RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 LCN15Q6UWW0 184 aa16.5■□□□□ 0.23
MAP1LC3A-201ENST00000360668 MAP1LC3BQ9GZQ8 125 aa16.5■□□□□ 0.23
MAP1LC3A-201ENST00000360668 KLK9Q9UKQ9 250 aa16.5■□□□□ 0.23
MAP1LC3A-201ENST00000360668 K7EIM0 57 aa16.49■□□□□ 0.23
MAP1LC3A-201ENST00000360668 LINC00869P0C866 280 aa16.49■□□□□ 0.23
MAP1LC3A-201ENST00000360668 HIST1H1BP16401 226 aaKnown RBP16.49■□□□□ 0.23
MAP1LC3A-201ENST00000360668 RBMS3Q6XE24 437 aaKnown RBP16.49■□□□□ 0.23
MAP1LC3A-201ENST00000360668 CYP2G1PQ6ZSU1 146 aa16.49■□□□□ 0.23
MAP1LC3A-201ENST00000360668 OR5T1Q8NG75 326 aa16.49■□□□□ 0.23
MAP1LC3A-201ENST00000360668 ZNF48Q96MX3 618 aaPredicted RBP16.49■□□□□ 0.23
MAP1LC3A-201ENST00000360668 THYN1Q9P016 225 aa16.49■□□□□ 0.23
MAP1LC3A-201ENST00000360668 ZFHX3Q15911 3703 aa16.49■□□□□ 0.23
MAP1LC3A-201ENST00000360668 ACANP16112 2415 aa16.48■□□□□ 0.23
MAP1LC3A-201ENST00000360668 IGKV1D-37A0A075B6S9 117 aa16.48■□□□□ 0.23
MAP1LC3A-201ENST00000360668 TCRBV4S1A1TA0A5B7 111 aa16.48■□□□□ 0.23
MAP1LC3A-201ENST00000360668 LINC01548A6NM66 108 aa16.48■□□□□ 0.23
MAP1LC3A-201ENST00000360668 IFNA1P01562 189 aa16.48■□□□□ 0.23
MAP1LC3A-201ENST00000360668 IGHG2P01859 326 aa16.48■□□□□ 0.23
MAP1LC3A-201ENST00000360668 ECSCRQ19T08 205 aa16.48■□□□□ 0.23
MAP1LC3A-201ENST00000360668 OR4X1Q8NH49 305 aa16.48■□□□□ 0.23
MAP1LC3A-201ENST00000360668 IGHV3-21A0A0B4J1V1 117 aa16.47■□□□□ 0.23
MAP1LC3A-201ENST00000360668 LOC102723971A0A1B0GUV8 181 aa16.47■□□□□ 0.23
MAP1LC3A-201ENST00000360668 A0A1B0GV50 99 aa16.47■□□□□ 0.23
MAP1LC3A-201ENST00000360668 ZFP92A6NM28 416 aa16.47■□□□□ 0.23
MAP1LC3A-201ENST00000360668 SCO1O75880 301 aa16.47■□□□□ 0.23
MAP1LC3A-201ENST00000360668 FOSL1P15407 271 aa16.47■□□□□ 0.23
MAP1LC3A-201ENST00000360668 PPT1P50897 306 aa16.47■□□□□ 0.23
MAP1LC3A-201ENST00000360668 SELENOTP62341 195 aa16.47■□□□□ 0.23
MAP1LC3A-201ENST00000360668 FAM122CQ6P4D5 195 aa16.47■□□□□ 0.23
MAP1LC3A-201ENST00000360668 SSX7Q7RTT5 188 aa16.47■□□□□ 0.23
MAP1LC3A-201ENST00000360668 TRGV9Q99603 122 aa16.47■□□□□ 0.23
MAP1LC3A-201ENST00000360668 RARRES2Q99969 163 aa16.47■□□□□ 0.23
MAP1LC3A-201ENST00000360668 NKX6-2Q9C056 277 aaPredicted RBP16.47■□□□□ 0.23
MAP1LC3A-201ENST00000360668 IGF1P05019 195 aa16.47■□□□□ 0.23
MAP1LC3A-201ENST00000360668 ICAM4Q14773 271 aa16.47■□□□□ 0.23
MAP1LC3A-201ENST00000360668 GUCA2BQ16661 112 aa16.47■□□□□ 0.23
MAP1LC3A-201ENST00000360668 C19orf54Q5BKX5 351 aa16.47■□□□□ 0.23
MAP1LC3A-201ENST00000360668 GCSAMLQ5JQS6 135 aa16.47■□□□□ 0.23
MAP1LC3A-201ENST00000360668 C9orf152Q5JTZ5 239 aa16.47■□□□□ 0.23
MAP1LC3A-201ENST00000360668 RAB24Q969Q5 203 aa16.47■□□□□ 0.23
MAP1LC3A-201ENST00000360668 VPREB3Q9UKI3 123 aa16.47■□□□□ 0.23
MAP1LC3A-201ENST00000360668 SRP19P09132 144 aaKnown RBP16.46■□□□□ 0.23
MAP1LC3A-201ENST00000360668 CDC34P49427 236 aaPredicted RBP16.46■□□□□ 0.23
MAP1LC3A-201ENST00000360668 SLC35E3Q7Z769 313 aa16.46■□□□□ 0.23
MAP1LC3A-201ENST00000360668 C19orf24Q9BVV8 132 aa16.46■□□□□ 0.23
MAP1LC3A-201ENST00000360668 SLC25A22Q9H936 323 aa16.46■□□□□ 0.23
MAP1LC3A-201ENST00000360668 TNFRSF19Q9NS68 423 aa16.46■□□□□ 0.23
MAP1LC3A-201ENST00000360668 TRAV41A0A0B4J266 112 aa16.45■□□□□ 0.22
MAP1LC3A-201ENST00000360668 G3V318 75 aa16.45■□□□□ 0.22
MAP1LC3A-201ENST00000360668 BCL2P10415 239 aa16.45■□□□□ 0.22
MAP1LC3A-201ENST00000360668 HAGHQ16775 308 aa16.45■□□□□ 0.22
MAP1LC3A-201ENST00000360668 ATRAIDQ6UW56 229 aa16.45■□□□□ 0.22
MAP1LC3A-201ENST00000360668 VAX2Q9UIW0 290 aa16.45■□□□□ 0.22
MAP1LC3A-201ENST00000360668 NF1P21359 2839 aa16.44■□□□□ 0.22
MAP1LC3A-201ENST00000360668 A0A1W2PPV4 95 aa16.44■□□□□ 0.22
MAP1LC3A-201ENST00000360668 CLN5O75503 358 aa16.44■□□□□ 0.22
MAP1LC3A-201ENST00000360668 BLCAPP62952 87 aa16.44■□□□□ 0.22
MAP1LC3A-201ENST00000360668 SOHLH1Q5JUK2 328 aa16.44■□□□□ 0.22
MAP1LC3A-201ENST00000360668 YAE1D1Q9NRH1 226 aa16.44■□□□□ 0.22
MAP1LC3A-201ENST00000360668 GNG13Q9P2W3 67 aa16.44■□□□□ 0.22
MAP1LC3A-201ENST00000360668 TRBV9A0A0B4J1U6 114 aa16.43■□□□□ 0.22
MAP1LC3A-201ENST00000360668 IGLC1P0CG04 106 aa16.43■□□□□ 0.22
MAP1LC3A-201ENST00000360668 GATA2P23769 480 aaPredicted RBP16.43■□□□□ 0.22
MAP1LC3A-201ENST00000360668 SRP14P37108 136 aaKnown RBP16.43■□□□□ 0.22
MAP1LC3A-201ENST00000360668 PSMB3P49720 205 aa16.43■□□□□ 0.22
MAP1LC3A-201ENST00000360668 ZNF90Q03938 601 aa16.43■□□□□ 0.22
MAP1LC3A-201ENST00000360668 BTN1A1Q13410 526 aa16.43■□□□□ 0.22
MAP1LC3A-201ENST00000360668 ZNF580Q9UK33 172 aa16.43■□□□□ 0.22
MAP1LC3A-201ENST00000360668 SETD2Q9BYW2 2564 aaPredicted RBP16.43■□□□□ 0.22
MAP1LC3A-201ENST00000360668 OR2J3O76001 311 aa16.43■□□□□ 0.22
MAP1LC3A-201ENST00000360668 NDUFB8O95169 186 aa16.43■□□□□ 0.22
MAP1LC3A-201ENST00000360668 NPBWR1P48145 328 aa16.43■□□□□ 0.22
MAP1LC3A-201ENST00000360668 FGF8P55075 233 aaPredicted RBP16.43■□□□□ 0.22
MAP1LC3A-201ENST00000360668 MFAP4P55083 255 aa16.43■□□□□ 0.22
MAP1LC3A-201ENST00000360668 RHOBP62745 196 aa16.43■□□□□ 0.22
MAP1LC3A-201ENST00000360668 IL17RELQ6ZVW7 336 aa16.43■□□□□ 0.22
MAP1LC3A-201ENST00000360668 CLRN3Q8NCR9 226 aa16.43■□□□□ 0.22
MAP1LC3A-201ENST00000360668 VN1R17PQ8TDU5 208 aa16.43■□□□□ 0.22
MAP1LC3A-201ENST00000360668 RXFP4Q8TDU9 374 aa16.43■□□□□ 0.22
MAP1LC3A-201ENST00000360668 MANBALQ9NQG1 85 aa16.43■□□□□ 0.22
MAP1LC3A-201ENST00000360668 FBXL7Q9UJT9 491 aa16.43■□□□□ 0.22
MAP1LC3A-201ENST00000360668 HOXA3O43365 443 aaPredicted RBP16.42■□□□□ 0.22
MAP1LC3A-201ENST00000360668 GSX1Q9H4S2 264 aaPredicted RBP16.42■□□□□ 0.22
MAP1LC3A-201ENST00000360668 C21orf62Q9NYP8 219 aa16.42■□□□□ 0.22
MAP1LC3A-201ENST00000360668 TRAV30A0A087WSZ9 112 aa16.41■□□□□ 0.22
MAP1LC3A-201ENST00000360668 AP4M1O00189 453 aa16.41■□□□□ 0.22
MAP1LC3A-201ENST00000360668 HNF1AP20823 631 aa16.41■□□□□ 0.22
MAP1LC3A-201ENST00000360668 SIGLECL1Q8N7X8 197 aa16.41■□□□□ 0.22
MAP1LC3A-201ENST00000360668 ZNF355PQ9NSJ1 428 aa16.41■□□□□ 0.22
MAP1LC3A-201ENST00000360668 NIPBLQ6KC79 2804 aaeCLIP16.4■□□□□ 0.22
MAP1LC3A-201ENST00000360668 PSMB11A5LHX3 300 aa16.4■□□□□ 0.22
MAP1LC3A-201ENST00000360668 BRI3O95415 125 aa16.4■□□□□ 0.22
MAP1LC3A-201ENST00000360668 FABP1P07148 127 aa16.4■□□□□ 0.22
MAP1LC3A-201ENST00000360668 OR5G3P0C626 314 aa16.4■□□□□ 0.22
MAP1LC3A-201ENST00000360668 STAG3L2P0CL84 134 aa16.4■□□□□ 0.22
MAP1LC3A-201ENST00000360668 STAG3L3P0CL85 134 aa16.4■□□□□ 0.22
MAP1LC3A-201ENST00000360668 FCGR2BP31994 310 aaPredicted RBP16.4■□□□□ 0.22
MAP1LC3A-201ENST00000360668 RHOGP84095 191 aa16.4■□□□□ 0.22
MAP1LC3A-201ENST00000360668 TMEM86BQ8N661 226 aa16.4■□□□□ 0.22
MAP1LC3A-201ENST00000360668 NECAP1Q8NC96 275 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms