RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 SPCS3P61009 180 aa11.77□□□□□ -0.53
H3F3C-201ENST00000340398 PRSS54Q6PEW0 395 aa11.77□□□□□ -0.53
H3F3C-201ENST00000340398 Q8WTZ3 238 aa11.77□□□□□ -0.53
H3F3C-201ENST00000340398 GPR146Q96CH1 333 aa11.77□□□□□ -0.53
H3F3C-201ENST00000340398 NAA50Q9GZZ1 169 aaKnown RBP11.77□□□□□ -0.53
H3F3C-201ENST00000340398 HEYLQ9NQ87 328 aaPredicted RBP11.77□□□□□ -0.53
H3F3C-201ENST00000340398 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.77□□□□□ -0.53
H3F3C-201ENST00000340398 XCL2Q9UBD3 114 aa11.77□□□□□ -0.53
H3F3C-201ENST00000340398 EXTL2Q9UBQ6 330 aa11.77□□□□□ -0.53
H3F3C-201ENST00000340398 PKHD1P08F94 4074 aa11.76□□□□□ -0.53
H3F3C-201ENST00000340398 HELTA6NFD8 242 aa11.76□□□□□ -0.53
H3F3C-201ENST00000340398 NXPH3O95157 252 aa11.76□□□□□ -0.53
H3F3C-201ENST00000340398 CDS2O95674 445 aa11.76□□□□□ -0.53
H3F3C-201ENST00000340398 HNRNPCP07910 306 aaKnown RBP eCLIP11.76□□□□□ -0.53
H3F3C-201ENST00000340398 OR5AC1P0C628 307 aa11.76□□□□□ -0.53
H3F3C-201ENST00000340398 USF2Q15853 346 aaPredicted RBP11.76□□□□□ -0.53
H3F3C-201ENST00000340398 MZT2AQ6P582 158 aa11.76□□□□□ -0.53
H3F3C-201ENST00000340398 SELENOHQ8IZQ5 122 aaKnown RBP11.76□□□□□ -0.53
H3F3C-201ENST00000340398 CCDC71LQ8N9Z2 235 aa11.76□□□□□ -0.53
H3F3C-201ENST00000340398 GLYATL2Q8WU03 294 aa11.76□□□□□ -0.53
H3F3C-201ENST00000340398 TMEM170AQ8WVE7 144 aa11.76□□□□□ -0.53
H3F3C-201ENST00000340398 RTBDNQ9BSG5 229 aaPredicted RBP11.76□□□□□ -0.53
H3F3C-201ENST00000340398 DEFB131BA0A096LNP1 70 aa11.75□□□□□ -0.53
H3F3C-201ENST00000340398 TNFAIP8O95379 198 aa11.75□□□□□ -0.53
H3F3C-201ENST00000340398 RAB3DO95716 219 aa11.75□□□□□ -0.53
H3F3C-201ENST00000340398 OR10J1P30954 320 aa11.75□□□□□ -0.53
H3F3C-201ENST00000340398 HTR2BP41595 481 aa11.75□□□□□ -0.53
H3F3C-201ENST00000340398 MEF2DQ14814 521 aa11.75□□□□□ -0.53
H3F3C-201ENST00000340398 FAAP20Q6NZ36 180 aa11.75□□□□□ -0.53
H3F3C-201ENST00000340398 GSG1LQ6UXU4 331 aa11.75□□□□□ -0.53
H3F3C-201ENST00000340398 CENPSQ8N2Z9 138 aa11.75□□□□□ -0.53
H3F3C-201ENST00000340398 TMEM229BQ8NBD8 167 aa11.75□□□□□ -0.53
H3F3C-201ENST00000340398 OR1S2Q8NGQ3 325 aa11.75□□□□□ -0.53
H3F3C-201ENST00000340398 OR52E5Q8NH55 327 aa11.75□□□□□ -0.53
H3F3C-201ENST00000340398 NPIPB3Q92617 1050 aa11.75□□□□□ -0.53
H3F3C-201ENST00000340398 RNF126Q9BV68 326 aa11.75□□□□□ -0.53
H3F3C-201ENST00000340398 TMEM222Q9H0R3 208 aa11.75□□□□□ -0.53
H3F3C-201ENST00000340398 CACNG5Q9UF02 275 aa11.75□□□□□ -0.53
H3F3C-201ENST00000340398 TEX13DA0A0J9YY54 714 aaPredicted RBP11.74□□□□□ -0.53
H3F3C-201ENST00000340398 RPS10-NUDT3A0A1W2PQS6 291 aa11.74□□□□□ -0.53
H3F3C-201ENST00000340398 FAM90A26D6RGX4 464 aa11.74□□□□□ -0.53
H3F3C-201ENST00000340398 M0R2N4 97 aa11.74□□□□□ -0.53
H3F3C-201ENST00000340398 SCGB2A1O75556 95 aa11.74□□□□□ -0.53
H3F3C-201ENST00000340398 CD74P04233 296 aa11.74□□□□□ -0.53
H3F3C-201ENST00000340398 EIF2B2P49770 351 aaKnown RBP11.74□□□□□ -0.53
H3F3C-201ENST00000340398 DEFB1P60022 68 aa11.74□□□□□ -0.53
H3F3C-201ENST00000340398 YPEL3P61236 119 aaPredicted RBP11.74□□□□□ -0.53
H3F3C-201ENST00000340398 AARDQ4LEZ3 155 aa11.74□□□□□ -0.53
H3F3C-201ENST00000340398 C2orf83Q53S99 150 aa11.74□□□□□ -0.53
H3F3C-201ENST00000340398 STEAP1BQ6NZ63 245 aa11.74□□□□□ -0.53
H3F3C-201ENST00000340398 CEBPZOSA8MTT3 80 aa11.73□□□□□ -0.53
H3F3C-201ENST00000340398 H3BMM0 161 aa11.73□□□□□ -0.53
H3F3C-201ENST00000340398 IL4P05112 153 aa11.73□□□□□ -0.53
H3F3C-201ENST00000340398 TBPP20226 339 aa11.73□□□□□ -0.53
H3F3C-201ENST00000340398 AP2S1P53680 142 aaPredicted RBP11.73□□□□□ -0.53
H3F3C-201ENST00000340398 ACY3Q96HD9 319 aa11.73□□□□□ -0.53
H3F3C-201ENST00000340398 PKD1P98161 4303 aa11.72□□□□□ -0.53
H3F3C-201ENST00000340398 A0A1B0GVY2 172 aa11.72□□□□□ -0.53
H3F3C-201ENST00000340398 BUB3O43684 328 aa11.72□□□□□ -0.53
H3F3C-201ENST00000340398 IGKV3-20P01619 116 aa11.72□□□□□ -0.53
H3F3C-201ENST00000340398 RD3LP0DJH9 198 aa11.72□□□□□ -0.53
H3F3C-201ENST00000340398 SLC25A4P12235 298 aa11.72□□□□□ -0.53
H3F3C-201ENST00000340398 ZNF182P17025 639 aaPredicted RBP11.72□□□□□ -0.53
H3F3C-201ENST00000340398 FXYD7P58549 80 aa11.72□□□□□ -0.53
H3F3C-201ENST00000340398 TAS2R19P59542 299 aa11.72□□□□□ -0.53
H3F3C-201ENST00000340398 CTF1Q16619 201 aa11.72□□□□□ -0.53
H3F3C-201ENST00000340398 GDF5OSQ5U4N7 250 aa11.72□□□□□ -0.53
H3F3C-201ENST00000340398 FAM219AQ8IW50 185 aa11.72□□□□□ -0.53
H3F3C-201ENST00000340398 SLC24A4Q8NFF2 622 aa11.72□□□□□ -0.53
H3F3C-201ENST00000340398 RNASEH2CQ8TDP1 164 aaKnown RBP11.72□□□□□ -0.53
H3F3C-201ENST00000340398 RBPMSQ93062 196 aaKnown RBP11.72□□□□□ -0.53
H3F3C-201ENST00000340398 MIXL1Q9H2W2 232 aa11.72□□□□□ -0.53
H3F3C-201ENST00000340398 NAA60Q9H7X0 242 aa11.72□□□□□ -0.53
H3F3C-201ENST00000340398 PRR13Q9NZ81 148 aa11.72□□□□□ -0.53
H3F3C-201ENST00000340398 PLA2G2EQ9NZK7 142 aa11.72□□□□□ -0.53
H3F3C-201ENST00000340398 PSG1P11464 419 aa11.71□□□□□ -0.53
H3F3C-201ENST00000340398 EMP1P54849 157 aa11.71□□□□□ -0.53
H3F3C-201ENST00000340398 SNRPD3P62318 126 aaKnown RBP11.71□□□□□ -0.53
H3F3C-201ENST00000340398 TMEM268Q5VZI3 342 aa11.71□□□□□ -0.53
H3F3C-201ENST00000340398 SIGLEC15Q6ZMC9 328 aa11.71□□□□□ -0.53
H3F3C-201ENST00000340398 LINC00336Q6ZUF6 198 aa11.71□□□□□ -0.53
H3F3C-201ENST00000340398 POM121L12Q8N7R1 296 aa11.71□□□□□ -0.53
H3F3C-201ENST00000340398 OR51G1Q8NGK1 321 aa11.71□□□□□ -0.53
H3F3C-201ENST00000340398 NRN1Q9NPD7 142 aa11.71□□□□□ -0.53
H3F3C-201ENST00000340398 C14orf166Q9Y224 244 aaKnown RBP11.71□□□□□ -0.53
H3F3C-201ENST00000340398 RTL8CO15255 209 aa11.7□□□□□ -0.54
H3F3C-201ENST00000340398 B3GALNT1O75752 331 aa11.7□□□□□ -0.54
H3F3C-201ENST00000340398 TOMM40O96008 361 aa11.7□□□□□ -0.54
H3F3C-201ENST00000340398 AMBPP02760 352 aa11.7□□□□□ -0.54
H3F3C-201ENST00000340398 NPY1RP25929 384 aa11.7□□□□□ -0.54
H3F3C-201ENST00000340398 NUTF2P61970 127 aaKnown RBP11.7□□□□□ -0.54
H3F3C-201ENST00000340398 AP3S1Q92572 193 aa11.7□□□□□ -0.54
H3F3C-201ENST00000340398 GPR132Q9UNW8 380 aa11.7□□□□□ -0.54
H3F3C-201ENST00000340398 DYNC1H1Q14204 4646 aaKnown RBP11.69□□□□□ -0.54
H3F3C-201ENST00000340398 IGHV3OR16-12A0A075B7B8 117 aa11.69□□□□□ -0.54
H3F3C-201ENST00000340398 GABARAPH6UMI1 98 aa11.69□□□□□ -0.54
H3F3C-201ENST00000340398 CTDSP2O14595 271 aa11.69□□□□□ -0.54
H3F3C-201ENST00000340398 GABARAPO95166 117 aa11.69□□□□□ -0.54
H3F3C-201ENST00000340398 GPR107Q5VW38 600 aa11.69□□□□□ -0.54
H3F3C-201ENST00000340398 NDUFAF3Q9BU61 184 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms