RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 OR10J4P0C629 311 aa13.29□□□□□ -0.28
SAMM50-201ENST00000350028 UBE2L3P68036 154 aaKnown RBP13.29□□□□□ -0.28
SAMM50-201ENST00000350028 MORN5Q5VZ52 161 aa13.29□□□□□ -0.28
SAMM50-201ENST00000350028 PERPQ96FX8 193 aa13.29□□□□□ -0.28
SAMM50-201ENST00000350028 SFRP2Q96HF1 295 aa13.29□□□□□ -0.28
SAMM50-201ENST00000350028 PAXXQ9BUH6 204 aa13.29□□□□□ -0.28
SAMM50-201ENST00000350028 WNT10AQ9GZT5 417 aa13.29□□□□□ -0.28
SAMM50-201ENST00000350028 USP9XQ93008 2570 aaPredicted RBP13.29□□□□□ -0.28
SAMM50-201ENST00000350028 ARHGAP32A7KAX9 2087 aa13.28□□□□□ -0.28
SAMM50-201ENST00000350028 HELTA6NFD8 242 aa13.28□□□□□ -0.28
SAMM50-201ENST00000350028 PLXNB1O43157 2135 aa13.28□□□□□ -0.28
SAMM50-201ENST00000350028 HOXA5P20719 270 aa13.28□□□□□ -0.28
SAMM50-201ENST00000350028 CRYBB3P26998 211 aa13.28□□□□□ -0.28
SAMM50-201ENST00000350028 PLP1P60201 277 aa13.28□□□□□ -0.28
SAMM50-201ENST00000350028 HES1Q14469 280 aa13.28□□□□□ -0.28
SAMM50-201ENST00000350028 C19orf35Q6ZS72 473 aa13.28□□□□□ -0.28
SAMM50-201ENST00000350028 STXBP6Q8NFX7 210 aa13.28□□□□□ -0.28
SAMM50-201ENST00000350028 ELOVL1Q9BW60 279 aa13.28□□□□□ -0.28
SAMM50-201ENST00000350028 OR51M1Q9H341 326 aa13.28□□□□□ -0.28
SAMM50-201ENST00000350028 AURKAIP1Q9NWT8 199 aaPredicted RBP13.28□□□□□ -0.28
SAMM50-201ENST00000350028 PGPEP1LA6NFU8 196 aa13.27□□□□□ -0.28
SAMM50-201ENST00000350028 PPP5D1E7EU14 171 aa13.27□□□□□ -0.28
SAMM50-201ENST00000350028 I3L2K1 104 aa13.27□□□□□ -0.28
SAMM50-201ENST00000350028 HIST1H2BKO60814 126 aa13.27□□□□□ -0.28
SAMM50-201ENST00000350028 HIST1H2BJP06899 126 aa13.27□□□□□ -0.28
SAMM50-201ENST00000350028 HIST1H2BOP23527 126 aa13.27□□□□□ -0.28
SAMM50-201ENST00000350028 HIST1H2BBP33778 126 aa13.27□□□□□ -0.28
SAMM50-201ENST00000350028 NDUFA6P56556 154 aa13.27□□□□□ -0.28
SAMM50-201ENST00000350028 HIST1H2BDP58876 126 aa13.27□□□□□ -0.28
SAMM50-201ENST00000350028 LMO4P61968 165 aa13.27□□□□□ -0.28
SAMM50-201ENST00000350028 HIST1H2BCP62807 126 aa13.27□□□□□ -0.28
SAMM50-201ENST00000350028 SUMO1P63165 101 aaKnown RBP13.27□□□□□ -0.28
SAMM50-201ENST00000350028 LCN2P80188 198 aa13.27□□□□□ -0.28
SAMM50-201ENST00000350028 EBI3Q14213 229 aa13.27□□□□□ -0.28
SAMM50-201ENST00000350028 FXYD3Q14802 87 aa13.27□□□□□ -0.28
SAMM50-201ENST00000350028 HIST2H2BEQ16778 126 aa13.27□□□□□ -0.28
SAMM50-201ENST00000350028 C5orf64Q2M2E5 130 aa13.27□□□□□ -0.28
SAMM50-201ENST00000350028 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.27□□□□□ -0.28
SAMM50-201ENST00000350028 RUSC1-AS1Q66K80 236 aa13.27□□□□□ -0.28
SAMM50-201ENST00000350028 OR10G8Q8NGN5 311 aa13.27□□□□□ -0.28
SAMM50-201ENST00000350028 HIST1H2BHQ93079 126 aa13.27□□□□□ -0.28
SAMM50-201ENST00000350028 HIST1H2BNQ99877 126 aa13.27□□□□□ -0.28
SAMM50-201ENST00000350028 HIST1H2BMQ99879 126 aa13.27□□□□□ -0.28
SAMM50-201ENST00000350028 TCEAL7Q9BRU2 100 aa13.27□□□□□ -0.28
SAMM50-201ENST00000350028 TBL2Q9Y4P3 447 aaKnown RBP13.27□□□□□ -0.28
SAMM50-201ENST00000350028 DMRT1Q9Y5R6 373 aa13.27□□□□□ -0.28
SAMM50-201ENST00000350028 GGTLC3B5MD39 225 aa13.27□□□□□ -0.29
SAMM50-201ENST00000350028 TYMSP04818 313 aa13.27□□□□□ -0.29
SAMM50-201ENST00000350028 TRGC1P0CF51 173 aa13.27□□□□□ -0.29
SAMM50-201ENST00000350028 FOXL1Q12952 345 aa13.27□□□□□ -0.29
SAMM50-201ENST00000350028 LINC00305Q7Z4B0 112 aa13.27□□□□□ -0.29
SAMM50-201ENST00000350028 FRZBQ92765 325 aa13.27□□□□□ -0.29
SAMM50-201ENST00000350028 NAV3Q8IVL0 2385 aa13.26□□□□□ -0.29
SAMM50-201ENST00000350028 A0A1W2PPQ1 181 aa13.26□□□□□ -0.29
SAMM50-201ENST00000350028 ZNF98A6NK75 572 aa13.26□□□□□ -0.29
SAMM50-201ENST00000350028 PHOX2AO14813 284 aa13.26□□□□□ -0.29
SAMM50-201ENST00000350028 HYPMO75409 117 aa13.26□□□□□ -0.29
SAMM50-201ENST00000350028 TOX4O94842 621 aa13.26□□□□□ -0.29
SAMM50-201ENST00000350028 ORM2P19652 201 aa13.26□□□□□ -0.29
SAMM50-201ENST00000350028 FAM3BP58499 235 aaPredicted RBP13.26□□□□□ -0.29
SAMM50-201ENST00000350028 TEX38Q6PEX7 206 aa13.26□□□□□ -0.29
SAMM50-201ENST00000350028 Q8N6K4 173 aa13.26□□□□□ -0.29
SAMM50-201ENST00000350028 OR1B1Q8NGR6 318 aa13.26□□□□□ -0.29
SAMM50-201ENST00000350028 IGHV3-21A0A0B4J1V1 117 aa13.25□□□□□ -0.29
SAMM50-201ENST00000350028 CD24P25063 80 aa13.25□□□□□ -0.29
SAMM50-201ENST00000350028 MEOX2P50222 304 aa13.25□□□□□ -0.29
SAMM50-201ENST00000350028 PDLIM4P50479 330 aa13.25□□□□□ -0.29
SAMM50-201ENST00000350028 UBE2E1P51965 193 aa13.25□□□□□ -0.29
SAMM50-201ENST00000350028 DYNAPQ8N1N2 210 aa13.25□□□□□ -0.29
SAMM50-201ENST00000350028 BPESC1Q9GZL8 116 aa13.25□□□□□ -0.29
SAMM50-201ENST00000350028 SPTBN1Q01082 2364 aaKnown RBP13.25□□□□□ -0.29
SAMM50-201ENST00000350028 IGLC1P0CG04 106 aa13.25□□□□□ -0.29
SAMM50-201ENST00000350028 PYYP10082 97 aa13.25□□□□□ -0.29
SAMM50-201ENST00000350028 GNG4P50150 75 aa13.25□□□□□ -0.29
SAMM50-201ENST00000350028 ZNF562Q6V9R5 426 aa13.25□□□□□ -0.29
SAMM50-201ENST00000350028 FXYD5Q96DB9 178 aa13.25□□□□□ -0.29
SAMM50-201ENST00000350028 C12orf57Q99622 126 aa13.25□□□□□ -0.29
SAMM50-201ENST00000350028 UTP20O75691 2785 aaKnown RBP13.24□□□□□ -0.29
SAMM50-201ENST00000350028 K7EN84 100 aa13.24□□□□□ -0.29
SAMM50-201ENST00000350028 S100A9P06702 114 aaKnown RBP13.24□□□□□ -0.29
SAMM50-201ENST00000350028 FABP1P07148 127 aa13.24□□□□□ -0.29
SAMM50-201ENST00000350028 HNF1AP20823 631 aa13.24□□□□□ -0.29
SAMM50-201ENST00000350028 CDX1P47902 265 aaPredicted RBP13.24□□□□□ -0.29
SAMM50-201ENST00000350028 TAS2R60P59551 318 aa13.24□□□□□ -0.29
SAMM50-201ENST00000350028 CLEC12BQ2HXU8 276 aa13.24□□□□□ -0.29
SAMM50-201ENST00000350028 CENPWQ5EE01 88 aa13.24□□□□□ -0.29
SAMM50-201ENST00000350028 TBX15Q96SF7 602 aa13.24□□□□□ -0.29
SAMM50-201ENST00000350028 TIGITQ495A1 244 aa13.23□□□□□ -0.29
SAMM50-201ENST00000350028 IGFBPL1Q8WX77 278 aa13.23□□□□□ -0.29
SAMM50-201ENST00000350028 TENM4Q6N022 2769 aa13.22□□□□□ -0.29
SAMM50-201ENST00000350028 TRAV9-1A0A075B6T8 112 aa13.22□□□□□ -0.29
SAMM50-201ENST00000350028 NPIPB5A8MRT5 1133 aa13.22□□□□□ -0.29
SAMM50-201ENST00000350028 K7EIM0 57 aa13.22□□□□□ -0.29
SAMM50-201ENST00000350028 IGHV4-39P01824 125 aa13.22□□□□□ -0.29
SAMM50-201ENST00000350028 RNF224P0DH78 156 aa13.22□□□□□ -0.29
SAMM50-201ENST00000350028 TMEM11P17152 192 aa13.22□□□□□ -0.29
SAMM50-201ENST00000350028 CX3CL1P78423 397 aa13.22□□□□□ -0.29
SAMM50-201ENST00000350028 SGMS2Q8NHU3 365 aa13.22□□□□□ -0.29
SAMM50-201ENST00000350028 RASL11BQ9BPW5 248 aa13.22□□□□□ -0.29
SAMM50-201ENST00000350028 LPAR2Q9HBW0 351 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms