RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 HILPDAQ9Y5L2 63 aa10.23□□□□□ -0.77
DDX39A-202ENST00000324340 PXMP4Q9Y6I8 212 aa10.23□□□□□ -0.77
DDX39A-202ENST00000324340 PRRC2AP48634 2157 aaKnown RBP10.22□□□□□ -0.77
DDX39A-202ENST00000324340 IGHV3-72A0A0B4J1Y9 119 aa10.22□□□□□ -0.77
DDX39A-202ENST00000324340 TRAV40A0A0B4J280 105 aa10.22□□□□□ -0.77
DDX39A-202ENST00000324340 TGFAP01135 160 aa10.22□□□□□ -0.77
DDX39A-202ENST00000324340 AVPP01185 164 aa10.22□□□□□ -0.77
DDX39A-202ENST00000324340 SAA1P0DJI8 122 aaPredicted RBP10.22□□□□□ -0.77
DDX39A-202ENST00000324340 YPEL3P61236 119 aaPredicted RBP10.22□□□□□ -0.77
DDX39A-202ENST00000324340 MEF2BQ02080 365 aaPredicted RBP10.22□□□□□ -0.77
DDX39A-202ENST00000324340 EBI3Q14213 229 aa10.22□□□□□ -0.77
DDX39A-202ENST00000324340 ADIRFQ15847 76 aa10.22□□□□□ -0.77
DDX39A-202ENST00000324340 SMIM15Q7Z3B0 74 aa10.22□□□□□ -0.77
DDX39A-202ENST00000324340 TMEM144Q7Z5S9 345 aa10.22□□□□□ -0.77
DDX39A-202ENST00000324340 OR52E5Q8NH55 327 aa10.22□□□□□ -0.77
DDX39A-202ENST00000324340 OR4A5Q8NH83 315 aa10.22□□□□□ -0.77
DDX39A-202ENST00000324340 VSTM2AQ8TAG5 236 aa10.22□□□□□ -0.77
DDX39A-202ENST00000324340 SLC35E1Q96K37 410 aa10.22□□□□□ -0.77
DDX39A-202ENST00000324340 DNAJC4Q9NNZ3 241 aa10.22□□□□□ -0.77
DDX39A-202ENST00000324340 PDZD2O15018 2839 aa10.22□□□□□ -0.77
DDX39A-202ENST00000324340 CEBPZOSA8MTT3 80 aa10.21□□□□□ -0.78
DDX39A-202ENST00000324340 ZNF705FA8MVS1 300 aaPredicted RBP10.21□□□□□ -0.78
DDX39A-202ENST00000324340 F6UZH7 168 aa10.21□□□□□ -0.78
DDX39A-202ENST00000324340 UPK2O00526 184 aa10.21□□□□□ -0.78
DDX39A-202ENST00000324340 SOX15O60248 233 aa10.21□□□□□ -0.78
DDX39A-202ENST00000324340 ZNF705DP0CH99 300 aaPredicted RBP10.21□□□□□ -0.78
DDX39A-202ENST00000324340 ZNF705BP0CI00 300 aaPredicted RBP10.21□□□□□ -0.78
DDX39A-202ENST00000324340 PSMB3P49720 205 aa10.21□□□□□ -0.78
DDX39A-202ENST00000324340 BPIFB3P59826 476 aa10.21□□□□□ -0.78
DDX39A-202ENST00000324340 RPS16P62249 146 aaKnown RBP10.21□□□□□ -0.78
DDX39A-202ENST00000324340 OR5I1Q13606 314 aa10.21□□□□□ -0.78
DDX39A-202ENST00000324340 KLF17Q5JT82 389 aaPredicted RBP10.21□□□□□ -0.78
DDX39A-202ENST00000324340 TMEM37Q8WXS4 190 aa10.21□□□□□ -0.78
DDX39A-202ENST00000324340 RITA1Q96K30 269 aa10.21□□□□□ -0.78
DDX39A-202ENST00000324340 TXNDC17Q9BRA2 123 aa10.21□□□□□ -0.78
DDX39A-202ENST00000324340 VAMP8Q9BV40 100 aa10.21□□□□□ -0.78
DDX39A-202ENST00000324340 RPRMQ9NS64 109 aa10.21□□□□□ -0.78
DDX39A-202ENST00000324340 TMEM14BQ9NUH8 114 aa10.21□□□□□ -0.78
DDX39A-202ENST00000324340 SLC45A2Q9UMX9 530 aa10.21□□□□□ -0.78
DDX39A-202ENST00000324340 FOXA2Q9Y261 457 aaPredicted RBP10.21□□□□□ -0.78
DDX39A-202ENST00000324340 CHTOPQ9Y3Y2 248 aaKnown RBP10.21□□□□□ -0.78
DDX39A-202ENST00000324340 CENPEQ02224 2701 aa10.21□□□□□ -0.78
DDX39A-202ENST00000324340 POLQO75417 2590 aa10.21□□□□□ -0.78
DDX39A-202ENST00000324340 ABCA12Q86UK0 2595 aa10.21□□□□□ -0.78
DDX39A-202ENST00000324340 CSMD2Q7Z408 3487 aa10.2□□□□□ -0.78
DDX39A-202ENST00000324340 TRAV3A0A0B4J244 114 aa10.2□□□□□ -0.78
DDX39A-202ENST00000324340 C15orf61A6NNL5 157 aa10.2□□□□□ -0.78
DDX39A-202ENST00000324340 SYNGR2O43760 224 aa10.2□□□□□ -0.78
DDX39A-202ENST00000324340 FSHBP01225 129 aa10.2□□□□□ -0.78
DDX39A-202ENST00000324340 REG1AP05451 166 aa10.2□□□□□ -0.78
DDX39A-202ENST00000324340 CRYGBP07316 175 aa10.2□□□□□ -0.78
DDX39A-202ENST00000324340 IGHV4-38-2P0DP08 117 aa10.2□□□□□ -0.78
DDX39A-202ENST00000324340 HBG1P69891 147 aa10.2□□□□□ -0.78
DDX39A-202ENST00000324340 HBG2P69892 147 aa10.2□□□□□ -0.78
DDX39A-202ENST00000324340 LRRC75BQ2VPJ9 315 aa10.2□□□□□ -0.78
DDX39A-202ENST00000324340 CIARTQ8N365 385 aaPredicted RBP10.2□□□□□ -0.78
DDX39A-202ENST00000324340 TEX45Q8NA69 505 aa10.2□□□□□ -0.78
DDX39A-202ENST00000324340 OR4A16Q8NH70 328 aa10.2□□□□□ -0.78
DDX39A-202ENST00000324340 TMEM167AQ8TBQ9 72 aa10.2□□□□□ -0.78
DDX39A-202ENST00000324340 QTRT1Q9BXR0 403 aaKnown RBP10.2□□□□□ -0.78
DDX39A-202ENST00000324340 CDC42EP3Q9UKI2 254 aa10.2□□□□□ -0.78
DDX39A-202ENST00000324340 PRNDQ9UKY0 176 aa10.2□□□□□ -0.78
DDX39A-202ENST00000324340 ZNF257Q9Y2Q1 563 aa10.2□□□□□ -0.78
DDX39A-202ENST00000324340 ZFP92A6NM28 416 aa10.19□□□□□ -0.78
DDX39A-202ENST00000324340 TCF21O43680 179 aa10.19□□□□□ -0.78
DDX39A-202ENST00000324340 CHST1O43916 411 aa10.19□□□□□ -0.78
DDX39A-202ENST00000324340 SSSCA1O60232 199 aa10.19□□□□□ -0.78
DDX39A-202ENST00000324340 MOSP00540 346 aa10.19□□□□□ -0.78
DDX39A-202ENST00000324340 PAX9P55771 341 aa10.19□□□□□ -0.78
DDX39A-202ENST00000324340 VMA21Q3ZAQ7 101 aa10.19□□□□□ -0.78
DDX39A-202ENST00000324340 COX19Q49B96 90 aa10.19□□□□□ -0.78
DDX39A-202ENST00000324340 RUSC1-AS1Q66K80 236 aa10.19□□□□□ -0.78
DDX39A-202ENST00000324340 SLC25A24Q6NUK1 477 aa10.19□□□□□ -0.78
DDX39A-202ENST00000324340 TOMM20LQ6UXN7 152 aa10.19□□□□□ -0.78
DDX39A-202ENST00000324340 Q8N6K4 173 aa10.19□□□□□ -0.78
DDX39A-202ENST00000324340 NPBQ8NG41 125 aa10.19□□□□□ -0.78
DDX39A-202ENST00000324340 CMTM2Q8TAZ6 248 aa10.19□□□□□ -0.78
DDX39A-202ENST00000324340 RNF2Q99496 336 aa10.19□□□□□ -0.78
DDX39A-202ENST00000324340 MEGF9Q9H1U4 602 aa10.19□□□□□ -0.78
DDX39A-202ENST00000324340 UQCR10Q9UDW1 63 aa10.19□□□□□ -0.78
DDX39A-202ENST00000324340 TRAPPC1Q9Y5R8 145 aa10.19□□□□□ -0.78
DDX39A-202ENST00000324340 MED13LQ71F56 2210 aa10.19□□□□□ -0.78
DDX39A-202ENST00000324340 TRBV9A0A0B4J1U6 114 aa10.18□□□□□ -0.78
DDX39A-202ENST00000324340 NXPH3O95157 252 aa10.18□□□□□ -0.78
DDX39A-202ENST00000324340 TMEM50AO95807 157 aa10.18□□□□□ -0.78
DDX39A-202ENST00000324340 IGKV1D-33P01593 117 aa10.18□□□□□ -0.78
DDX39A-202ENST00000324340 IGKV1-33P01594 117 aa10.18□□□□□ -0.78
DDX39A-202ENST00000324340 Q0VG73 95 aa10.18□□□□□ -0.78
DDX39A-202ENST00000324340 UBE2V1Q13404 147 aa10.18□□□□□ -0.78
DDX39A-202ENST00000324340 PSG5Q15238 335 aa10.18□□□□□ -0.78
DDX39A-202ENST00000324340 ATP6V1FQ16864 119 aa10.18□□□□□ -0.78
DDX39A-202ENST00000324340 MRGPRG-AS1Q2M3A8 158 aa10.18□□□□□ -0.78
DDX39A-202ENST00000324340 LINC01551Q86U37 167 aa10.18□□□□□ -0.78
DDX39A-202ENST00000324340 KLHDC1Q8N7A1 406 aa10.18□□□□□ -0.78
DDX39A-202ENST00000324340 OR5B3Q8NH48 314 aa10.18□□□□□ -0.78
DDX39A-202ENST00000324340 EAF1Q96JC9 268 aaPredicted RBP10.18□□□□□ -0.78
DDX39A-202ENST00000324340 MRPS16Q9Y3D3 137 aaKnown RBP10.18□□□□□ -0.78
DDX39A-202ENST00000324340 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.18□□□□□ -0.782e-7■■■■■ 33
DDX39A-202ENST00000324340 WNK2Q9Y3S1 2297 aa10.18□□□□□ -0.78
DDX39A-202ENST00000324340 UNC79Q9P2D8 2635 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms