□□□□□ -1.21
SMARCA1-202ENST00000371122 C15orf61A6NNL5 157 aa7.48□□□□□ -1.21
SMARCA1-202ENST00000371122 TDGF1P13385 188 aa7.48□□□□□ -1.21
SMARCA1-202ENST00000371122 HOXA5P20719 270 aa7.48□□□□□ -1.21
SMARCA1-202ENST00000371122 ZNF138P52744 262 aa7.48□□□□□ -1.21
SMARCA1-202ENST00000371122 TMEM200BQ69YZ2 307 aa7.48□□□□□ -1.21
SMARCA1-202ENST00000371122 BRD3OSQ6XYD6 125 aa7.48□□□□□ -1.21
SMARCA1-202ENST00000371122 DNM1P46Q6ZS02 220 aa7.48□□□□□ -1.21
SMARCA1-202ENST00000371122 GTF2H5Q6ZYL4 71 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms