RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 OR5AC1P0C628 307 aa11.6□□□□□ -0.55
PDGFA-201ENST00000354513 VAMP1P23763 118 aa11.6□□□□□ -0.55
PDGFA-201ENST00000354513 UBE2MP61081 183 aaKnown RBP11.6□□□□□ -0.55
PDGFA-201ENST00000354513 HSPE1P61604 102 aaKnown RBP11.6□□□□□ -0.55
PDGFA-201ENST00000354513 LGALS9CQ6DKI2 356 aa11.6□□□□□ -0.55
PDGFA-201ENST00000354513 TCF24Q7RTU0 167 aa11.6□□□□□ -0.55
PDGFA-201ENST00000354513 H2BFWTQ7Z2G1 175 aa11.6□□□□□ -0.55
PDGFA-201ENST00000354513 GATAD1Q8WUU5 269 aa11.6□□□□□ -0.55
PDGFA-201ENST00000354513 TRAV14DV4A0A0A6YYC5 116 aa11.59□□□□□ -0.55
PDGFA-201ENST00000354513 A0A1B0GU03 582 aa11.59□□□□□ -0.55
PDGFA-201ENST00000354513 MPTX1A8MV57 137 aa11.59□□□□□ -0.55
PDGFA-201ENST00000354513 OR4E1P0C645 316 aa11.59□□□□□ -0.55
PDGFA-201ENST00000354513 ANXA3P12429 323 aa11.59□□□□□ -0.55
PDGFA-201ENST00000354513 SUPT4H1P63272 117 aaKnown RBP11.59□□□□□ -0.55
PDGFA-201ENST00000354513 DHODHQ02127 395 aa11.59□□□□□ -0.55
PDGFA-201ENST00000354513 PPP1R1AQ13522 171 aa11.59□□□□□ -0.55
PDGFA-201ENST00000354513 RGS21Q2M5E4 152 aa11.59□□□□□ -0.55
PDGFA-201ENST00000354513 TRIM16LQ309B1 348 aa11.59□□□□□ -0.55
PDGFA-201ENST00000354513 C4orf46Q504U0 113 aa11.59□□□□□ -0.55
PDGFA-201ENST00000354513 TMEM217Q8N7C4 229 aa11.59□□□□□ -0.55
PDGFA-201ENST00000354513 OR4A16Q8NH70 328 aa11.59□□□□□ -0.55
PDGFA-201ENST00000354513 PINX1Q96BK5 328 aaKnown RBP11.59□□□□□ -0.55
PDGFA-201ENST00000354513 RARRES2Q99969 163 aa11.59□□□□□ -0.55
PDGFA-201ENST00000354513 IGHV3-66A0A0C4DH42 116 aa11.58□□□□□ -0.56
PDGFA-201ENST00000354513 GNG7O60262 68 aa11.58□□□□□ -0.56
PDGFA-201ENST00000354513 SFT2D2O95562 160 aa11.58□□□□□ -0.56
PDGFA-201ENST00000354513 UCP1P25874 307 aa11.58□□□□□ -0.56
PDGFA-201ENST00000354513 PRR20EP86478 221 aa11.58□□□□□ -0.56
PDGFA-201ENST00000354513 PRR20CP86479 221 aa11.58□□□□□ -0.56
PDGFA-201ENST00000354513 PRR20DP86480 221 aa11.58□□□□□ -0.56
PDGFA-201ENST00000354513 PRR20BP86481 221 aa11.58□□□□□ -0.56
PDGFA-201ENST00000354513 PRR20AP86496 221 aa11.58□□□□□ -0.56
PDGFA-201ENST00000354513 TMEM187Q14656 261 aa11.58□□□□□ -0.56
PDGFA-201ENST00000354513 OR11H2Q8NH07 326 aa11.58□□□□□ -0.56
PDGFA-201ENST00000354513 GLYATL2Q8WU03 294 aa11.58□□□□□ -0.56
PDGFA-201ENST00000354513 TMEM222Q9H0R3 208 aa11.58□□□□□ -0.56
PDGFA-201ENST00000354513 MS4A6AQ9H2W1 248 aa11.58□□□□□ -0.56
PDGFA-201ENST00000354513 PRR13Q9NZ81 148 aa11.58□□□□□ -0.56
PDGFA-201ENST00000354513 A0A0B4J293 547 aa11.57□□□□□ -0.56
PDGFA-201ENST00000354513 A0A0G2JRQ6 117 aa11.57□□□□□ -0.56
PDGFA-201ENST00000354513 INMT-MINDY4F8WBC2 141 aa11.57□□□□□ -0.56
PDGFA-201ENST00000354513 INS-IGF2F8WCM5 200 aa11.57□□□□□ -0.56
PDGFA-201ENST00000354513 DEFB4AO15263 64 aa11.57□□□□□ -0.56
PDGFA-201ENST00000354513 DFFBO76075 338 aa11.57□□□□□ -0.56
PDGFA-201ENST00000354513 GIG44P09565 113 aaPredicted RBP11.57□□□□□ -0.56
PDGFA-201ENST00000354513 RNASE2P10153 161 aaKnown RBP11.57□□□□□ -0.56
PDGFA-201ENST00000354513 LEMD1Q68G75 181 aa11.57□□□□□ -0.56
PDGFA-201ENST00000354513 FNDC4Q9H6D8 234 aaPredicted RBP11.57□□□□□ -0.56
PDGFA-201ENST00000354513 PUS1Q9Y606 427 aaKnown RBP eCLIP11.57□□□□□ -0.56
PDGFA-201ENST00000354513 C9orf170A2RU37 121 aa11.56□□□□□ -0.56
PDGFA-201ENST00000354513 ST8SIA3O43173 380 aa11.56□□□□□ -0.56
PDGFA-201ENST00000354513 TMEM50AO95807 157 aa11.56□□□□□ -0.56
PDGFA-201ENST00000354513 CA1P00915 261 aaPredicted RBP11.56□□□□□ -0.56
PDGFA-201ENST00000354513 CMC4P56277 68 aaPredicted RBP11.56□□□□□ -0.56
PDGFA-201ENST00000354513 DEFB131AP59861 70 aa11.56□□□□□ -0.56
PDGFA-201ENST00000354513 DHRS2Q13268 280 aa11.56□□□□□ -0.56
PDGFA-201ENST00000354513 ZNF600Q6ZNG1 722 aa11.56□□□□□ -0.56
PDGFA-201ENST00000354513 Q8NAQ8 132 aa11.56□□□□□ -0.56
PDGFA-201ENST00000354513 SEC22CQ9BRL7 303 aa11.56□□□□□ -0.56
PDGFA-201ENST00000354513 MARVELD1Q9BSK0 173 aa11.56□□□□□ -0.56
PDGFA-201ENST00000354513 ATG12O94817 140 aa11.55□□□□□ -0.56
PDGFA-201ENST00000354513 CDS2O95674 445 aa11.55□□□□□ -0.56
PDGFA-201ENST00000354513 SRPXP78539 464 aa11.55□□□□□ -0.56
PDGFA-201ENST00000354513 ERHP84090 104 aaKnown RBP11.55□□□□□ -0.56
PDGFA-201ENST00000354513 TMEM268Q5VZI3 342 aa11.55□□□□□ -0.56
PDGFA-201ENST00000354513 SELENOHQ8IZQ5 122 aaKnown RBP11.55□□□□□ -0.56
PDGFA-201ENST00000354513 LGI3Q8N145 548 aa11.55□□□□□ -0.56
PDGFA-201ENST00000354513 LHFPL5Q8TAF8 219 aa11.55□□□□□ -0.56
PDGFA-201ENST00000354513 C11orf45Q8TAV5 145 aa11.55□□□□□ -0.56
PDGFA-201ENST00000354513 GINS3Q9BRX5 216 aa11.55□□□□□ -0.56
PDGFA-201ENST00000354513 FBXL17Q9UF56 701 aa11.55□□□□□ -0.56
PDGFA-201ENST00000354513 TMEM56-RWDD3S4R434 201 aa11.55□□□□□ -0.56
PDGFA-201ENST00000354513 TRAV2A0A0B4J234 112 aa11.54□□□□□ -0.56
PDGFA-201ENST00000354513 IL5P05113 134 aa11.54□□□□□ -0.56
PDGFA-201ENST00000354513 C4BPBP20851 252 aa11.54□□□□□ -0.56
PDGFA-201ENST00000354513 AKR1C2P52895 323 aa11.54□□□□□ -0.56
PDGFA-201ENST00000354513 MLANAQ16655 118 aa11.54□□□□□ -0.56
PDGFA-201ENST00000354513 BSXQ3C1V8 233 aa11.54□□□□□ -0.56
PDGFA-201ENST00000354513 RNASE11Q8TAA1 199 aaKnown RBP11.54□□□□□ -0.56
PDGFA-201ENST00000354513 RBPMSQ93062 196 aaKnown RBP11.54□□□□□ -0.56
PDGFA-201ENST00000354513 IL22RA2Q969J5 263 aa11.54□□□□□ -0.56
PDGFA-201ENST00000354513 K7EQG2 157 aa11.53□□□□□ -0.56
PDGFA-201ENST00000354513 PRAF2O60831 178 aa11.53□□□□□ -0.56
PDGFA-201ENST00000354513 RBMY1A1P0DJD3 496 aaKnown RBP11.53□□□□□ -0.56
PDGFA-201ENST00000354513 RBMY1CP0DJD4 496 aa11.53□□□□□ -0.56
PDGFA-201ENST00000354513 NPBWR1P48145 328 aa11.53□□□□□ -0.56
PDGFA-201ENST00000354513 OXA1LQ15070 435 aa11.53□□□□□ -0.56
PDGFA-201ENST00000354513 RBMY1FQ15415 496 aaKnown RBP11.53□□□□□ -0.56
PDGFA-201ENST00000354513 TRPT1Q86TN4 253 aaKnown RBP11.53□□□□□ -0.56
PDGFA-201ENST00000354513 COQ8AQ8NI60 647 aa11.53□□□□□ -0.56
PDGFA-201ENST00000354513 ZNF431Q8TF32 576 aaPredicted RBP11.53□□□□□ -0.56
PDGFA-201ENST00000354513 GPN1Q9HCN4 374 aaPredicted RBP11.53□□□□□ -0.56
PDGFA-201ENST00000354513 PIGBOS1A0A0B4J2F0 54 aa11.52□□□□□ -0.57
PDGFA-201ENST00000354513 PAFAH1B2P68402 229 aa11.52□□□□□ -0.57
PDGFA-201ENST00000354513 Q6ZRM9 215 aa11.52□□□□□ -0.57
PDGFA-201ENST00000354513 SLC35G3Q8N808 338 aa11.52□□□□□ -0.57
PDGFA-201ENST00000354513 LRTM2Q8N967 370 aa11.52□□□□□ -0.57
PDGFA-201ENST00000354513 RRNAD1Q96FB5 475 aaKnown RBP11.52□□□□□ -0.57
PDGFA-201ENST00000354513 MFFQ9GZY8 342 aa11.52□□□□□ -0.57
PDGFA-201ENST00000354513 APLNQ9ULZ1 77 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms