RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 NPIPB3Q92617 1050 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 SARAFQ96BY9 339 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 RNF7Q9UBF6 113 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 A0A0G2JLM5 398 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 IGHV3-64DA0A0J9YX35 117 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 NPIPB6E9PJ23 425 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 LTAP01374 205 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 CRYGCP07315 174 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 MC5RP33032 325 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 GATA4P43694 442 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 RBPJQ06330 500 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 ZCCHC24Q8N2G6 241 aaKnown RBP3.88□□□□□ -1.79
PTPN13-201ENST00000316707 OR1B1Q8NGR6 318 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 ST6GALNAC6Q969X2 333 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 NDUFA4L2Q9NRX3 87 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 IGKV1D-17A0A075B6S4 117 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 TRAV8-6A0A0B4J262 113 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 hDV102S1A0JD36 115 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 GATA2P23769 480 aaPredicted RBP3.88□□□□□ -1.79
PTPN13-201ENST00000316707 ZNF134P52741 427 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 FAM120AOSQ5T036 256 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 HARBI1Q96MB7 349 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 TRGV9Q99603 122 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 ZNF835Q9Y2P0 537 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 TMEM131Q92545 1883 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 PSMB11A5LHX3 300 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 H3BUT2 72 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 K7ESF4 209 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 PLA2G5P39877 138 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 GPR6P46095 362 aaPredicted RBP3.88□□□□□ -1.79
PTPN13-201ENST00000316707 GDF5OSQ5U4N7 250 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 TEX45Q8NA69 505 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 URB1-AS1Q96HZ7 61 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 SLC25A2Q9BXI2 301 aa3.88□□□□□ -1.79
PTPN13-201ENST00000316707 COL5A1P20908 1838 aaPredicted RBP3.88□□□□□ -1.79
PTPN13-201ENST00000316707 SERTM2A0A1B0GWG4 89 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 C19orf67A6NJJ6 358 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 PPIAL4DF5H284 164 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 MOSP00540 346 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 SAA1P0DJI8 122 aaPredicted RBP3.87□□□□□ -1.79
PTPN13-201ENST00000316707 SAMD13Q5VXD3 122 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 FAM53AQ6NSI3 398 aaPredicted RBP3.87□□□□□ -1.79
PTPN13-201ENST00000316707 LYPD1Q8N2G4 141 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 FXYD5Q96DB9 178 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 TMEM189A5PLL7 270 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 SMAD7O15105 426 aaKnown RBP3.87□□□□□ -1.79
PTPN13-201ENST00000316707 PYYP10082 97 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 BMI1P35226 326 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 TIMM23BQ5SRD1 257 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 OR4C13Q8NGP0 309 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 SCNM1Q9BWG6 230 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 HIGD1BQ9P298 99 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 RABAC1Q9UI14 185 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 METRNQ9UJH8 293 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 PILRBQ9UKJ0 227 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 APOHP02749 345 aaPredicted RBP3.87□□□□□ -1.79
PTPN13-201ENST00000316707 CELA3BP08861 270 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 RPL24P83731 157 aaKnown RBP3.87□□□□□ -1.79
PTPN13-201ENST00000316707 Q6ZR03 302 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 BLNKQ8WV28 456 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 NPFFR1Q9GZQ6 430 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 TMEM14CQ9P0S9 112 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 ZNF407Q9C0G0 2248 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 AHRRA9YTQ3 701 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 G3V4G9 280 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 IGHV3-13P01766 116 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 HBDP02042 147 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 LINC00205P59089 165 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 GATD1Q8NB37 220 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 PLPPR2Q96GM1 343 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 RALGAPA1Q6GYQ0 2036 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 C3orf80F5H4A9 247 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 LINC00305Q7Z4B0 112 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 Q86TA4 180 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 C8orf31Q8N9H6 132 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 TMEM116Q8NCL8 245 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 ZNF414Q96IQ9 312 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 LINC00479Q96M42 142 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 LINC00312Q9Y6C7 94 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 PHF3Q92576 2039 aaKnown RBP3.87□□□□□ -1.79
PTPN13-201ENST00000316707 TRAV5A0A0B4J249 113 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 IGHV1-2P23083 117 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 SRSF1Q07955 248 aaKnown RBP eCLIP3.87□□□□□ -1.79
PTPN13-201ENST00000316707 GUSBP1Q15486 140 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 LINC00696Q6ZRV3 163 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 KIR3DL3Q8N743 410 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 PGLYRP4Q96LB8 373 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 CACNA1EQ15878 2313 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 ADAMTS9Q9P2N4 1935 aa3.87□□□□□ -1.79
PTPN13-201ENST00000316707 A0A087X0K7 114 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 CECR9P0C854 216 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 SMIM13P0DJ93 91 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 SH2D7A6NKC9 451 aaPredicted RBP3.86□□□□□ -1.79
PTPN13-201ENST00000316707 VWC2LB2RUY7 222 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 ZNHIT1O43257 154 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 LYZL6O75951 148 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 TNFRSF1AP19438 455 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 S100A7P31151 101 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 GLRXP35754 106 aa3.86□□□□□ -1.79
PTPN13-201ENST00000316707 KIR3DS1Q14943 382 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms