RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 TPTE2P1Q5T6R2 138 aa12.75□□□□□ -0.37
SHISA2-201ENST00000319420 FAM71F2Q6NXP2 309 aa12.75□□□□□ -0.37
SHISA2-201ENST00000319420 MMD2Q8IY49 270 aa12.75□□□□□ -0.37
SHISA2-201ENST00000319420 TMEM37Q8WXS4 190 aa12.75□□□□□ -0.37
SHISA2-201ENST00000319420 A1L4Q6 167 aa12.74□□□□□ -0.37
SHISA2-201ENST00000319420 IFITM10A6NMD0 228 aa12.74□□□□□ -0.37
SHISA2-201ENST00000319420 HIST1H2BKO60814 126 aa12.74□□□□□ -0.37
SHISA2-201ENST00000319420 VENTXO95231 258 aa12.74□□□□□ -0.37
SHISA2-201ENST00000319420 CXorf1O96002 111 aa12.74□□□□□ -0.37
SHISA2-201ENST00000319420 HIST1H2BJP06899 126 aa12.74□□□□□ -0.37
SHISA2-201ENST00000319420 HIST1H2BOP23527 126 aa12.74□□□□□ -0.37
SHISA2-201ENST00000319420 GCHFRP30047 84 aa12.74□□□□□ -0.37
SHISA2-201ENST00000319420 HIST1H2BBP33778 126 aa12.74□□□□□ -0.37
SHISA2-201ENST00000319420 HIST1H2BDP58876 126 aa12.74□□□□□ -0.37
SHISA2-201ENST00000319420 HIST1H2BCP62807 126 aa12.74□□□□□ -0.37
SHISA2-201ENST00000319420 HIST2H2BEQ16778 126 aa12.74□□□□□ -0.37
SHISA2-201ENST00000319420 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.74□□□□□ -0.37
SHISA2-201ENST00000319420 LY6G5BQ8NDX9 201 aa12.74□□□□□ -0.37
SHISA2-201ENST00000319420 SRSF12Q8WXF0 261 aaKnown RBP12.74□□□□□ -0.37
SHISA2-201ENST00000319420 HIST1H2BHQ93079 126 aa12.74□□□□□ -0.37
SHISA2-201ENST00000319420 HIST1H2BNQ99877 126 aa12.74□□□□□ -0.37
SHISA2-201ENST00000319420 HIST1H2BMQ99879 126 aa12.74□□□□□ -0.37
SHISA2-201ENST00000319420 AMMECR1Q9Y4X0 333 aaPredicted RBP12.74□□□□□ -0.37
SHISA2-201ENST00000319420 TRBV20OR9-2A0A075B6H5 130 aa12.74□□□□□ -0.37
SHISA2-201ENST00000319420 SUB1P53999 127 aaKnown RBP eCLIP12.74□□□□□ -0.37
SHISA2-201ENST00000319420 FRZBQ92765 325 aa12.74□□□□□ -0.37
SHISA2-201ENST00000319420 TNFRSF14Q92956 283 aa12.74□□□□□ -0.37
SHISA2-201ENST00000319420 H3BTX0 84 aa12.73□□□□□ -0.37
SHISA2-201ENST00000319420 PFN1P07737 140 aaKnown RBP12.73□□□□□ -0.37
SHISA2-201ENST00000319420 EFNA4P52798 201 aa12.73□□□□□ -0.37
SHISA2-201ENST00000319420 GFI1BQ5VTD9 330 aa12.73□□□□□ -0.37
SHISA2-201ENST00000319420 ASPHD1Q5U4P2 390 aa12.73□□□□□ -0.37
SHISA2-201ENST00000319420 TLN2Q9Y4G6 2542 aa12.73□□□□□ -0.37
SHISA2-201ENST00000319420 TMEM249Q2WGJ8 235 aa12.72□□□□□ -0.37
SHISA2-201ENST00000319420 LEMD1Q68G75 181 aa12.72□□□□□ -0.37
SHISA2-201ENST00000319420 KIR3DL3Q8N743 410 aa12.72□□□□□ -0.37
SHISA2-201ENST00000319420 OR4X1Q8NH49 305 aa12.72□□□□□ -0.37
SHISA2-201ENST00000319420 C8orf46Q8TAG6 207 aa12.72□□□□□ -0.37
SHISA2-201ENST00000319420 SH2D7A6NKC9 451 aaPredicted RBP12.72□□□□□ -0.37
SHISA2-201ENST00000319420 TRGC1P0CF51 173 aa12.72□□□□□ -0.37
SHISA2-201ENST00000319420 PYYP10082 97 aa12.72□□□□□ -0.37
SHISA2-201ENST00000319420 PRTN3P24158 256 aa12.72□□□□□ -0.37
SHISA2-201ENST00000319420 COMPP49747 757 aaPredicted RBP12.72□□□□□ -0.37
SHISA2-201ENST00000319420 LINC01551Q86U37 167 aa12.72□□□□□ -0.37
SHISA2-201ENST00000319420 OR1B1Q8NGR6 318 aa12.72□□□□□ -0.37
SHISA2-201ENST00000319420 BBC3Q96PG8 261 aaPredicted RBP12.72□□□□□ -0.37
SHISA2-201ENST00000319420 CTDSP1Q9GZU7 261 aa12.72□□□□□ -0.37
SHISA2-201ENST00000319420 KCNIP2Q9NS61 270 aa12.72□□□□□ -0.37
SHISA2-201ENST00000319420 H7BYZ3 331 aa12.71□□□□□ -0.37
SHISA2-201ENST00000319420 MT-CO2P00403 227 aa12.71□□□□□ -0.37
SHISA2-201ENST00000319420 GALR1P47211 349 aa12.71□□□□□ -0.37
SHISA2-201ENST00000319420 TEX45Q8NA69 505 aa12.71□□□□□ -0.37
SHISA2-201ENST00000319420 OR4A5Q8NH83 315 aa12.71□□□□□ -0.37
SHISA2-201ENST00000319420 NAV2Q8IVL1 2488 aa12.71□□□□□ -0.37
SHISA2-201ENST00000319420 COX7A2P2O60397 106 aa12.71□□□□□ -0.37
SHISA2-201ENST00000319420 IGHV4-39P01824 125 aa12.71□□□□□ -0.37
SHISA2-201ENST00000319420 HIST1H1BP16401 226 aaKnown RBP12.71□□□□□ -0.37
SHISA2-201ENST00000319420 TMEM11P17152 192 aa12.71□□□□□ -0.37
SHISA2-201ENST00000319420 PDZD11Q5EBL8 140 aa12.71□□□□□ -0.37
SHISA2-201ENST00000319420 EAF1Q96JC9 268 aaPredicted RBP12.71□□□□□ -0.37
SHISA2-201ENST00000319420 LY6LH3BQJ8 138 aa12.71□□□□□ -0.38
SHISA2-201ENST00000319420 PDE6DO43924 150 aa12.71□□□□□ -0.38
SHISA2-201ENST00000319420 ZNF503Q96F45 646 aa12.71□□□□□ -0.38
SHISA2-201ENST00000319420 FUT9Q9Y231 359 aa12.71□□□□□ -0.38
SHISA2-201ENST00000319420 TRBV24-1A0A075B6N3 115 aa12.7□□□□□ -0.38
SHISA2-201ENST00000319420 PHOX2AO14813 284 aa12.7□□□□□ -0.38
SHISA2-201ENST00000319420 TOX4O94842 621 aa12.7□□□□□ -0.38
SHISA2-201ENST00000319420 FAM3BP58499 235 aaPredicted RBP12.7□□□□□ -0.38
SHISA2-201ENST00000319420 TNFRSF19Q9NS68 423 aa12.7□□□□□ -0.38
SHISA2-201ENST00000319420 ANKRD17O75179 2603 aaKnown RBP12.7□□□□□ -0.38
SHISA2-201ENST00000319420 HOXA5P20719 270 aa12.7□□□□□ -0.38
SHISA2-201ENST00000319420 SUMO1P63165 101 aaKnown RBP12.7□□□□□ -0.38
SHISA2-201ENST00000319420 OR5AU1Q8NGC0 362 aa12.7□□□□□ -0.38
SHISA2-201ENST00000319420 PERPQ96FX8 193 aa12.7□□□□□ -0.38
SHISA2-201ENST00000319420 CCDC168Q8NDH2 2452 aa12.69□□□□□ -0.38
SHISA2-201ENST00000319420 FBN2P35556 2912 aa12.69□□□□□ -0.38
SHISA2-201ENST00000319420 A0A1W2PPQ1 181 aa12.69□□□□□ -0.38
SHISA2-201ENST00000319420 EREGO14944 169 aa12.69□□□□□ -0.38
SHISA2-201ENST00000319420 IGHV3-23P01764 117 aa12.69□□□□□ -0.38
SHISA2-201ENST00000319420 RBP4P02753 201 aa12.69□□□□□ -0.38
SHISA2-201ENST00000319420 CEACAM3P40198 252 aa12.69□□□□□ -0.38
SHISA2-201ENST00000319420 FXYD3Q14802 87 aa12.69□□□□□ -0.38
SHISA2-201ENST00000319420 BLNKQ8WV28 456 aa12.69□□□□□ -0.38
SHISA2-201ENST00000319420 SGK494Q96LW2 274 aa12.69□□□□□ -0.38
SHISA2-201ENST00000319420 WNT10AQ9GZT5 417 aa12.69□□□□□ -0.38
SHISA2-201ENST00000319420 ABCA2Q9BZC7 2435 aa12.69□□□□□ -0.38
SHISA2-201ENST00000319420 TEX22C9J3V5 150 aa12.69□□□□□ -0.38
SHISA2-201ENST00000319420 NBR2O15453 112 aa12.69□□□□□ -0.38
SHISA2-201ENST00000319420 HOXB4P17483 251 aaPredicted RBP12.69□□□□□ -0.38
SHISA2-201ENST00000319420 CRYBB3P26998 211 aa12.69□□□□□ -0.38
SHISA2-201ENST00000319420 OR11H6Q8NGC7 330 aa12.69□□□□□ -0.38
SHISA2-201ENST00000319420 CCL19Q99731 98 aa12.69□□□□□ -0.38
SHISA2-201ENST00000319420 ZNF355PQ9NSJ1 428 aa12.69□□□□□ -0.38
SHISA2-201ENST00000319420 RPH3ALQ9UNE2 315 aa12.69□□□□□ -0.38
SHISA2-201ENST00000319420 IGKV1D-37A0A075B6S9 117 aa12.68□□□□□ -0.38
SHISA2-201ENST00000319420 CRYGBP07316 175 aa12.68□□□□□ -0.38
SHISA2-201ENST00000319420 UBE2L3P68036 154 aaKnown RBP12.68□□□□□ -0.38
SHISA2-201ENST00000319420 LBHQ53QV2 105 aaPredicted RBP12.68□□□□□ -0.38
SHISA2-201ENST00000319420 FAM120AOSQ5T036 256 aa12.68□□□□□ -0.38
SHISA2-201ENST00000319420 CACNG8Q8WXS5 425 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms