RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 MED9Q9NWA0 146 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 OR5AC2Q9NZP5 309 aa2.86□□□□□ -1.95
SMCO3-201ENST00000316048 GTF3C1Q12789 2109 aa2.85□□□□□ -1.95
SMCO3-201ENST00000316048 BORCS7-ASMTA0A0B4J1R7 106 aa2.85□□□□□ -1.95
SMCO3-201ENST00000316048 TRAV39A0A0B4J263 110 aa2.85□□□□□ -1.95
SMCO3-201ENST00000316048 IGKV3D-20A0A0C4DH25 116 aa2.85□□□□□ -1.95
SMCO3-201ENST00000316048 NKX2-6A6NCS4 301 aa2.85□□□□□ -1.95
SMCO3-201ENST00000316048 DPRXA6NFQ7 191 aa2.85□□□□□ -1.95
SMCO3-201ENST00000316048 TMEM238C9JI98 176 aa2.85□□□□□ -1.95
SMCO3-201ENST00000316048 HBZP02008 142 aa2.85□□□□□ -1.95
SMCO3-201ENST00000316048 NMBP08949 121 aa2.85□□□□□ -1.95
SMCO3-201ENST00000316048 OR4A8P0C604 315 aa2.85□□□□□ -1.95
SMCO3-201ENST00000316048 SLC25A6P12236 298 aa2.85□□□□□ -1.95
SMCO3-201ENST00000316048 MUC1P15941 1255 aaPredicted RBP2.85□□□□□ -1.95
SMCO3-201ENST00000316048 CEACAM3P40198 252 aa2.85□□□□□ -1.95
SMCO3-201ENST00000316048 CA7P43166 264 aa2.85□□□□□ -1.95
SMCO3-201ENST00000316048 TLE4Q04727 773 aa2.85□□□□□ -1.95
SMCO3-201ENST00000316048 BSPH1Q075Z2 132 aa2.85□□□□□ -1.95
SMCO3-201ENST00000316048 CATR1Q13166 79 aa2.85□□□□□ -1.95
SMCO3-201ENST00000316048 MSMO1Q15800 293 aa2.85□□□□□ -1.95
SMCO3-201ENST00000316048 ZNF645Q8N7E2 425 aa2.85□□□□□ -1.95
SMCO3-201ENST00000316048 ST6GALNAC3Q8NDV1 305 aa2.85□□□□□ -1.95
SMCO3-201ENST00000316048 STOML3Q8TAV4 291 aa2.85□□□□□ -1.95
SMCO3-201ENST00000316048 LSM10Q969L4 123 aaKnown RBP2.85□□□□□ -1.95
SMCO3-201ENST00000316048 C16orf74Q96GX8 76 aa2.85□□□□□ -1.95
SMCO3-201ENST00000316048 WFIKKN1Q96NZ8 548 aa2.85□□□□□ -1.95
SMCO3-201ENST00000316048 SLC25A31Q9H0C2 315 aa2.85□□□□□ -1.95
SMCO3-201ENST00000316048 IGKV1D-17A0A075B6S4 117 aa2.84□□□□□ -1.95
SMCO3-201ENST00000316048 ODAMA1E959 279 aa2.84□□□□□ -1.95
SMCO3-201ENST00000316048 FAM231BA6NCW3 169 aa2.84□□□□□ -1.95
SMCO3-201ENST00000316048 I3L521 148 aa2.84□□□□□ -1.95
SMCO3-201ENST00000316048 TOR1AO14656 332 aa2.84□□□□□ -1.95
SMCO3-201ENST00000316048 ZNF737O75373 536 aa2.84□□□□□ -1.95
SMCO3-201ENST00000316048 IGHV1-46P01743 117 aa2.84□□□□□ -1.95
SMCO3-201ENST00000316048 EDDM3BP56851 147 aa2.84□□□□□ -1.95
SMCO3-201ENST00000316048 RIPPLY3P57055 190 aa2.84□□□□□ -1.95
SMCO3-201ENST00000316048 TMEM33P57088 247 aa2.84□□□□□ -1.95
SMCO3-201ENST00000316048 EDDM3AQ14507 147 aa2.84□□□□□ -1.95
SMCO3-201ENST00000316048 USF2Q15853 346 aaPredicted RBP2.84□□□□□ -1.95
SMCO3-201ENST00000316048 RNF212Q495C1 297 aa2.84□□□□□ -1.95
SMCO3-201ENST00000316048 OR51H1Q8NH63 302 aa2.84□□□□□ -1.95
SMCO3-201ENST00000316048 OR1L1Q8NH94 360 aa2.84□□□□□ -1.95
SMCO3-201ENST00000316048 LHFPL5Q8TAF8 219 aa2.84□□□□□ -1.95
SMCO3-201ENST00000316048 PACRGQ96M98 296 aaPredicted RBP2.84□□□□□ -1.95
SMCO3-201ENST00000316048 HSD17B10Q99714 261 aaKnown RBP2.84□□□□□ -1.95
SMCO3-201ENST00000316048 PYGO2Q9BRQ0 406 aa2.84□□□□□ -1.95
SMCO3-201ENST00000316048 CYTL1Q9NRR1 136 aa2.84□□□□□ -1.95
SMCO3-201ENST00000316048 SDHAF2Q9NX18 166 aa2.84□□□□□ -1.95
SMCO3-201ENST00000316048 CALYQ9NYX4 217 aa2.84□□□□□ -1.95
SMCO3-201ENST00000316048 ZFHX2Q9C0A1 2572 aaPredicted RBP2.84□□□□□ -1.95
SMCO3-201ENST00000316048 IGHV3OR15-7A0A075B7D8 119 aa2.84□□□□□ -1.96
SMCO3-201ENST00000316048 TRGV10A0A0A0MS01 117 aa2.84□□□□□ -1.96
SMCO3-201ENST00000316048 TRAV38-1A0A0B4J264 116 aa2.84□□□□□ -1.96
SMCO3-201ENST00000316048 A0A1B0GW15 77 aa2.84□□□□□ -1.96
SMCO3-201ENST00000316048 KRBOX1C9JBD0 128 aa2.84□□□□□ -1.96
SMCO3-201ENST00000316048 CHST1O43916 411 aa2.84□□□□□ -1.96
SMCO3-201ENST00000316048 YPEL1O60688 119 aa2.84□□□□□ -1.96
SMCO3-201ENST00000316048 CRYZL1O95825 349 aa2.84□□□□□ -1.96
SMCO3-201ENST00000316048 COX7A1P24310 79 aa2.84□□□□□ -1.96
SMCO3-201ENST00000316048 LPAR6P43657 344 aa2.84□□□□□ -1.96
SMCO3-201ENST00000316048 AKR1C2P52895 323 aa2.84□□□□□ -1.96
SMCO3-201ENST00000316048 CCL8P80075 99 aa2.84□□□□□ -1.96
SMCO3-201ENST00000316048 FBXL19-AS1Q494R0 122 aa2.84□□□□□ -1.96
SMCO3-201ENST00000316048 MORN2Q502X0 79 aa2.84□□□□□ -1.96
SMCO3-201ENST00000316048 NCMAPQ5T1S8 102 aa2.84□□□□□ -1.96
SMCO3-201ENST00000316048 DRAM1Q8N682 238 aa2.84□□□□□ -1.96
SMCO3-201ENST00000316048 C14orf178Q8N769 122 aaPredicted RBP2.84□□□□□ -1.96
SMCO3-201ENST00000316048 UBAC2Q8NBM4 344 aa2.84□□□□□ -1.96
SMCO3-201ENST00000316048 UBALD1Q8TB05 177 aa2.84□□□□□ -1.96
SMCO3-201ENST00000316048 RNASE6Q93091 150 aaKnown RBP2.84□□□□□ -1.96
SMCO3-201ENST00000316048 YPEL2Q96QA6 119 aa2.84□□□□□ -1.96
SMCO3-201ENST00000316048 OR2D2Q9H210 308 aa2.84□□□□□ -1.96
SMCO3-201ENST00000316048 KCNJ16Q9NPI9 418 aa2.84□□□□□ -1.96
SMCO3-201ENST00000316048 JPT1Q9UK76 154 aa2.84□□□□□ -1.96
SMCO3-201ENST00000316048 RCL1Q9Y2P8 373 aaKnown RBP2.84□□□□□ -1.96
SMCO3-201ENST00000316048 MMP24Q9Y5R2 645 aa2.84□□□□□ -1.96
SMCO3-201ENST00000316048 ESPL1Q14674 2120 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 hADV38S2A0JD32 116 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 PSMB11A5LHX3 300 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 ZNF729A6NN14 1252 aaPredicted RBP2.83□□□□□ -1.96
SMCO3-201ENST00000316048 C15orf65H3BRN8 121 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 FGF16O43320 207 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 SSSCA1O60232 199 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 PITX3O75364 302 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 MED6O75586 246 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 CYB5R3P00387 301 aaPredicted RBP2.83□□□□□ -1.96
SMCO3-201ENST00000316048 MOSP00540 346 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 TFF1P04155 84 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 SEC11BP0C7V7 166 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 RD3LP0DJH9 198 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 SSTR5P35346 364 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 PPP1CCP36873 323 aaKnown RBP2.83□□□□□ -1.96
SMCO3-201ENST00000316048 RAB7AP51149 207 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 RAB9AP51151 201 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 DLX1P56177 255 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 BAXQ07812 192 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 ZNF266Q14584 549 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 KIAA0087Q14695 138 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 SPRNQ5BIV9 151 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 NMSQ5H8A3 153 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms