RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 A0A1W2PPV4 95 aa17.63■□□□□ 0.41
IRF3-201ENST00000309877 MFSD2BA6NFX1 497 aa17.63■□□□□ 0.41
IRF3-201ENST00000309877 DEFA5Q01523 94 aa17.63■□□□□ 0.41
IRF3-201ENST00000309877 NECAP1Q8NC96 275 aa17.63■□□□□ 0.41
IRF3-201ENST00000309877 VN1R17PQ8TDU5 208 aa17.63■□□□□ 0.41
IRF3-201ENST00000309877 MBD3L1Q8WWY6 194 aa17.63■□□□□ 0.41
IRF3-201ENST00000309877 GSX1Q9H4S2 264 aaPredicted RBP17.63■□□□□ 0.41
IRF3-201ENST00000309877 SLC25A22Q9H936 323 aa17.63■□□□□ 0.41
IRF3-201ENST00000309877 CTXND1A0A1B0GTU2 59 aa17.62■□□□□ 0.41
IRF3-201ENST00000309877 CD99P14209 185 aa17.62■□□□□ 0.41
IRF3-201ENST00000309877 CDC34P49427 236 aaPredicted RBP17.62■□□□□ 0.41
IRF3-201ENST00000309877 Q56UQ5 140 aa17.62■□□□□ 0.41
IRF3-201ENST00000309877 GNG7O60262 68 aa17.61■□□□□ 0.41
IRF3-201ENST00000309877 IGLC1P0CG04 106 aa17.61■□□□□ 0.41
IRF3-201ENST00000309877 C15orf32Q32M92 178 aa17.61■□□□□ 0.41
IRF3-201ENST00000309877 SPSB3Q6PJ21 355 aa17.61■□□□□ 0.41
IRF3-201ENST00000309877 SSX7Q7RTT5 188 aa17.61■□□□□ 0.41
IRF3-201ENST00000309877 COMMD1Q8N668 190 aa17.61■□□□□ 0.41
IRF3-201ENST00000309877 ZNF580Q9UK33 172 aa17.61■□□□□ 0.41
IRF3-201ENST00000309877 ZFHX3Q15911 3703 aa17.61■□□□□ 0.41
IRF3-201ENST00000309877 TRAV30A0A087WSZ9 112 aa17.61■□□□□ 0.41
IRF3-201ENST00000309877 RAB19A4D1S5 217 aa17.61■□□□□ 0.41
IRF3-201ENST00000309877 MAP1LC3B2A6NCE7 125 aa17.61■□□□□ 0.41
IRF3-201ENST00000309877 SEC14L6B5MCN3 397 aa17.61■□□□□ 0.41
IRF3-201ENST00000309877 FABP1P07148 127 aa17.61■□□□□ 0.41
IRF3-201ENST00000309877 SRD5A1P18405 259 aa17.61■□□□□ 0.41
IRF3-201ENST00000309877 PPIFP30405 207 aaKnown RBP17.61■□□□□ 0.41
IRF3-201ENST00000309877 TIGITQ495A1 244 aa17.61■□□□□ 0.41
IRF3-201ENST00000309877 RAB24Q969Q5 203 aa17.61■□□□□ 0.41
IRF3-201ENST00000309877 MAP1LC3BQ9GZQ8 125 aa17.61■□□□□ 0.41
IRF3-201ENST00000309877 TRAV1-1A0A0B4J248 108 aa17.6■□□□□ 0.41
IRF3-201ENST00000309877 IGHV3-23P01764 117 aa17.6■□□□□ 0.41
IRF3-201ENST00000309877 FOSL1P15407 271 aa17.6■□□□□ 0.41
IRF3-201ENST00000309877 TXN2Q99757 166 aa17.6■□□□□ 0.41
IRF3-201ENST00000309877 CDC42EP3Q9UKI2 254 aa17.6■□□□□ 0.41
IRF3-201ENST00000309877 TLN2Q9Y4G6 2542 aa17.6■□□□□ 0.41
IRF3-201ENST00000309877 H3BUA1 57 aa17.59■□□□□ 0.41
IRF3-201ENST00000309877 HMGB3O15347 200 aaKnown RBP17.59■□□□□ 0.41
IRF3-201ENST00000309877 SCGB2A1O75556 95 aa17.59■□□□□ 0.41
IRF3-201ENST00000309877 EIF3GO75821 320 aaKnown RBP eCLIP17.59■□□□□ 0.41
IRF3-201ENST00000309877 TRGV3P03979 118 aa17.59■□□□□ 0.41
IRF3-201ENST00000309877 RHOBP62745 196 aa17.59■□□□□ 0.41
IRF3-201ENST00000309877 CCL20P78556 96 aa17.59■□□□□ 0.41
IRF3-201ENST00000309877 TMEM95Q3KNT9 176 aa17.59■□□□□ 0.41
IRF3-201ENST00000309877 C19orf24Q9BVV8 132 aa17.59■□□□□ 0.41
IRF3-201ENST00000309877 ACANP16112 2415 aa17.59■□□□□ 0.41
IRF3-201ENST00000309877 DNAJC9-AS1A6NH13 148 aa17.58■□□□□ 0.41
IRF3-201ENST00000309877 FAM223BA6NKX1 122 aa17.58■□□□□ 0.41
IRF3-201ENST00000309877 FGF8P55075 233 aaPredicted RBP17.58■□□□□ 0.41
IRF3-201ENST00000309877 ATP5G2Q06055 141 aa17.58■□□□□ 0.41
IRF3-201ENST00000309877 FAM223AQ8IWN6 122 aa17.58■□□□□ 0.41
IRF3-201ENST00000309877 EIF4E3Q8N5X7 224 aaKnown RBP17.58■□□□□ 0.41
IRF3-201ENST00000309877 OR1L4Q8NGR5 311 aa17.58■□□□□ 0.41
IRF3-201ENST00000309877 ZNF702PQ9H963 129 aa17.58■□□□□ 0.41
IRF3-201ENST00000309877 COX7A2P2O60397 106 aa17.58■□□□□ 0.4
IRF3-201ENST00000309877 IGKV1-17P01599 117 aa17.58■□□□□ 0.4
IRF3-201ENST00000309877 FCGR2BP31994 310 aaPredicted RBP17.58■□□□□ 0.4
IRF3-201ENST00000309877 ZNF502Q8TBZ5 544 aa17.58■□□□□ 0.4
IRF3-201ENST00000309877 EEF1AKMT3Q96AZ1 226 aa17.58■□□□□ 0.4
IRF3-201ENST00000309877 DNAJC4Q9NNZ3 241 aa17.58■□□□□ 0.4
IRF3-201ENST00000309877 BRI3O95415 125 aa17.57■□□□□ 0.4
IRF3-201ENST00000309877 RD3LP0DJH9 198 aa17.57■□□□□ 0.4
IRF3-201ENST00000309877 TPPP2P59282 170 aa17.57■□□□□ 0.4
IRF3-201ENST00000309877 FAM78BQ5VT40 261 aa17.57■□□□□ 0.4
IRF3-201ENST00000309877 PFDN5Q99471 154 aa17.57■□□□□ 0.4
IRF3-201ENST00000309877 SEPSECSQ9HD40 501 aaKnown RBP17.57■□□□□ 0.4
IRF3-201ENST00000309877 DOK5Q9P104 306 aa17.57■□□□□ 0.4
IRF3-201ENST00000309877 OR2T8A6NH00 312 aa17.56■□□□□ 0.4
IRF3-201ENST00000309877 F8W735 103 aaPredicted RBP17.56■□□□□ 0.4
IRF3-201ENST00000309877 PF4V1P10720 104 aa17.56■□□□□ 0.4
IRF3-201ENST00000309877 PSG1P11464 419 aa17.56■□□□□ 0.4
IRF3-201ENST00000309877 S100A1P23297 94 aa17.56■□□□□ 0.4
IRF3-201ENST00000309877 GATAD1Q8WUU5 269 aa17.56■□□□□ 0.4
IRF3-201ENST00000309877 RNF2Q99496 336 aa17.56■□□□□ 0.4
IRF3-201ENST00000309877 PBDC1Q9BVG4 233 aa17.56■□□□□ 0.4
IRF3-201ENST00000309877 TRBV7-1A0A0A6YYK4 115 aa17.55■□□□□ 0.4
IRF3-201ENST00000309877 ORM2P19652 201 aa17.55■□□□□ 0.4
IRF3-201ENST00000309877 CFHR3Q02985 330 aa17.55■□□□□ 0.4
IRF3-201ENST00000309877 C10orf113Q5VZT2 155 aa17.55■□□□□ 0.4
IRF3-201ENST00000309877 UQCC3Q6UW78 93 aa17.55■□□□□ 0.4
IRF3-201ENST00000309877 ZNF418Q8TF45 676 aaPredicted RBP17.55■□□□□ 0.4
IRF3-201ENST00000309877 TMEM37Q8WXS4 190 aa17.55■□□□□ 0.4
IRF3-201ENST00000309877 FAM210AQ96ND0 272 aa17.55■□□□□ 0.4
IRF3-201ENST00000309877 GAR1Q9NY12 217 aaKnown RBP17.55■□□□□ 0.4
IRF3-201ENST00000309877 FUT9Q9Y231 359 aa17.55■□□□□ 0.4
IRF3-201ENST00000309877 OTOGQ6ZRI0 2925 aa17.55■□□□□ 0.4
IRF3-201ENST00000309877 MXRA5Q9NR99 2828 aa17.55■□□□□ 0.4
IRF3-201ENST00000309877 IGLV1-40P01703 118 aa17.55■□□□□ 0.4
IRF3-201ENST00000309877 OR5G3P0C626 314 aa17.55■□□□□ 0.4
IRF3-201ENST00000309877 YPEL3P61236 119 aaPredicted RBP17.55■□□□□ 0.4
IRF3-201ENST00000309877 SPATA31B1PQ5VZV4 182 aa17.55■□□□□ 0.4
IRF3-201ENST00000309877 IQCF2Q8IXL9 164 aa17.55■□□□□ 0.4
IRF3-201ENST00000309877 OR1B1Q8NGR6 318 aa17.55■□□□□ 0.4
IRF3-201ENST00000309877 EIF5A2Q9GZV4 153 aaKnown RBP17.55■□□□□ 0.4
IRF3-201ENST00000309877 ELOA3CA0A087WX78 387 aaPredicted RBP17.54■□□□□ 0.4
IRF3-201ENST00000309877 PSMB11A5LHX3 300 aa17.54■□□□□ 0.4
IRF3-201ENST00000309877 I3L521 148 aa17.54■□□□□ 0.4
IRF3-201ENST00000309877 NUPL2O15504 423 aaKnown RBP17.54■□□□□ 0.4
IRF3-201ENST00000309877 TOMM40O96008 361 aa17.54■□□□□ 0.4
IRF3-201ENST00000309877 GUK1Q16774 197 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms