RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 GTSF1Q8WW33 167 aa12.48□□□□□ -0.41
LMNA-201ENST00000347559 TMEM14BQ9NUH8 114 aa12.48□□□□□ -0.41
LMNA-201ENST00000347559 BOKQ9UMX3 212 aaPredicted RBP12.48□□□□□ -0.41
LMNA-201ENST00000347559 PTPRBP23467 1997 aa12.47□□□□□ -0.41
LMNA-201ENST00000347559 CYC1P08574 325 aa12.47□□□□□ -0.41
LMNA-201ENST00000347559 LTBRP36941 435 aa12.47□□□□□ -0.41
LMNA-201ENST00000347559 TMEM177Q53S58 311 aa12.47□□□□□ -0.41
LMNA-201ENST00000347559 CD177Q8N6Q3 437 aa12.47□□□□□ -0.41
LMNA-201ENST00000347559 IFI27L2Q9H2X8 130 aa12.47□□□□□ -0.41
LMNA-201ENST00000347559 RPP21Q9H633 154 aaKnown RBP12.47□□□□□ -0.41
LMNA-201ENST00000347559 JKAMPQ9P055 326 aa12.47□□□□□ -0.41
LMNA-201ENST00000347559 ICE1Q9Y2F5 2266 aa12.47□□□□□ -0.41
LMNA-201ENST00000347559 TNFSF15O95150 251 aa12.47□□□□□ -0.41
LMNA-201ENST00000347559 P01737 135 aa12.47□□□□□ -0.41
LMNA-201ENST00000347559 SSBP2P81877 361 aaPredicted RBP12.47□□□□□ -0.41
LMNA-201ENST00000347559 NHLH1Q02575 133 aa12.47□□□□□ -0.41
LMNA-201ENST00000347559 WDR82Q6UXN9 313 aa12.47□□□□□ -0.41
LMNA-201ENST00000347559 OR10W1Q8NGF6 305 aa12.47□□□□□ -0.41
LMNA-201ENST00000347559 THYN1Q9P016 225 aa12.47□□□□□ -0.41
LMNA-201ENST00000347559 ABCA1O95477 2261 aa12.47□□□□□ -0.41
LMNA-201ENST00000347559 A8MWL6 223 aa12.46□□□□□ -0.41
LMNA-201ENST00000347559 RNFT1Q5M7Z0 435 aa12.46□□□□□ -0.41
LMNA-201ENST00000347559 DAZAP1Q96EP5 407 aaKnown RBP12.46□□□□□ -0.41
LMNA-201ENST00000347559 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.46□□□□□ -0.41
LMNA-201ENST00000347559 H3BRM9 83 aa12.46□□□□□ -0.41
LMNA-201ENST00000347559 CD46P15529 392 aa12.46□□□□□ -0.41
LMNA-201ENST00000347559 AZU1P20160 251 aa12.46□□□□□ -0.41
LMNA-201ENST00000347559 KLF14Q8TD94 323 aaPredicted RBP12.46□□□□□ -0.41
LMNA-201ENST00000347559 FOXA2Q9Y261 457 aaPredicted RBP12.46□□□□□ -0.41
LMNA-201ENST00000347559 ZNF207O43670 478 aaKnown RBP12.46□□□□□ -0.42
LMNA-201ENST00000347559 APOHP02749 345 aaPredicted RBP12.46□□□□□ -0.42
LMNA-201ENST00000347559 PRSS57Q6UWY2 283 aa12.46□□□□□ -0.42
LMNA-201ENST00000347559 PCNX2A6NKB5 2137 aa12.46□□□□□ -0.42
LMNA-201ENST00000347559 IGHV3OR15-7A0A075B7D8 119 aa12.45□□□□□ -0.42
LMNA-201ENST00000347559 LY6G6EA0A0G2JKS1 128 aa12.45□□□□□ -0.42
LMNA-201ENST00000347559 PGPA6NDG6 321 aa12.45□□□□□ -0.42
LMNA-201ENST00000347559 MOSP00540 346 aa12.45□□□□□ -0.42
LMNA-201ENST00000347559 PRB4P10163 310 aaPredicted RBP12.45□□□□□ -0.42
LMNA-201ENST00000347559 PRDX2P32119 198 aa12.45□□□□□ -0.42
LMNA-201ENST00000347559 LINC01545Q5VT33 79 aa12.45□□□□□ -0.42
LMNA-201ENST00000347559 NPFFR1Q9GZQ6 430 aa12.45□□□□□ -0.42
LMNA-201ENST00000347559 U3KQA8 63 aa12.45□□□□□ -0.42
LMNA-201ENST00000347559 RAB30Q15771 203 aa12.45□□□□□ -0.42
LMNA-201ENST00000347559 C10orf113Q5VZT2 155 aa12.45□□□□□ -0.42
LMNA-201ENST00000347559 NEGR1Q7Z3B1 354 aa12.45□□□□□ -0.42
LMNA-201ENST00000347559 VSTM2AQ8TAG5 236 aa12.45□□□□□ -0.42
LMNA-201ENST00000347559 PPIAL4CA0A0B4J2A2 164 aa12.44□□□□□ -0.42
LMNA-201ENST00000347559 TIMM8AO60220 97 aaPredicted RBP12.44□□□□□ -0.42
LMNA-201ENST00000347559 PPIAL4GP0DN37 164 aa12.44□□□□□ -0.42
LMNA-201ENST00000347559 ZNRF1Q8ND25 227 aa12.44□□□□□ -0.42
LMNA-201ENST00000347559 ADTRPQ96IZ2 230 aa12.44□□□□□ -0.42
LMNA-201ENST00000347559 C19orf24Q9BVV8 132 aa12.44□□□□□ -0.42
LMNA-201ENST00000347559 JPT1Q9UK76 154 aa12.44□□□□□ -0.42
LMNA-201ENST00000347559 PILRBQ9UKJ0 227 aa12.44□□□□□ -0.42
LMNA-201ENST00000347559 F11RQ9Y624 299 aaKnown RBP12.44□□□□□ -0.42
LMNA-201ENST00000347559 ZNF318Q5VUA4 2279 aa12.44□□□□□ -0.42
LMNA-201ENST00000347559 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.44□□□□□ -0.42
LMNA-201ENST00000347559 TEX48A0A1B0GUV7 120 aa12.44□□□□□ -0.42
LMNA-201ENST00000347559 IL11RAQ14626 422 aa12.44□□□□□ -0.42
LMNA-201ENST00000347559 C16orf54Q6UWD8 224 aa12.44□□□□□ -0.42
LMNA-201ENST00000347559 AP5S1Q9NUS5 200 aa12.44□□□□□ -0.42
LMNA-201ENST00000347559 IQCF6A8MYZ5 107 aa12.44□□□□□ -0.42
LMNA-201ENST00000347559 LYZL6O75951 148 aa12.44□□□□□ -0.42
LMNA-201ENST00000347559 SAA2P0DJI9 122 aaPredicted RBP12.44□□□□□ -0.42
LMNA-201ENST00000347559 PRSS3P2Q8NHM4 247 aa12.44□□□□□ -0.42
LMNA-201ENST00000347559 MRPL32Q9BYC8 188 aaKnown RBP12.44□□□□□ -0.42
LMNA-201ENST00000347559 C7orf69Q9H7B7 122 aa12.44□□□□□ -0.42
LMNA-201ENST00000347559 FXYD7P58549 80 aa12.43□□□□□ -0.42
LMNA-201ENST00000347559 PPP1R32Q7Z5V6 425 aa12.43□□□□□ -0.42
LMNA-201ENST00000347559 ACP1P24666 158 aa12.43□□□□□ -0.42
LMNA-201ENST00000347559 KIR2DS2P43631 304 aa12.43□□□□□ -0.42
LMNA-201ENST00000347559 RBPMS2Q6ZRY4 209 aaKnown RBP12.43□□□□□ -0.42
LMNA-201ENST00000347559 FA2HQ7L5A8 372 aa12.43□□□□□ -0.42
LMNA-201ENST00000347559 FAM90A1Q86YD7 464 aa12.43□□□□□ -0.42
LMNA-201ENST00000347559 PDPNQ86YL7 162 aa12.43□□□□□ -0.42
LMNA-201ENST00000347559 GPR82Q96P67 336 aa12.43□□□□□ -0.42
LMNA-201ENST00000347559 B4GALT7Q9UBV7 327 aa12.43□□□□□ -0.42
LMNA-201ENST00000347559 EPDR1Q9UM22 224 aa12.43□□□□□ -0.42
LMNA-201ENST00000347559 J3QW42 95 aa12.42□□□□□ -0.42
LMNA-201ENST00000347559 BMI1P35226 326 aa12.42□□□□□ -0.42
LMNA-201ENST00000347559 NEU4Q8WWR8 484 aaPredicted RBP12.42□□□□□ -0.42
LMNA-201ENST00000347559 DDB2Q92466 427 aa12.42□□□□□ -0.42
LMNA-201ENST00000347559 ZNF747Q9BV97 191 aa12.42□□□□□ -0.42
LMNA-201ENST00000347559 TPPP3Q9BW30 176 aa12.42□□□□□ -0.42
LMNA-201ENST00000347559 CXXC4Q9H2H0 198 aa12.42□□□□□ -0.42
LMNA-201ENST00000347559 LOC389332A0A1B0GUA5 103 aa12.42□□□□□ -0.42
LMNA-201ENST00000347559 A0A1W2PPM0 123 aa12.42□□□□□ -0.42
LMNA-201ENST00000347559 A1L4Q6 167 aa12.42□□□□□ -0.42
LMNA-201ENST00000347559 ORM2P19652 201 aa12.42□□□□□ -0.42
LMNA-201ENST00000347559 NMUP48645 174 aa12.42□□□□□ -0.42
LMNA-201ENST00000347559 LOXL3P58215 753 aa12.42□□□□□ -0.42
LMNA-201ENST00000347559 SMRP1Q8NCR6 262 aa12.42□□□□□ -0.42
LMNA-201ENST00000347559 SVIPQ8NHG7 77 aa12.42□□□□□ -0.42
LMNA-201ENST00000347559 PRR7Q8TB68 274 aa12.42□□□□□ -0.42
LMNA-201ENST00000347559 DUSP23Q9BVJ7 150 aa12.42□□□□□ -0.42
LMNA-201ENST00000347559 NAV3Q8IVL0 2385 aa12.42□□□□□ -0.42
LMNA-201ENST00000347559 AGFG2O95081 481 aa12.42□□□□□ -0.42
LMNA-201ENST00000347559 PRCDQ00LT1 54 aa12.42□□□□□ -0.42
LMNA-201ENST00000347559 CD69Q07108 199 aa12.42□□□□□ -0.42
LMNA-201ENST00000347559 CT45A1Q5HYN5 189 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms