RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 ZNF883P0CG24 379 aa16.51■□□□□ 0.23
RUNX3-202ENST00000338888 CD69Q07108 199 aa16.51■□□□□ 0.23
RUNX3-202ENST00000338888 C7orf71A4D174 169 aa16.51■□□□□ 0.23
RUNX3-202ENST00000338888 SRRM4A7MD48 611 aaKnown RBP16.51■□□□□ 0.23
RUNX3-202ENST00000338888 COX7A2P2O60397 106 aa16.51■□□□□ 0.23
RUNX3-202ENST00000338888 PLAUP00749 431 aa16.51■□□□□ 0.23
RUNX3-202ENST00000338888 RNASE2P10153 161 aaKnown RBP16.51■□□□□ 0.23
RUNX3-202ENST00000338888 CD59P13987 128 aa16.51■□□□□ 0.23
RUNX3-202ENST00000338888 MEOX1P50221 254 aa16.51■□□□□ 0.23
RUNX3-202ENST00000338888 C2orf83Q53S99 150 aa16.51■□□□□ 0.23
RUNX3-202ENST00000338888 UPK2O00526 184 aa16.5■□□□□ 0.23
RUNX3-202ENST00000338888 CD46P15529 392 aa16.5■□□□□ 0.23
RUNX3-202ENST00000338888 PLA2G2CQ5R387 149 aa16.5■□□□□ 0.23
RUNX3-202ENST00000338888 GTSF1Q8WW33 167 aa16.5■□□□□ 0.23
RUNX3-202ENST00000338888 SMIM12Q96EX1 92 aa16.5■□□□□ 0.23
RUNX3-202ENST00000338888 GAGE10A6NGK3 116 aa16.5■□□□□ 0.23
RUNX3-202ENST00000338888 PPIAL4DF5H284 164 aa16.5■□□□□ 0.23
RUNX3-202ENST00000338888 IGHV3-48P01763 117 aa16.5■□□□□ 0.23
RUNX3-202ENST00000338888 IGKV1-16P04430 117 aa16.5■□□□□ 0.23
RUNX3-202ENST00000338888 HLA-DRB1P01911 266 aa16.49■□□□□ 0.23
RUNX3-202ENST00000338888 APOA2P02652 100 aa16.49■□□□□ 0.23
RUNX3-202ENST00000338888 LIPFP07098 398 aa16.49■□□□□ 0.23
RUNX3-202ENST00000338888 CR1LQ2VPA4 569 aa16.49■□□□□ 0.23
RUNX3-202ENST00000338888 HES3Q5TGS1 186 aa16.49■□□□□ 0.23
RUNX3-202ENST00000338888 C10orf113Q5VZT2 155 aa16.49■□□□□ 0.23
RUNX3-202ENST00000338888 VWA1Q6PCB0 445 aa16.49■□□□□ 0.23
RUNX3-202ENST00000338888 ZNF257Q9Y2Q1 563 aa16.49■□□□□ 0.23
RUNX3-202ENST00000338888 PET117Q6UWS5 81 aa16.49■□□□□ 0.23
RUNX3-202ENST00000338888 PATE2Q6UY27 113 aa16.49■□□□□ 0.23
RUNX3-202ENST00000338888 OR2Z1Q8NG97 314 aa16.49■□□□□ 0.23
RUNX3-202ENST00000338888 RPP21Q9H633 154 aaKnown RBP16.49■□□□□ 0.23
RUNX3-202ENST00000338888 FNDC4Q9H6D8 234 aaPredicted RBP16.49■□□□□ 0.23
RUNX3-202ENST00000338888 FAM231BA6NCW3 169 aa16.49■□□□□ 0.23
RUNX3-202ENST00000338888 PPP1R35Q8TAP8 253 aa16.49■□□□□ 0.23
RUNX3-202ENST00000338888 MS4A6AQ9H2W1 248 aa16.49■□□□□ 0.23
RUNX3-202ENST00000338888 SLC25A5P05141 298 aaKnown RBP16.48■□□□□ 0.23
RUNX3-202ENST00000338888 CSN3P07498 182 aa16.48■□□□□ 0.23
RUNX3-202ENST00000338888 UQCRFS1P47985 274 aa16.48■□□□□ 0.23
RUNX3-202ENST00000338888 ARF6P62330 175 aa16.48■□□□□ 0.23
RUNX3-202ENST00000338888 C17orf58Q2M2W7 97 aa16.48■□□□□ 0.23
RUNX3-202ENST00000338888 LHFPL4Q7Z7J7 247 aa16.48■□□□□ 0.23
RUNX3-202ENST00000338888 BLNKQ8WV28 456 aa16.48■□□□□ 0.23
RUNX3-202ENST00000338888 H1FXQ92522 213 aaKnown RBP16.48■□□□□ 0.23
RUNX3-202ENST00000338888 FXYD5Q96DB9 178 aa16.48■□□□□ 0.23
RUNX3-202ENST00000338888 INO80CQ6PI98 192 aaPredicted RBP16.48■□□□□ 0.23
RUNX3-202ENST00000338888 C2orf91Q6ZV80 131 aa16.48■□□□□ 0.23
RUNX3-202ENST00000338888 ABI3Q9P2A4 366 aa16.48■□□□□ 0.23
RUNX3-202ENST00000338888 EPDR1Q9UM22 224 aa16.48■□□□□ 0.23
RUNX3-202ENST00000338888 EP300Q09472 2414 aaPredicted RBP16.47■□□□□ 0.23
RUNX3-202ENST00000338888 MOSP00540 346 aa16.47■□□□□ 0.23
RUNX3-202ENST00000338888 POU2AF1Q16633 256 aa16.47■□□□□ 0.23
RUNX3-202ENST00000338888 DHRS13Q6UX07 377 aa16.47■□□□□ 0.23
RUNX3-202ENST00000338888 FER1L6-AS1Q8NA97 138 aa16.47■□□□□ 0.23
RUNX3-202ENST00000338888 SPRR3Q9UBC9 169 aa16.47■□□□□ 0.23
RUNX3-202ENST00000338888 PCNX2A6NKB5 2137 aa16.47■□□□□ 0.23
RUNX3-202ENST00000338888 A8MWL6 223 aa16.47■□□□□ 0.23
RUNX3-202ENST00000338888 OR1L8Q8NGR8 309 aa16.47■□□□□ 0.23
RUNX3-202ENST00000338888 ZNF714Q96N38 554 aa16.47■□□□□ 0.23
RUNX3-202ENST00000338888 TMUB1Q9BVT8 246 aa16.47■□□□□ 0.23
RUNX3-202ENST00000338888 PGPA6NDG6 321 aa16.46■□□□□ 0.23
RUNX3-202ENST00000338888 OR5AL1P0C617 328 aa16.46■□□□□ 0.23
RUNX3-202ENST00000338888 HTR1DP28221 377 aa16.46■□□□□ 0.23
RUNX3-202ENST00000338888 BPIFA4PQ86YQ2 179 aa16.46■□□□□ 0.23
RUNX3-202ENST00000338888 WFDC8Q8IUA0 241 aa16.46■□□□□ 0.23
RUNX3-202ENST00000338888 ZNRD1Q9P1U0 126 aa16.46■□□□□ 0.23
RUNX3-202ENST00000338888 A0A1W2PNU3 283 aaPredicted RBP16.46■□□□□ 0.22
RUNX3-202ENST00000338888 SRRM5B3KS81 715 aa16.46■□□□□ 0.22
RUNX3-202ENST00000338888 CHEK1O14757 476 aa16.46■□□□□ 0.22
RUNX3-202ENST00000338888 P01737 135 aa16.46■□□□□ 0.22
RUNX3-202ENST00000338888 OR1B1Q8NGR6 318 aa16.46■□□□□ 0.22
RUNX3-202ENST00000338888 GPR82Q96P67 336 aa16.46■□□□□ 0.22
RUNX3-202ENST00000338888 MED13Q9UHV7 2174 aa16.45■□□□□ 0.22
RUNX3-202ENST00000338888 C9orf172C9J069 976 aa16.45■□□□□ 0.22
RUNX3-202ENST00000338888 COX8AP10176 69 aa16.45■□□□□ 0.22
RUNX3-202ENST00000338888 TMEM177Q53S58 311 aa16.45■□□□□ 0.22
RUNX3-202ENST00000338888 GCSAMQ8N6F7 178 aa16.45■□□□□ 0.22
RUNX3-202ENST00000338888 NAA38Q9BRA0 125 aaKnown RBP16.45■□□□□ 0.22
RUNX3-202ENST00000338888 CGB3P0DN86 165 aa16.45■□□□□ 0.22
RUNX3-202ENST00000338888 CGB7P0DN87 165 aa16.45■□□□□ 0.22
RUNX3-202ENST00000338888 SPRNQ5BIV9 151 aa16.45■□□□□ 0.22
RUNX3-202ENST00000338888 TMEM97Q5BJF2 176 aa16.45■□□□□ 0.22
RUNX3-202ENST00000338888 FAM201AQ5SY85 155 aa16.45■□□□□ 0.22
RUNX3-202ENST00000338888 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.45■□□□□ 0.22
RUNX3-202ENST00000338888 NPIPB3Q92617 1050 aa16.45■□□□□ 0.22
RUNX3-202ENST00000338888 ADTRPQ96IZ2 230 aa16.45■□□□□ 0.22
RUNX3-202ENST00000338888 HSPB8Q9UJY1 196 aa16.45■□□□□ 0.22
RUNX3-202ENST00000338888 SAA1P0DJI8 122 aaPredicted RBP16.44■□□□□ 0.22
RUNX3-202ENST00000338888 PDPNQ86YL7 162 aa16.44■□□□□ 0.22
RUNX3-202ENST00000338888 PRSS22Q9GZN4 317 aa16.44■□□□□ 0.22
RUNX3-202ENST00000338888 PRRC2CQ9Y520 2896 aaKnown RBP16.44■□□□□ 0.22
RUNX3-202ENST00000338888 DLL1O00548 723 aa16.44■□□□□ 0.22
RUNX3-202ENST00000338888 MYCNOSP40205 109 aa16.44■□□□□ 0.22
RUNX3-202ENST00000338888 LINC00305Q7Z4B0 112 aa16.44■□□□□ 0.22
RUNX3-202ENST00000338888 TEX45Q8NA69 505 aa16.44■□□□□ 0.22
RUNX3-202ENST00000338888 OR1L4Q8NGR5 311 aa16.44■□□□□ 0.22
RUNX3-202ENST00000338888 RND1Q92730 232 aa16.44■□□□□ 0.22
RUNX3-202ENST00000338888 NDFIP1Q9BT67 221 aa16.44■□□□□ 0.22
RUNX3-202ENST00000338888 MLST8Q9BVC4 326 aa16.44■□□□□ 0.22
RUNX3-202ENST00000338888 CECR9P0C854 216 aa16.43■□□□□ 0.22
RUNX3-202ENST00000338888 CT45A6P0DMU7 189 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms