RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 MEIS3P1A6NDR6 274 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 LMX1BO60663 402 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 ZNF780AO75290 641 aaPredicted RBP2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 KCNK2O95069 426 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 ZNF682O95780 498 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 NCR2O95944 276 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 IGHV3-9P01782 118 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 AKAIN1P0CW23 69 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 LAMP1P11279 417 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 PPIBP23284 216 aaKnown RBP2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 ETV6P41212 452 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 CTBP2P56545 445 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 PAX8Q06710 450 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 JOSD1Q15040 202 aaPredicted RBP2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 CLLU1Q5K131 121 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 SPANXN3Q5MJ09 141 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 GLIPR1L1Q6UWM5 242 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 Q6ZRU5 148 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 VN1R4Q7Z5H5 301 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 C1QL2Q7Z5L3 287 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 RFLNBQ8N5W9 214 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 NTN5Q8WTR8 489 aaPredicted RBP2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 CCL17Q92583 94 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 RHNO1Q9BSD3 238 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 COMMD5Q9GZQ3 224 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 TMEM133Q9H2Q1 129 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 JPT2Q9H910 190 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 ZNF331Q9NQX6 463 aaPredicted RBP2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 PARP11Q9NR21 331 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 MSRB1Q9NZV6 116 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 INSIG2Q9Y5U4 225 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 TRAV17A0A0B4J275 112 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 IGKV1D-13A0A0B4J2D9 117 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 TRBV5-4A0A0C4DH59 114 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 A0A1B0GW64 132 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 C12orf77C9JDV5 145 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 KLF7O75840 302 aaPredicted RBP2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 IGHV4-39P01824 125 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 FRMD6-AS1P0C7T7 363 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 RBMY1A1P0DJD3 496 aaKnown RBP2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 IGKV1-13P0DP09 117 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 NTF3P20783 257 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 LPAR6P43657 344 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 NDUFA6P56556 154 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 UBE2NP61088 152 aaKnown RBP2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 ERVK-16P61578 105 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 DAZ2Q13117 558 aaKnown RBP2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 Q499Y3 187 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 ZFP69Q49AA0 526 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 CCSMST1Q4G0I0 132 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 BCL2L15Q5TBC7 163 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 MORN5Q5VZ52 161 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 RUSC1-AS1Q66K80 236 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 GLT8D1Q68CQ7 371 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 RPL22L1Q6P5R6 122 aaKnown RBP2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 DAZ4Q86SG3 579 aaKnown RBP2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 LRRTM1Q86UE6 522 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 EXOC3-AS1Q8N2X6 119 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 OR4K5Q8NGD3 323 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 OR10AD1Q8NGE0 317 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 OR10J6PQ8NGY7 276 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 OR51H1Q8NH63 302 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 PRSS3P2Q8NHM4 247 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 VOPP1Q96AW1 172 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 RTL8AQ9BWD3 113 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 PDFQ9HBH1 243 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 PLAC1Q9HBJ0 212 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 DAZ1Q9NQZ3 744 aaKnown RBP2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 DAZ3Q9NR90 486 aaKnown RBP2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 KCNIP2Q9NS61 270 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 XCL2Q9UBD3 114 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 MTFP1Q9UDX5 166 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 SOX21Q9Y651 276 aaPredicted RBP2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 DNAH9Q9NYC9 4486 aa2.7□□□□□ -1.98
ECHDC1-205ENST00000368295 DSCAMO60469 2012 aa2.69□□□□□ -1.98
ECHDC1-205ENST00000368295 CCDC88CQ9P219 2028 aa2.69□□□□□ -1.98
ECHDC1-205ENST00000368295 DNAJC13O75165 2243 aa2.69□□□□□ -1.98
ECHDC1-205ENST00000368295 TRAV8-1A0A0A6YYK1 113 aa2.69□□□□□ -1.98
ECHDC1-205ENST00000368295 TRAV4A0A0B4J268 109 aa2.69□□□□□ -1.98
ECHDC1-205ENST00000368295 IGHV4-61A0A0C4DH41 118 aa2.69□□□□□ -1.98
ECHDC1-205ENST00000368295 A0A0G2JN53 185 aa2.69□□□□□ -1.98
ECHDC1-205ENST00000368295 TMEM212A6NML5 194 aa2.69□□□□□ -1.98
ECHDC1-205ENST00000368295 CDC42EP2O14613 210 aa2.69□□□□□ -1.98
ECHDC1-205ENST00000368295 PSPHP1O15172 72 aa2.69□□□□□ -1.98
ECHDC1-205ENST00000368295 BCL2L11O43521 198 aa2.69□□□□□ -1.98
ECHDC1-205ENST00000368295 SS18L1O75177 396 aaPredicted RBP2.69□□□□□ -1.98
ECHDC1-205ENST00000368295 DUS4LO95620 317 aaKnown RBP2.69□□□□□ -1.98
ECHDC1-205ENST00000368295 CXorf1O96002 111 aa2.69□□□□□ -1.98
ECHDC1-205ENST00000368295 IGHV4-59P01825 116 aa2.69□□□□□ -1.98
ECHDC1-205ENST00000368295 MAS1P04201 325 aa2.69□□□□□ -1.98
ECHDC1-205ENST00000368295 CECR9P0C854 216 aa2.69□□□□□ -1.98
ECHDC1-205ENST00000368295 P0DMU3 169 aa2.69□□□□□ -1.98
ECHDC1-205ENST00000368295 FAM231AP0DMU4 169 aa2.69□□□□□ -1.98
ECHDC1-205ENST00000368295 FAM231CP0DMU5 169 aa2.69□□□□□ -1.98
ECHDC1-205ENST00000368295 CCL1P22362 96 aa2.69□□□□□ -1.98
ECHDC1-205ENST00000368295 GADD45AP24522 165 aa2.69□□□□□ -1.98
ECHDC1-205ENST00000368295 OR10J1P30954 320 aa2.69□□□□□ -1.98
ECHDC1-205ENST00000368295 GUCA1AP43080 201 aaPredicted RBP2.69□□□□□ -1.98
ECHDC1-205ENST00000368295 ATP5G3P48201 142 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms