RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 GUSBP1Q15486 140 aa11.12□□□□□ -0.63
DDX54-202ENST00000314045 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.12□□□□□ -0.63
DDX54-202ENST00000314045 RNF125Q96EQ8 232 aa11.12□□□□□ -0.63
DDX54-202ENST00000314045 IGKV1-39P01597 117 aa11.12□□□□□ -0.63
DDX54-202ENST00000314045 IGKV1D-39P04432 117 aa11.12□□□□□ -0.63
DDX54-202ENST00000314045 MSMPQ1L6U9 139 aa11.12□□□□□ -0.63
DDX54-202ENST00000314045 OR4B1Q8NGF8 309 aa11.12□□□□□ -0.63
DDX54-202ENST00000314045 HIST1H2BAQ96A08 127 aa11.12□□□□□ -0.63
DDX54-202ENST00000314045 TRAV20A0A0B4J274 112 aa11.12□□□□□ -0.63
DDX54-202ENST00000314045 TMEM189A5PLL7 270 aa11.12□□□□□ -0.63
DDX54-202ENST00000314045 J3QKU1 62 aa11.12□□□□□ -0.63
DDX54-202ENST00000314045 ISLRO14498 428 aa11.12□□□□□ -0.63
DDX54-202ENST00000314045 MSMBP08118 114 aa11.12□□□□□ -0.63
DDX54-202ENST00000314045 LYL1P12980 280 aa11.12□□□□□ -0.63
DDX54-202ENST00000314045 PVRIGQ6DKI7 326 aa11.12□□□□□ -0.63
DDX54-202ENST00000314045 RNF223E7ERA6 249 aa11.12□□□□□ -0.63
DDX54-202ENST00000314045 AGAP20933 346 aa11.12□□□□□ -0.63
DDX54-202ENST00000314045 EIF4E3Q8N5X7 224 aaKnown RBP11.12□□□□□ -0.63
DDX54-202ENST00000314045 CTSZQ9UBR2 303 aa11.12□□□□□ -0.63
DDX54-202ENST00000314045 LHBP01229 141 aa11.11□□□□□ -0.63
DDX54-202ENST00000314045 AMTP48728 403 aa11.11□□□□□ -0.63
DDX54-202ENST00000314045 LEMD1Q68G75 181 aa11.11□□□□□ -0.63
DDX54-202ENST00000314045 RPP25LQ8N5L8 163 aaKnown RBP11.11□□□□□ -0.63
DDX54-202ENST00000314045 MAPK1IP1LQ8NDC0 245 aa11.11□□□□□ -0.63
DDX54-202ENST00000314045 ZMAT5Q9UDW3 170 aaKnown RBP11.11□□□□□ -0.63
DDX54-202ENST00000314045 SCO2A0A1W2PP80 73 aa11.11□□□□□ -0.63
DDX54-202ENST00000314045 ZNF98A6NK75 572 aa11.11□□□□□ -0.63
DDX54-202ENST00000314045 SEC14L6B5MCN3 397 aa11.11□□□□□ -0.63
DDX54-202ENST00000314045 VENTXO95231 258 aa11.11□□□□□ -0.63
DDX54-202ENST00000314045 TMEM50AO95807 157 aa11.11□□□□□ -0.63
DDX54-202ENST00000314045 ZNF600Q6ZNG1 722 aa11.11□□□□□ -0.63
DDX54-202ENST00000314045 MBD3L1Q8WWY6 194 aa11.11□□□□□ -0.63
DDX54-202ENST00000314045 CARHSP1Q9Y2V2 147 aaKnown RBP11.11□□□□□ -0.63
DDX54-202ENST00000314045 AREGP15514 252 aa11.11□□□□□ -0.63
DDX54-202ENST00000314045 OR5AN1Q8NGI8 311 aa11.11□□□□□ -0.63
DDX54-202ENST00000314045 TRAV41A0A0B4J266 112 aa11.1□□□□□ -0.63
DDX54-202ENST00000314045 UBE2E1P51965 193 aa11.1□□□□□ -0.63
DDX54-202ENST00000314045 PMS2P11Q13670 270 aa11.1□□□□□ -0.63
DDX54-202ENST00000314045 SPANXN1Q5VSR9 72 aa11.1□□□□□ -0.63
DDX54-202ENST00000314045 OR4X2Q8NGF9 303 aa11.1□□□□□ -0.63
DDX54-202ENST00000314045 ITLN2Q8WWU7 325 aaPredicted RBP11.1□□□□□ -0.63
DDX54-202ENST00000314045 SRSF3P84103 164 aaKnown RBP11.1□□□□□ -0.63
DDX54-202ENST00000314045 LINC00311Q8N616 119 aa11.1□□□□□ -0.63
DDX54-202ENST00000314045 LINC01356Q8N9X3 169 aa11.1□□□□□ -0.63
DDX54-202ENST00000314045 PHOX2AO14813 284 aa11.09□□□□□ -0.63
DDX54-202ENST00000314045 HLA-DRB1P01911 266 aa11.09□□□□□ -0.63
DDX54-202ENST00000314045 PYYP10082 97 aa11.09□□□□□ -0.63
DDX54-202ENST00000314045 MLANAQ16655 118 aa11.09□□□□□ -0.63
DDX54-202ENST00000314045 FBXL19-AS1Q494R0 122 aa11.09□□□□□ -0.63
DDX54-202ENST00000314045 ZFYVE26Q68DK2 2539 aa11.09□□□□□ -0.63
DDX54-202ENST00000314045 MKI67P46013 3256 aaKnown RBP11.09□□□□□ -0.63
DDX54-202ENST00000314045 C22orf46C9J442 243 aa11.09□□□□□ -0.63
DDX54-202ENST00000314045 PEX7O00628 323 aa11.09□□□□□ -0.63
DDX54-202ENST00000314045 RNASE2P10153 161 aaKnown RBP11.09□□□□□ -0.63
DDX54-202ENST00000314045 F11RQ9Y624 299 aaKnown RBP11.09□□□□□ -0.63
DDX54-202ENST00000314045 CXorf65A6NEN9 183 aa11.09□□□□□ -0.63
DDX54-202ENST00000314045 C15orf32Q32M92 178 aa11.09□□□□□ -0.63
DDX54-202ENST00000314045 ZNF833PQ6ZTB9 187 aa11.09□□□□□ -0.63
DDX54-202ENST00000314045 DUX5Q96PT3 197 aa11.09□□□□□ -0.63
DDX54-202ENST00000314045 IGHV2-70DA0A0C4DH43 119 aa11.09□□□□□ -0.63
DDX54-202ENST00000314045 MYO9AB2RTY4 2548 aa11.09□□□□□ -0.63
DDX54-202ENST00000314045 TRGC2P03986 189 aa11.08□□□□□ -0.64
DDX54-202ENST00000314045 ZNF705AQ6ZN79 300 aaPredicted RBP11.08□□□□□ -0.64
DDX54-202ENST00000314045 MGST2Q99735 147 aa11.08□□□□□ -0.64
DDX54-202ENST00000314045 IGHV2-70P01814 119 aa11.08□□□□□ -0.64
DDX54-202ENST00000314045 APCSP02743 223 aa11.08□□□□□ -0.64
DDX54-202ENST00000314045 DEFA6Q01524 100 aa11.08□□□□□ -0.64
DDX54-202ENST00000314045 ZNF343Q6P1L6 599 aa11.08□□□□□ -0.64
DDX54-202ENST00000314045 LINC00518Q8N0U6 118 aa11.08□□□□□ -0.64
DDX54-202ENST00000314045 SFRP2Q96HF1 295 aa11.08□□□□□ -0.64
DDX54-202ENST00000314045 HIVEP2P31629 2446 aa11.08□□□□□ -0.64
DDX54-202ENST00000314045 A0A1B0GWJ7 208 aa11.08□□□□□ -0.64
DDX54-202ENST00000314045 A0A1W2PPI3 338 aa11.08□□□□□ -0.64
DDX54-202ENST00000314045 PSG1P11464 419 aa11.08□□□□□ -0.64
DDX54-202ENST00000314045 Q5PR19 223 aa11.08□□□□□ -0.64
DDX54-202ENST00000314045 SAPCD1Q5SSQ6 148 aa11.07□□□□□ -0.64
DDX54-202ENST00000314045 RUSC1-AS1Q66K80 236 aa11.07□□□□□ -0.64
DDX54-202ENST00000314045 ATRAIDQ6UW56 229 aa11.07□□□□□ -0.64
DDX54-202ENST00000314045 TMEM14BQ9NUH8 114 aa11.07□□□□□ -0.64
DDX54-202ENST00000314045 NUP210LQ5VU65 1888 aa11.07□□□□□ -0.64
DDX54-202ENST00000314045 VDAC2P45880 294 aaPredicted RBP11.07□□□□□ -0.64
DDX54-202ENST00000314045 HIST1H1AQ02539 215 aaPredicted RBP11.07□□□□□ -0.64
DDX54-202ENST00000314045 AGMATQ9BSE5 352 aa11.07□□□□□ -0.64
DDX54-202ENST00000314045 Q9H3A6 140 aa11.07□□□□□ -0.64
DDX54-202ENST00000314045 TGIF2-C20orf24A0A0A6YYL0 155 aa11.07□□□□□ -0.64
DDX54-202ENST00000314045 PAX9P55771 341 aa11.07□□□□□ -0.64
DDX54-202ENST00000314045 CD81P60033 236 aa11.07□□□□□ -0.64
DDX54-202ENST00000314045 CYB5R2Q6BCY4 276 aa11.07□□□□□ -0.64
DDX54-202ENST00000314045 GSX1Q9H4S2 264 aaPredicted RBP11.07□□□□□ -0.64
DDX54-202ENST00000314045 CHD9Q3L8U1 2897 aa11.07□□□□□ -0.64
DDX54-202ENST00000314045 TRAV5A0A0B4J249 113 aa11.07□□□□□ -0.64
DDX54-202ENST00000314045 STAG3L2P0CL84 134 aa11.07□□□□□ -0.64
DDX54-202ENST00000314045 STAG3L3P0CL85 134 aa11.07□□□□□ -0.64
DDX54-202ENST00000314045 CNTFRP26992 372 aa11.07□□□□□ -0.64
DDX54-202ENST00000314045 SNRPD3P62318 126 aaKnown RBP11.07□□□□□ -0.64
DDX54-202ENST00000314045 DIAPH2-AS1Q14236 149 aa11.07□□□□□ -0.64
DDX54-202ENST00000314045 A0A1W2PRE2 83 aa11.06□□□□□ -0.64
DDX54-202ENST00000314045 MT-ND6P03923 174 aa11.06□□□□□ -0.64
DDX54-202ENST00000314045 ZNF562Q6V9R5 426 aa11.06□□□□□ -0.64
DDX54-202ENST00000314045 PRORYQ9H606 182 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms