RNA–Protein interactions for RNA: ENST00000355703.3

PCNX3-201, Transcript of pecanex 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNX3, Length 7,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-201ENST00000355703 LIMS2Q7Z4I7 341 aa13.16□□□□□ -0.3
PCNX3-201ENST00000355703 AQP3Q92482 292 aa13.16□□□□□ -0.3
PCNX3-201ENST00000355703 PRDM13Q9H4Q3 707 aa13.16□□□□□ -0.3
PCNX3-201ENST00000355703 RPUSD1Q9UJJ7 312 aaKnown RBP13.16□□□□□ -0.3
PCNX3-201ENST00000355703 VIRMAQ69YN4 1812 aaKnown RBP13.16□□□□□ -0.3
PCNX3-201ENST00000355703 TRBV9A0A0B4J1U6 114 aa13.16□□□□□ -0.3
PCNX3-201ENST00000355703 MYO16Q9Y6X6 1858 aa13.16□□□□□ -0.3
PCNX3-201ENST00000355703 IGLV3-16A0A075B6K0 115 aa13.15□□□□□ -0.3
PCNX3-201ENST00000355703 B4DSR2 109 aa13.15□□□□□ -0.3
PCNX3-201ENST00000355703 SEC11AP67812 179 aa13.15□□□□□ -0.3
PCNX3-201ENST00000355703 RASL11AQ6T310 242 aa13.15□□□□□ -0.3
PCNX3-201ENST00000355703 DNAJC30Q96LL9 226 aa13.15□□□□□ -0.3
PCNX3-201ENST00000355703 PSG8Q9UQ74 426 aa13.15□□□□□ -0.3
PCNX3-201ENST00000355703 ZNF646O15015 1829 aaPredicted RBP13.15□□□□□ -0.3
PCNX3-201ENST00000355703 OVOL1O14753 267 aa13.15□□□□□ -0.3
PCNX3-201ENST00000355703 ANGP03950 147 aaKnown RBP13.15□□□□□ -0.3
PCNX3-201ENST00000355703 KLF17Q5JT82 389 aaPredicted RBP13.15□□□□□ -0.3
PCNX3-201ENST00000355703 EXOC3-AS1Q8N2X6 119 aa13.15□□□□□ -0.3
PCNX3-201ENST00000355703 C14orf178Q8N769 122 aaPredicted RBP13.15□□□□□ -0.3
PCNX3-201ENST00000355703 SMIM8Q96KF7 97 aa13.15□□□□□ -0.3
PCNX3-201ENST00000355703 SERF1AO75920 110 aa13.15□□□□□ -0.3
PCNX3-201ENST00000355703 CD300CQ08708 224 aa13.15□□□□□ -0.31
PCNX3-201ENST00000355703 HOXB1P14653 301 aaPredicted RBP13.14□□□□□ -0.31
PCNX3-201ENST00000355703 CXCL2P19875 107 aa13.14□□□□□ -0.31
PCNX3-201ENST00000355703 KIAA0040Q15053 153 aa13.14□□□□□ -0.31
PCNX3-201ENST00000355703 ANKRD39Q53RE8 183 aa13.14□□□□□ -0.31
PCNX3-201ENST00000355703 Q6ZQT7 251 aa13.14□□□□□ -0.31
PCNX3-201ENST00000355703 EFNA2O43921 213 aa13.14□□□□□ -0.31
PCNX3-201ENST00000355703 IGKV1-5P01602 117 aa13.14□□□□□ -0.31
PCNX3-201ENST00000355703 ASPHD2Q6ICH7 369 aa13.14□□□□□ -0.31
PCNX3-201ENST00000355703 FAM90A18PA6NE21 464 aa13.14□□□□□ -0.31
PCNX3-201ENST00000355703 FAM90A16PA6NEW6 464 aa13.14□□□□□ -0.31
PCNX3-201ENST00000355703 FAM90A9PA6NNJ1 464 aa13.14□□□□□ -0.31
PCNX3-201ENST00000355703 FAM90A5PA8MXJ8 464 aa13.14□□□□□ -0.31
PCNX3-201ENST00000355703 FAM90A15PP0C7V4 464 aa13.14□□□□□ -0.31
PCNX3-201ENST00000355703 FAM90A14PP0C7W9 464 aa13.14□□□□□ -0.31
PCNX3-201ENST00000355703 Q8TAT8 98 aa13.14□□□□□ -0.31
PCNX3-201ENST00000355703 RMI2Q96E14 147 aa13.14□□□□□ -0.31
PCNX3-201ENST00000355703 DDX60Q8IY21 1712 aaKnown RBP13.14□□□□□ -0.31
PCNX3-201ENST00000355703 FAM90A10PA6NDY2 464 aa13.14□□□□□ -0.31
PCNX3-201ENST00000355703 FAM90A8PA6NJQ4 464 aa13.14□□□□□ -0.31
PCNX3-201ENST00000355703 TMEM238C9JI98 176 aa13.14□□□□□ -0.31
PCNX3-201ENST00000355703 FAM90A13PP0C7W8 464 aa13.14□□□□□ -0.31
PCNX3-201ENST00000355703 FAM90A24PP0C7X0 464 aa13.14□□□□□ -0.31
PCNX3-201ENST00000355703 C2orf68Q2NKX9 166 aa13.14□□□□□ -0.31
PCNX3-201ENST00000355703 DEPPQ9NTK1 212 aa13.14□□□□□ -0.31
PCNX3-201ENST00000355703 APOC4P55056 127 aa13.14□□□□□ -0.31
PCNX3-201ENST00000355703 ZNF672Q499Z4 452 aaPredicted RBP13.14□□□□□ -0.31
PCNX3-201ENST00000355703 CFHR5Q9BXR6 569 aa13.14□□□□□ -0.31
PCNX3-201ENST00000355703 DDTP30046 118 aa13.13□□□□□ -0.31
PCNX3-201ENST00000355703 UCP3P55916 312 aa13.13□□□□□ -0.31
PCNX3-201ENST00000355703 RPL23P62829 140 aaKnown RBP13.13□□□□□ -0.31
PCNX3-201ENST00000355703 MSRB3Q8IXL7 192 aa13.13□□□□□ -0.31
PCNX3-201ENST00000355703 TMEM105Q8N8V8 129 aa13.13□□□□□ -0.31
PCNX3-201ENST00000355703 FOXG1P55316 489 aaPredicted RBP13.13□□□□□ -0.31
PCNX3-201ENST00000355703 A0A1W2PPI3 338 aa13.13□□□□□ -0.31
PCNX3-201ENST00000355703 AZU1P20160 251 aa13.13□□□□□ -0.31
PCNX3-201ENST00000355703 LCN12Q6JVE5 192 aa13.13□□□□□ -0.31
PCNX3-201ENST00000355703 RBM38Q9H0Z9 239 aaKnown RBP13.13□□□□□ -0.31
PCNX3-201ENST00000355703 HEATR1Q9H583 2144 aaKnown RBP13.13□□□□□ -0.31
PCNX3-201ENST00000355703 FANCMQ8IYD8 2048 aa13.13□□□□□ -0.31
PCNX3-201ENST00000355703 PSG7Q13046 419 aa13.13□□□□□ -0.31
PCNX3-201ENST00000355703 PUSL1Q8N0Z8 303 aaKnown RBP13.13□□□□□ -0.31
PCNX3-201ENST00000355703 LINC00312Q9Y6C7 94 aa13.13□□□□□ -0.31
PCNX3-201ENST00000355703 IZUMO1RA6ND01 250 aa13.13□□□□□ -0.31
PCNX3-201ENST00000355703 SVIPQ8NHG7 77 aa13.13□□□□□ -0.31
PCNX3-201ENST00000355703 C14orf132Q9NPU4 83 aa13.13□□□□□ -0.31
PCNX3-201ENST00000355703 LINC00587B1AMM8 73 aa13.13□□□□□ -0.31
PCNX3-201ENST00000355703 IGKV1-39P01597 117 aa13.13□□□□□ -0.31
PCNX3-201ENST00000355703 IGKV1D-39P04432 117 aa13.13□□□□□ -0.31
PCNX3-201ENST00000355703 C9orf62Q8N4C0 152 aa13.13□□□□□ -0.31
PCNX3-201ENST00000355703 CACNG8Q8WXS5 425 aa13.13□□□□□ -0.31
PCNX3-201ENST00000355703 CKAP5Q14008 2032 aa13.13□□□□□ -0.31
PCNX3-201ENST00000355703 CD55P08174 381 aa13.12□□□□□ -0.31
PCNX3-201ENST00000355703 CA7P43166 264 aa13.12□□□□□ -0.31
PCNX3-201ENST00000355703 ZFAND6Q6FIF0 208 aa13.12□□□□□ -0.31
PCNX3-201ENST00000355703 DSCR8Q96T75 97 aa13.12□□□□□ -0.31
PCNX3-201ENST00000355703 TINCRA0A1B0GVN0 87 aa13.12□□□□□ -0.31
PCNX3-201ENST00000355703 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.12□□□□□ -0.31
PCNX3-201ENST00000355703 PMS2P5A8MQ11 134 aa13.12□□□□□ -0.31
PCNX3-201ENST00000355703 MRPL14Q6P1L8 145 aaKnown RBP13.12□□□□□ -0.31
PCNX3-201ENST00000355703 MYOM1P52179 1685 aa13.12□□□□□ -0.31
PCNX3-201ENST00000355703 ADMP35318 185 aa13.12□□□□□ -0.31
PCNX3-201ENST00000355703 MIXL1Q9H2W2 232 aa13.12□□□□□ -0.31
PCNX3-201ENST00000355703 C15orf61A6NNL5 157 aa13.12□□□□□ -0.31
PCNX3-201ENST00000355703 MTCL1Q9Y4B5 1905 aaKnown RBP13.11□□□□□ -0.31
PCNX3-201ENST00000355703 J3QKU1 62 aa13.11□□□□□ -0.31
PCNX3-201ENST00000355703 TMEM187Q14656 261 aa13.11□□□□□ -0.31
PCNX3-201ENST00000355703 C8orf31Q8N9H6 132 aa13.11□□□□□ -0.31
PCNX3-201ENST00000355703 SMKR1H3BMG3 65 aa13.11□□□□□ -0.31
PCNX3-201ENST00000355703 SPTBP11277 2137 aa13.11□□□□□ -0.31
PCNX3-201ENST00000355703 FAM90A7PA6NKC0 464 aa13.11□□□□□ -0.31
PCNX3-201ENST00000355703 FAM90A22PA8MWA6 464 aa13.11□□□□□ -0.31
PCNX3-201ENST00000355703 FAM90A12PA8MX19 464 aa13.11□□□□□ -0.31
PCNX3-201ENST00000355703 FAM90A23PA8MXZ1 464 aa13.11□□□□□ -0.31
PCNX3-201ENST00000355703 C9orf153Q5TBE3 101 aa13.11□□□□□ -0.31
PCNX3-201ENST00000355703 RAMP3O60896 148 aa13.11□□□□□ -0.31
PCNX3-201ENST00000355703 CRLF1O75462 422 aa13.11□□□□□ -0.31
PCNX3-201ENST00000355703 SAMD5Q5TGI4 173 aa13.11□□□□□ -0.31
PCNX3-201ENST00000355703 CD300LDQ6UXZ3 194 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms