RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 ADMP35318 185 aa13.7□□□□□ -0.22
SSSCA1-201ENST00000309328 SULT1A1P50225 295 aa13.7□□□□□ -0.22
SSSCA1-201ENST00000309328 YPEL3P61236 119 aaPredicted RBP13.7□□□□□ -0.22
SSSCA1-201ENST00000309328 GAMTQ14353 236 aa13.7□□□□□ -0.22
SSSCA1-201ENST00000309328 THAP6Q8TBB0 222 aa13.7□□□□□ -0.22
SSSCA1-201ENST00000309328 TMEM190Q8WZ59 177 aa13.7□□□□□ -0.22
SSSCA1-201ENST00000309328 NPIPB3Q92617 1050 aa13.7□□□□□ -0.22
SSSCA1-201ENST00000309328 ACY3Q96HD9 319 aa13.7□□□□□ -0.22
SSSCA1-201ENST00000309328 GINS3Q9BRX5 216 aa13.7□□□□□ -0.22
SSSCA1-201ENST00000309328 CHRDL1Q9BU40 450 aa13.7□□□□□ -0.22
SSSCA1-201ENST00000309328 MGAM2Q2M2H8 2515 aa13.7□□□□□ -0.22
SSSCA1-201ENST00000309328 PMS2P5A8MQ11 134 aa13.69□□□□□ -0.22
SSSCA1-201ENST00000309328 WIPF1O43516 503 aa13.69□□□□□ -0.22
SSSCA1-201ENST00000309328 CFDP00746 253 aaPredicted RBP13.69□□□□□ -0.22
SSSCA1-201ENST00000309328 IGLC1P0CG04 106 aa13.69□□□□□ -0.22
SSSCA1-201ENST00000309328 S100A11P31949 105 aa13.69□□□□□ -0.22
SSSCA1-201ENST00000309328 OR8G2PQ6IF36 304 aa13.69□□□□□ -0.22
SSSCA1-201ENST00000309328 ACOT7LQ6ZUV0 252 aa13.69□□□□□ -0.22
SSSCA1-201ENST00000309328 DAZ1Q9NQZ3 744 aaKnown RBP13.69□□□□□ -0.22
SSSCA1-201ENST00000309328 ZNF320A2RRD8 509 aa13.68□□□□□ -0.22
SSSCA1-201ENST00000309328 ZFP92A6NM28 416 aa13.68□□□□□ -0.22
SSSCA1-201ENST00000309328 K7EMT4 169 aa13.68□□□□□ -0.22
SSSCA1-201ENST00000309328 BMI1P35226 326 aa13.68□□□□□ -0.22
SSSCA1-201ENST00000309328 AKR1C1Q04828 323 aa13.68□□□□□ -0.22
SSSCA1-201ENST00000309328 MLANAQ16655 118 aa13.68□□□□□ -0.22
SSSCA1-201ENST00000309328 ATP6V1FQ16864 119 aa13.68□□□□□ -0.22
SSSCA1-201ENST00000309328 TMEM144Q7Z5S9 345 aa13.68□□□□□ -0.22
SSSCA1-201ENST00000309328 TMEM252Q8N6L7 170 aa13.68□□□□□ -0.22
SSSCA1-201ENST00000309328 Q8WTZ3 238 aa13.68□□□□□ -0.22
SSSCA1-201ENST00000309328 ZC4H2Q9NQZ6 224 aa13.68□□□□□ -0.22
SSSCA1-201ENST00000309328 IGKV1-17P01599 117 aa13.67□□□□□ -0.22
SSSCA1-201ENST00000309328 LYL1P12980 280 aa13.67□□□□□ -0.22
SSSCA1-201ENST00000309328 Q6ZNX1 250 aa13.67□□□□□ -0.22
SSSCA1-201ENST00000309328 THAP8Q8NA92 274 aa13.67□□□□□ -0.22
SSSCA1-201ENST00000309328 TRGV9Q99603 122 aa13.67□□□□□ -0.22
SSSCA1-201ENST00000309328 NPVFQ9HCQ7 196 aa13.67□□□□□ -0.22
SSSCA1-201ENST00000309328 MRPL36Q9P0J6 103 aaKnown RBP13.67□□□□□ -0.22
SSSCA1-201ENST00000309328 FAM24AA6NFZ4 105 aa13.66□□□□□ -0.22
SSSCA1-201ENST00000309328 SAP30O75446 220 aa13.66□□□□□ -0.22
SSSCA1-201ENST00000309328 YIF1AO95070 293 aa13.66□□□□□ -0.22
SSSCA1-201ENST00000309328 TOMM40O96008 361 aa13.66□□□□□ -0.22
SSSCA1-201ENST00000309328 RD3LP0DJH9 198 aa13.66□□□□□ -0.22
SSSCA1-201ENST00000309328 IGLL1P15814 213 aa13.66□□□□□ -0.22
SSSCA1-201ENST00000309328 S100A7P31151 101 aa13.66□□□□□ -0.22
SSSCA1-201ENST00000309328 SLC38A11Q08AI6 406 aa13.66□□□□□ -0.22
SSSCA1-201ENST00000309328 LILRB2Q8N423 598 aa13.66□□□□□ -0.22
SSSCA1-201ENST00000309328 OR2K2Q8NGT1 345 aa13.66□□□□□ -0.22
SSSCA1-201ENST00000309328 TECRQ9NZ01 308 aaKnown RBP13.66□□□□□ -0.22
SSSCA1-201ENST00000309328 OR5AC2Q9NZP5 309 aa13.66□□□□□ -0.22
SSSCA1-201ENST00000309328 MRPL27Q9P0M9 148 aaKnown RBP13.66□□□□□ -0.22
SSSCA1-201ENST00000309328 PFDN2Q9UHV9 154 aa13.66□□□□□ -0.22
SSSCA1-201ENST00000309328 FBN3Q75N90 2809 aa13.66□□□□□ -0.22
SSSCA1-201ENST00000309328 SMCO3A2RU48 225 aa13.65□□□□□ -0.22
SSSCA1-201ENST00000309328 H0YIZ8 118 aa13.65□□□□□ -0.22
SSSCA1-201ENST00000309328 CST7O76096 145 aa13.65□□□□□ -0.22
SSSCA1-201ENST00000309328 NUP62P37198 522 aaPredicted RBP13.65□□□□□ -0.22
SSSCA1-201ENST00000309328 SELENOTP62341 195 aa13.65□□□□□ -0.22
SSSCA1-201ENST00000309328 RAB31Q13636 194 aa13.65□□□□□ -0.22
SSSCA1-201ENST00000309328 SAMD5Q5TGI4 173 aa13.65□□□□□ -0.22
SSSCA1-201ENST00000309328 RNF126Q9BV68 326 aa13.65□□□□□ -0.22
SSSCA1-201ENST00000309328 UQCC1Q9NVA1 299 aa13.65□□□□□ -0.22
SSSCA1-201ENST00000309328 MBD2Q9UBB5 411 aa13.65□□□□□ -0.22
SSSCA1-201ENST00000309328 PUS1Q9Y606 427 aaKnown RBP eCLIP13.65□□□□□ -0.22
SSSCA1-201ENST00000309328 IGHV3-35A0A0C4DH35 117 aa13.64□□□□□ -0.23
SSSCA1-201ENST00000309328 IGSF23A1L1A6 192 aa13.64□□□□□ -0.23
SSSCA1-201ENST00000309328 C2orf70A6NJV1 201 aa13.64□□□□□ -0.23
SSSCA1-201ENST00000309328 CD5P06127 495 aa13.64□□□□□ -0.23
SSSCA1-201ENST00000309328 CSN3P07498 182 aa13.64□□□□□ -0.23
SSSCA1-201ENST00000309328 TIGITQ495A1 244 aa13.64□□□□□ -0.23
SSSCA1-201ENST00000309328 TEPPQ6URK8 271 aa13.64□□□□□ -0.23
SSSCA1-201ENST00000309328 UNQ9165/PRO28630Q6UXU0 137 aa13.64□□□□□ -0.23
SSSCA1-201ENST00000309328 TMEM217Q8N7C4 229 aa13.64□□□□□ -0.23
SSSCA1-201ENST00000309328 OR51G1Q8NGK1 321 aa13.64□□□□□ -0.23
SSSCA1-201ENST00000309328 OR2T35Q8NGX2 323 aa13.64□□□□□ -0.23
SSSCA1-201ENST00000309328 NARS2Q96I59 477 aaKnown RBP13.64□□□□□ -0.23
SSSCA1-201ENST00000309328 C20orf24Q9BUV8 137 aa13.64□□□□□ -0.23
SSSCA1-201ENST00000309328 TMEM147Q9BVK8 224 aa13.64□□□□□ -0.23
SSSCA1-201ENST00000309328 TRAV14DV4A0A0A6YYC5 116 aa13.63□□□□□ -0.23
SSSCA1-201ENST00000309328 TMEM213A2RRL7 107 aa13.63□□□□□ -0.23
SSSCA1-201ENST00000309328 MPDU1O75352 247 aa13.63□□□□□ -0.23
SSSCA1-201ENST00000309328 C8orf88P0DMB2 117 aa13.63□□□□□ -0.23
SSSCA1-201ENST00000309328 EWSR1Q01844 656 aaKnown RBP eCLIP13.63□□□□□ -0.23
SSSCA1-201ENST00000309328 VWC2Q2TAL6 325 aa13.63□□□□□ -0.23
SSSCA1-201ENST00000309328 TOMM20LQ6UXN7 152 aa13.63□□□□□ -0.23
SSSCA1-201ENST00000309328 IL34Q6ZMJ4 242 aa13.63□□□□□ -0.23
SSSCA1-201ENST00000309328 S100A7AQ86SG5 101 aa13.63□□□□□ -0.23
SSSCA1-201ENST00000309328 DYNLRB2Q8TF09 96 aa13.63□□□□□ -0.23
SSSCA1-201ENST00000309328 WDR89Q96FK6 387 aaPredicted RBP13.63□□□□□ -0.23
SSSCA1-201ENST00000309328 METTL26Q96S19 204 aa13.63□□□□□ -0.23
SSSCA1-201ENST00000309328 TMEM231Q9H6L2 316 aa13.63□□□□□ -0.23
SSSCA1-201ENST00000309328 NOTCH3Q9UM47 2321 aa13.62□□□□□ -0.23
SSSCA1-201ENST00000309328 A0A1W2PS18 150 aa13.62□□□□□ -0.23
SSSCA1-201ENST00000309328 FOLR2P14207 255 aa13.62□□□□□ -0.23
SSSCA1-201ENST00000309328 CBLN1P23435 193 aa13.62□□□□□ -0.23
SSSCA1-201ENST00000309328 RPL12P30050 165 aaKnown RBP13.62□□□□□ -0.23
SSSCA1-201ENST00000309328 KPRPQ5T749 579 aaPredicted RBP13.62□□□□□ -0.23
SSSCA1-201ENST00000309328 HAPLN4Q86UW8 402 aa13.62□□□□□ -0.23
SSSCA1-201ENST00000309328 BPIFCQ8NFQ6 507 aa13.62□□□□□ -0.23
SSSCA1-201ENST00000309328 ZFAND3Q9H8U3 227 aa13.62□□□□□ -0.23
SSSCA1-201ENST00000309328 CMYA5Q8N3K9 4069 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms