RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 CD33P20138 364 aa12.35□□□□□ -0.43
LMX1B-201ENST00000355497 NSUN5P1Q3KNT7 163 aa12.35□□□□□ -0.43
LMX1B-201ENST00000355497 HIST1H2BLQ99880 126 aa12.35□□□□□ -0.43
LMX1B-201ENST00000355497 WNT2P09544 360 aa12.34□□□□□ -0.43
LMX1B-201ENST00000355497 SRD5A1P18405 259 aa12.34□□□□□ -0.43
LMX1B-201ENST00000355497 CSRP3P50461 194 aa12.34□□□□□ -0.43
LMX1B-201ENST00000355497 TRAV8-1A0A0A6YYK1 113 aa12.34□□□□□ -0.43
LMX1B-201ENST00000355497 TGFBR3LH3BV60 316 aa12.34□□□□□ -0.43
LMX1B-201ENST00000355497 PAX4O43316 350 aa12.34□□□□□ -0.43
LMX1B-201ENST00000355497 FGF16O43320 207 aa12.34□□□□□ -0.43
LMX1B-201ENST00000355497 TNFSF13O75888 250 aa12.34□□□□□ -0.43
LMX1B-201ENST00000355497 LHX2P50458 406 aa12.34□□□□□ -0.43
LMX1B-201ENST00000355497 RCHY1Q96PM5 261 aa12.34□□□□□ -0.43
LMX1B-201ENST00000355497 ITGB1BP1O14713 200 aa12.34□□□□□ -0.43
LMX1B-201ENST00000355497 TIMM23O14925 209 aa12.34□□□□□ -0.43
LMX1B-201ENST00000355497 ZNF883P0CG24 379 aa12.34□□□□□ -0.43
LMX1B-201ENST00000355497 DUTP33316 252 aaKnown RBP12.34□□□□□ -0.43
LMX1B-201ENST00000355497 VSIRQ9H7M9 311 aa12.34□□□□□ -0.43
LMX1B-201ENST00000355497 LAMB2P55268 1798 aa12.34□□□□□ -0.43
LMX1B-201ENST00000355497 IGKV2-40A0A087WW87 121 aaPredicted RBP12.34□□□□□ -0.43
LMX1B-201ENST00000355497 IGKV2D-40P01614 121 aaPredicted RBP12.34□□□□□ -0.43
LMX1B-201ENST00000355497 CMC4P56277 68 aaPredicted RBP12.34□□□□□ -0.43
LMX1B-201ENST00000355497 LY6G6FQ5SQ64 297 aa12.34□□□□□ -0.43
LMX1B-201ENST00000355497 GTF3AQ92664 365 aaKnown RBP12.34□□□□□ -0.43
LMX1B-201ENST00000355497 NPIPB5A8MRT5 1133 aa12.33□□□□□ -0.43
LMX1B-201ENST00000355497 TFF1P04155 84 aa12.33□□□□□ -0.43
LMX1B-201ENST00000355497 RASL10AQ92737 203 aa12.33□□□□□ -0.43
LMX1B-201ENST00000355497 FBLN5Q9UBX5 448 aa12.33□□□□□ -0.43
LMX1B-201ENST00000355497 NUP214P35658 2090 aaPredicted RBP12.33□□□□□ -0.44
LMX1B-201ENST00000355497 SLC25A48Q6ZT89 311 aaKnown RBP12.33□□□□□ -0.44
LMX1B-201ENST00000355497 SLC25A28Q96A46 364 aa12.33□□□□□ -0.44
LMX1B-201ENST00000355497 IMMP1LQ96LU5 166 aa12.33□□□□□ -0.44
LMX1B-201ENST00000355497 OVOL2Q9BRP0 275 aa12.33□□□□□ -0.44
LMX1B-201ENST00000355497 TMEM242Q9NWH2 141 aa12.33□□□□□ -0.44
LMX1B-201ENST00000355497 C1orf122Q6ZSJ8 110 aa12.33□□□□□ -0.44
LMX1B-201ENST00000355497 ID3Q02535 119 aa12.33□□□□□ -0.44
LMX1B-201ENST00000355497 C2orf82Q6UX34 121 aa12.33□□□□□ -0.44
LMX1B-201ENST00000355497 DTX1Q86Y01 620 aa12.33□□□□□ -0.44
LMX1B-201ENST00000355497 WDR83OSQ9Y284 106 aa12.33□□□□□ -0.44
LMX1B-201ENST00000355497 D6R8Y8 96 aa12.33□□□□□ -0.44
LMX1B-201ENST00000355497 FAM166AQ6J272 317 aa12.33□□□□□ -0.44
LMX1B-201ENST00000355497 TRAV41A0A0B4J266 112 aa12.32□□□□□ -0.44
LMX1B-201ENST00000355497 MPZP25189 248 aa12.32□□□□□ -0.44
LMX1B-201ENST00000355497 TNFRSF14Q92956 283 aa12.32□□□□□ -0.44
LMX1B-201ENST00000355497 HIST3H2BBQ8N257 126 aa12.32□□□□□ -0.44
LMX1B-201ENST00000355497 METRNQ9UJH8 293 aa12.32□□□□□ -0.44
LMX1B-201ENST00000355497 TIMP3P35625 211 aa12.32□□□□□ -0.44
LMX1B-201ENST00000355497 TEX43Q6ZNM6 134 aa12.32□□□□□ -0.44
LMX1B-201ENST00000355497 A0A087WX48 190 aa12.32□□□□□ -0.44
LMX1B-201ENST00000355497 INS-IGF2F8WCM5 200 aa12.32□□□□□ -0.44
LMX1B-201ENST00000355497 NCR2O95944 276 aa12.32□□□□□ -0.44
LMX1B-201ENST00000355497 INSP01308 110 aa12.32□□□□□ -0.44
LMX1B-201ENST00000355497 CRIM1Q9NZV1 1036 aa12.32□□□□□ -0.44
LMX1B-201ENST00000355497 MBNL3Q9NUK0 354 aaKnown RBP12.31□□□□□ -0.44
LMX1B-201ENST00000355497 PLXNB2O15031 1838 aa12.31□□□□□ -0.44
LMX1B-201ENST00000355497 BCL6BQ8N143 479 aaPredicted RBP12.31□□□□□ -0.44
LMX1B-201ENST00000355497 ADAMTS7Q9UKP4 1686 aa12.31□□□□□ -0.44
LMX1B-201ENST00000355497 ARID1AO14497 2285 aa12.31□□□□□ -0.44
LMX1B-201ENST00000355497 IGHV3-73A0A0B4J1V6 119 aa12.31□□□□□ -0.44
LMX1B-201ENST00000355497 RASL11AQ6T310 242 aa12.31□□□□□ -0.44
LMX1B-201ENST00000355497 OR10W1Q8NGF6 305 aa12.31□□□□□ -0.44
LMX1B-201ENST00000355497 H0YIZ8 118 aa12.31□□□□□ -0.44
LMX1B-201ENST00000355497 LHFPL4Q7Z7J7 247 aa12.31□□□□□ -0.44
LMX1B-201ENST00000355497 ZNF876PQ49A33 203 aa12.31□□□□□ -0.44
LMX1B-201ENST00000355497 TREML4Q6UXN2 200 aa12.31□□□□□ -0.44
LMX1B-201ENST00000355497 IGHV1-18A0A0C4DH31 117 aa12.3□□□□□ -0.44
LMX1B-201ENST00000355497 IGKV1-9A0A0C4DH69 117 aa12.3□□□□□ -0.44
LMX1B-201ENST00000355497 MRAPQ8TCY5 172 aa12.3□□□□□ -0.44
LMX1B-201ENST00000355497 ESDP10768 282 aa12.3□□□□□ -0.44
LMX1B-201ENST00000355497 GAGE2AQ6NT46 116 aa12.3□□□□□ -0.44
LMX1B-201ENST00000355497 ADAMTSL1Q8N6G6 1762 aa12.3□□□□□ -0.44
LMX1B-201ENST00000355497 AMBPP02760 352 aa12.29□□□□□ -0.44
LMX1B-201ENST00000355497 CXCL1P09341 107 aa12.29□□□□□ -0.44
LMX1B-201ENST00000355497 RBMY1FQ15415 496 aaKnown RBP12.29□□□□□ -0.44
LMX1B-201ENST00000355497 FAM90A2PQ658T7 463 aa12.29□□□□□ -0.44
LMX1B-201ENST00000355497 LYZL1Q6UWQ5 148 aa12.29□□□□□ -0.44
LMX1B-201ENST00000355497 A0A0A6YYD4 124 aa12.29□□□□□ -0.44
LMX1B-201ENST00000355497 SAP30O75446 220 aa12.29□□□□□ -0.44
LMX1B-201ENST00000355497 RPL36AP83881 106 aaKnown RBP12.29□□□□□ -0.44
LMX1B-201ENST00000355497 GUSBP1Q15486 140 aa12.29□□□□□ -0.44
LMX1B-201ENST00000355497 DMRTC2Q8IXT2 367 aaPredicted RBP12.29□□□□□ -0.44
LMX1B-201ENST00000355497 RPL36ALQ969Q0 106 aaKnown RBP12.29□□□□□ -0.44
LMX1B-201ENST00000355497 TRBV24-1A0A075B6N3 115 aa12.29□□□□□ -0.44
LMX1B-201ENST00000355497 PRB4P10163 310 aaPredicted RBP12.29□□□□□ -0.44
LMX1B-201ENST00000355497 RPL15P61313 204 aaKnown RBP12.29□□□□□ -0.44
LMX1B-201ENST00000355497 TRAV40A0A0B4J280 105 aa12.29□□□□□ -0.44
LMX1B-201ENST00000355497 SRSF7Q16629 238 aaKnown RBP eCLIP12.29□□□□□ -0.44
LMX1B-201ENST00000355497 KIAA1217Q5T5P2 1943 aa12.29□□□□□ -0.44
LMX1B-201ENST00000355497 LYNX1G3V0Z9 82 aa12.29□□□□□ -0.44
LMX1B-201ENST00000355497 LEPROTO15243 131 aa12.29□□□□□ -0.44
LMX1B-201ENST00000355497 LYNX1P0DP58 116 aa12.29□□□□□ -0.44
LMX1B-201ENST00000355497 CEACAM1P13688 526 aa12.29□□□□□ -0.44
LMX1B-201ENST00000355497 LTBRP36941 435 aa12.29□□□□□ -0.44
LMX1B-201ENST00000355497 KLF17Q5JT82 389 aaPredicted RBP12.29□□□□□ -0.44
LMX1B-201ENST00000355497 SPATA31B1PQ5VZV4 182 aa12.29□□□□□ -0.44
LMX1B-201ENST00000355497 ZNF625Q96I27 306 aaPredicted RBP12.29□□□□□ -0.44
LMX1B-201ENST00000355497 NAA38Q9BRA0 125 aaKnown RBP12.29□□□□□ -0.44
LMX1B-201ENST00000355497 SLC25A39Q9BZJ4 359 aaPredicted RBP12.29□□□□□ -0.44
LMX1B-201ENST00000355497 PMS2P5A8MQ11 134 aa12.28□□□□□ -0.44
LMX1B-201ENST00000355497 MRPL14Q6P1L8 145 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms