RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 TRGV9Q99603 122 aa12.18□□□□□ -0.46
CTSA-202ENST00000354880 GSX1Q9H4S2 264 aaPredicted RBP12.18□□□□□ -0.46
CTSA-202ENST00000354880 C21orf62Q9NYP8 219 aa12.18□□□□□ -0.46
CTSA-202ENST00000354880 S4R3C0 116 aa12.18□□□□□ -0.46
CTSA-202ENST00000354880 H3BUA1 57 aa12.18□□□□□ -0.46
CTSA-202ENST00000354880 CLDN34H7C241 214 aa12.18□□□□□ -0.46
CTSA-202ENST00000354880 YIF1AO95070 293 aa12.18□□□□□ -0.46
CTSA-202ENST00000354880 BRI3O95415 125 aa12.18□□□□□ -0.46
CTSA-202ENST00000354880 LINC00869P0C866 280 aa12.18□□□□□ -0.46
CTSA-202ENST00000354880 GATA2P23769 480 aaPredicted RBP12.18□□□□□ -0.46
CTSA-202ENST00000354880 SELENOTP62341 195 aa12.18□□□□□ -0.46
CTSA-202ENST00000354880 SLC7A5P1Q8MH63 180 aa12.18□□□□□ -0.46
CTSA-202ENST00000354880 RPP25LQ8N5L8 163 aaKnown RBP12.18□□□□□ -0.46
CTSA-202ENST00000354880 OR10G4Q8NGN3 311 aa12.18□□□□□ -0.46
CTSA-202ENST00000354880 OR10G9Q8NGN4 311 aa12.18□□□□□ -0.46
CTSA-202ENST00000354880 OR10G7Q8NGN6 311 aa12.18□□□□□ -0.46
CTSA-202ENST00000354880 INAFM1C9JVW0 142 aa12.17□□□□□ -0.46
CTSA-202ENST00000354880 IGLC1P0CG04 106 aa12.17□□□□□ -0.46
CTSA-202ENST00000354880 CFHR3Q02985 330 aa12.17□□□□□ -0.46
CTSA-202ENST00000354880 GCSAMLQ5JQS6 135 aa12.17□□□□□ -0.46
CTSA-202ENST00000354880 HRH4Q9H3N8 390 aa12.17□□□□□ -0.46
CTSA-202ENST00000354880 FAM181BA6NEQ2 426 aa12.16□□□□□ -0.46
CTSA-202ENST00000354880 FAM223BA6NKX1 122 aa12.16□□□□□ -0.46
CTSA-202ENST00000354880 GNG7O60262 68 aa12.16□□□□□ -0.46
CTSA-202ENST00000354880 TRGV3P03979 118 aa12.16□□□□□ -0.46
CTSA-202ENST00000354880 H2AFB1P0C5Y9 115 aa12.16□□□□□ -0.46
CTSA-202ENST00000354880 FAM223AQ8IWN6 122 aa12.16□□□□□ -0.46
CTSA-202ENST00000354880 Q8N2B8 174 aa12.16□□□□□ -0.46
CTSA-202ENST00000354880 RCC1LQ96I51 464 aaKnown RBP12.16□□□□□ -0.46
CTSA-202ENST00000354880 MED9Q9NWA0 146 aa12.16□□□□□ -0.46
CTSA-202ENST00000354880 PFDN2Q9UHV9 154 aa12.16□□□□□ -0.46
CTSA-202ENST00000354880 TRAV30A0A087WSZ9 112 aa12.16□□□□□ -0.46
CTSA-202ENST00000354880 F8W735 103 aaPredicted RBP12.16□□□□□ -0.46
CTSA-202ENST00000354880 IGLV1-40P01703 118 aa12.16□□□□□ -0.46
CTSA-202ENST00000354880 IGHV3-23P01764 117 aa12.16□□□□□ -0.46
CTSA-202ENST00000354880 FCGR2BP31994 310 aaPredicted RBP12.16□□□□□ -0.46
CTSA-202ENST00000354880 ZNF726P1Q15940 193 aa12.16□□□□□ -0.46
CTSA-202ENST00000354880 Q56UQ5 140 aa12.16□□□□□ -0.46
CTSA-202ENST00000354880 LYPD6BQ8NI32 183 aa12.16□□□□□ -0.46
CTSA-202ENST00000354880 TXN2Q99757 166 aa12.16□□□□□ -0.46
CTSA-202ENST00000354880 TEX46H3BTG2 121 aa12.15□□□□□ -0.46
CTSA-202ENST00000354880 IGKV1-17P01599 117 aa12.15□□□□□ -0.46
CTSA-202ENST00000354880 TPPP2P59282 170 aa12.15□□□□□ -0.46
CTSA-202ENST00000354880 HILS1P60008 231 aa12.15□□□□□ -0.46
CTSA-202ENST00000354880 ATP5G2Q06055 141 aa12.15□□□□□ -0.46
CTSA-202ENST00000354880 TIGITQ495A1 244 aa12.15□□□□□ -0.46
CTSA-202ENST00000354880 FAM122CQ6P4D5 195 aa12.15□□□□□ -0.46
CTSA-202ENST00000354880 ZNF329Q86UD4 541 aa12.15□□□□□ -0.46
CTSA-202ENST00000354880 ZNF502Q8TBZ5 544 aa12.15□□□□□ -0.46
CTSA-202ENST00000354880 SFT2D1Q8WV19 159 aa12.15□□□□□ -0.46
CTSA-202ENST00000354880 ACTR3CQ9C0K3 210 aaPredicted RBP12.15□□□□□ -0.46
CTSA-202ENST00000354880 F8P00451 2351 aa12.14□□□□□ -0.47
CTSA-202ENST00000354880 IGHG4P01861 327 aa12.14□□□□□ -0.47
CTSA-202ENST00000354880 RNASE1P07998 156 aaKnown RBP12.14□□□□□ -0.47
CTSA-202ENST00000354880 PF4V1P10720 104 aa12.14□□□□□ -0.47
CTSA-202ENST00000354880 SSX7Q7RTT5 188 aa12.14□□□□□ -0.47
CTSA-202ENST00000354880 COMMD7Q86VX2 200 aa12.14□□□□□ -0.47
CTSA-202ENST00000354880 EEF1AKMT3Q96AZ1 226 aa12.14□□□□□ -0.47
CTSA-202ENST00000354880 SLC25A22Q9H936 323 aa12.14□□□□□ -0.47
CTSA-202ENST00000354880 TRBV7-1A0A0A6YYK4 115 aa12.14□□□□□ -0.47
CTSA-202ENST00000354880 CTXND1A0A1B0GTU2 59 aa12.14□□□□□ -0.47
CTSA-202ENST00000354880 A0A1W2PPV4 95 aa12.14□□□□□ -0.47
CTSA-202ENST00000354880 OR2T8A6NH00 312 aa12.14□□□□□ -0.47
CTSA-202ENST00000354880 SEC14L6B5MCN3 397 aa12.14□□□□□ -0.47
CTSA-202ENST00000354880 SCGB2A1O75556 95 aa12.14□□□□□ -0.47
CTSA-202ENST00000354880 FABP1P07148 127 aa12.14□□□□□ -0.47
CTSA-202ENST00000354880 CDC34P49427 236 aaPredicted RBP12.14□□□□□ -0.47
CTSA-202ENST00000354880 RPL15P61313 204 aaKnown RBP12.14□□□□□ -0.47
CTSA-202ENST00000354880 MBD3L1Q8WWY6 194 aa12.14□□□□□ -0.47
CTSA-202ENST00000354880 USMG5Q96IX5 58 aa12.14□□□□□ -0.47
CTSA-202ENST00000354880 KLK15Q9H2R5 256 aa12.14□□□□□ -0.47
CTSA-202ENST00000354880 A0A1B0GV50 99 aa12.13□□□□□ -0.47
CTSA-202ENST00000354880 HBE1P02100 147 aa12.13□□□□□ -0.47
CTSA-202ENST00000354880 PSG1P11464 419 aa12.13□□□□□ -0.47
CTSA-202ENST00000354880 RAB9AP51151 201 aa12.13□□□□□ -0.47
CTSA-202ENST00000354880 SLC35B1P78383 322 aa12.13□□□□□ -0.47
CTSA-202ENST00000354880 LCN15Q6UWW0 184 aa12.13□□□□□ -0.47
CTSA-202ENST00000354880 RAB24Q969Q5 203 aa12.13□□□□□ -0.47
CTSA-202ENST00000354880 JMJD8Q96S16 334 aa12.13□□□□□ -0.47
CTSA-202ENST00000354880 C19orf24Q9BVV8 132 aa12.13□□□□□ -0.47
CTSA-202ENST00000354880 SERTAD4Q9NUC0 356 aa12.13□□□□□ -0.47
CTSA-202ENST00000354880 GAR1Q9NY12 217 aaKnown RBP12.13□□□□□ -0.47
CTSA-202ENST00000354880 FN1P02751 2386 aaKnown RBP12.12□□□□□ -0.47
CTSA-202ENST00000354880 TRAV1-1A0A0B4J248 108 aa12.12□□□□□ -0.47
CTSA-202ENST00000354880 TMEM89A2RUT3 159 aa12.12□□□□□ -0.47
CTSA-202ENST00000354880 MAP1LC3B2A6NCE7 125 aa12.12□□□□□ -0.47
CTSA-202ENST00000354880 CYSRT1A8MQ03 144 aa12.12□□□□□ -0.47
CTSA-202ENST00000354880 CRYBA1P05813 215 aa12.12□□□□□ -0.47
CTSA-202ENST00000354880 RD3LP0DJH9 198 aa12.12□□□□□ -0.47
CTSA-202ENST00000354880 PSMB8P28062 276 aa12.12□□□□□ -0.47
CTSA-202ENST00000354880 GPR183P32249 361 aa12.12□□□□□ -0.47
CTSA-202ENST00000354880 YPEL3P61236 119 aaPredicted RBP12.12□□□□□ -0.47
CTSA-202ENST00000354880 RHOBP62745 196 aa12.12□□□□□ -0.47
CTSA-202ENST00000354880 SPSB3Q6PJ21 355 aa12.12□□□□□ -0.47
CTSA-202ENST00000354880 Q6ZSV7 163 aa12.12□□□□□ -0.47
CTSA-202ENST00000354880 GATAD1Q8WUU5 269 aa12.12□□□□□ -0.47
CTSA-202ENST00000354880 CCDC140Q96MF4 163 aa12.12□□□□□ -0.47
CTSA-202ENST00000354880 ATP6V0BQ99437 205 aa12.12□□□□□ -0.47
CTSA-202ENST00000354880 PFDN5Q99471 154 aa12.12□□□□□ -0.47
CTSA-202ENST00000354880 MAP1LC3BQ9GZQ8 125 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms