RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 MIR17HGQ75NE6 70 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 KLHDC3Q9BQ90 382 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 ZNF319Q9P2F9 582 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 CDX1P47902 265 aaPredicted RBP5.84□□□□□ -1.47
RAG1-201ENST00000299440 FAM3BP58499 235 aaPredicted RBP5.84□□□□□ -1.47
RAG1-201ENST00000299440 GNG5P63218 68 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 DPPA3Q6W0C5 159 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 TCF23Q7RTU1 214 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 C18orf12Q96KH6 178 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 ZFP30Q9Y2G7 519 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 TRBV7-1A0A0A6YYK4 115 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 NAT1P18440 290 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 AANATQ16613 207 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 MST1LQ2TV78 715 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 UQCC3Q6UW78 93 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 TM2D1Q9BX74 207 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 MRPS16Q9Y3D3 137 aaKnown RBP5.84□□□□□ -1.47
RAG1-201ENST00000299440 TICRRQ7Z2Z1 1910 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 CD5P06127 495 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 ZNF250P15622 560 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 ZFP36P26651 326 aaKnown RBP5.84□□□□□ -1.47
RAG1-201ENST00000299440 UCP3P55916 312 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 FAM120AOSQ5T036 256 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 GFI1BQ5VTD9 330 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 C18orf15Q96N68 181 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 FOXC2Q99958 501 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 PPP1R3EQ9H7J1 279 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 SRRM4A7MD48 611 aaKnown RBP5.84□□□□□ -1.47
RAG1-201ENST00000299440 HMSDA8MTL9 139 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 H3BRM9 83 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 ATP6V0E1O15342 81 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 LHBP01229 141 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 CNTFRP26992 372 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 MEF2BQ02080 365 aaPredicted RBP5.84□□□□□ -1.47
RAG1-201ENST00000299440 PHYHIPLQ96FC7 376 aa5.84□□□□□ -1.47
RAG1-201ENST00000299440 CD8AP01732 235 aa5.84□□□□□ -1.48
RAG1-201ENST00000299440 IGHV4-59P01825 116 aa5.84□□□□□ -1.48
RAG1-201ENST00000299440 CENPWQ5EE01 88 aa5.84□□□□□ -1.48
RAG1-201ENST00000299440 OR10D4PQ8NGN7 298 aa5.84□□□□□ -1.48
RAG1-201ENST00000299440 TRAF4Q9BUZ4 470 aaPredicted RBP5.84□□□□□ -1.48
RAG1-201ENST00000299440 NPCDR1Q9BY65 106 aa5.84□□□□□ -1.48
RAG1-201ENST00000299440 SPSB3Q6PJ21 355 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 CACNG8Q8WXS5 425 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 IGKV1D-13A0A0B4J2D9 117 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 FAM223BA6NKX1 122 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 IGKV1-13P0DP09 117 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 OTX1P32242 354 aaPredicted RBP5.83□□□□□ -1.48
RAG1-201ENST00000299440 DUTP33316 252 aaKnown RBP5.83□□□□□ -1.48
RAG1-201ENST00000299440 COTL1Q14019 142 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 FAM223AQ8IWN6 122 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 ST6GALNAC6Q969X2 333 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 SLX1AQ9BQ83 275 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 TRBV6-7A0A0A0MS04 114 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 TRAV8-6A0A0B4J262 113 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 G3V318 75 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 CLPSP04118 112 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 COX6CP09669 75 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 FER1L6-AS1Q8NA97 138 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 ZNRD1Q9P1U0 126 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 ATP5LO75964 103 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 SLC25A48Q6ZT89 311 aaKnown RBP5.83□□□□□ -1.48
RAG1-201ENST00000299440 COPS9Q8WXC6 57 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 HIST1H2BAQ96A08 127 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 IGKV1D-17A0A075B6S4 117 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 IGFL4Q6B9Z1 124 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 OR11H7Q8NGC8 314 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 HS3ST6Q96QI5 342 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 DAZ1Q9NQZ3 744 aaKnown RBP5.83□□□□□ -1.48
RAG1-201ENST00000299440 OTOGLQ3ZCN5 2332 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 IGHV4-61A0A0C4DH41 118 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 IGKV1-9A0A0C4DH69 117 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 KIAA1644Q3SXP7 199 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 PGPEP1Q9NXJ5 209 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 CUL9Q8IWT3 2517 aa5.83□□□□□ -1.48
RAG1-201ENST00000299440 FABP5P3A8MUU1 101 aa5.82□□□□□ -1.48
RAG1-201ENST00000299440 DIRC3C9JPN6 131 aa5.82□□□□□ -1.48
RAG1-201ENST00000299440 RPLP1P05386 114 aaKnown RBP5.82□□□□□ -1.48
RAG1-201ENST00000299440 PYYP10082 97 aa5.82□□□□□ -1.48
RAG1-201ENST00000299440 GAS1P54826 345 aa5.82□□□□□ -1.48
RAG1-201ENST00000299440 CIARTQ8N365 385 aaPredicted RBP5.82□□□□□ -1.48
RAG1-201ENST00000299440 JKAMPQ9P055 326 aa5.82□□□□□ -1.48
RAG1-201ENST00000299440 IGKV2-40A0A087WW87 121 aaPredicted RBP5.82□□□□□ -1.48
RAG1-201ENST00000299440 MPTX1A8MV57 137 aa5.82□□□□□ -1.48
RAG1-201ENST00000299440 DNAL4O96015 105 aa5.82□□□□□ -1.48
RAG1-201ENST00000299440 IGKV2D-40P01614 121 aaPredicted RBP5.82□□□□□ -1.48
RAG1-201ENST00000299440 TSSC4Q9Y5U2 329 aaPredicted RBP5.82□□□□□ -1.48
RAG1-201ENST00000299440 FER1L5A0AVI2 2057 aa5.82□□□□□ -1.48
RAG1-201ENST00000299440 LOC107984156A0A0G2JMH3 177 aa5.82□□□□□ -1.48
RAG1-201ENST00000299440 A0A0U1RRA0 63 aa5.82□□□□□ -1.48
RAG1-201ENST00000299440 FAM74A7A6NL05 159 aa5.82□□□□□ -1.48
RAG1-201ENST00000299440 GPX4P36969 197 aaPredicted RBP5.82□□□□□ -1.48
RAG1-201ENST00000299440 CKS1BP61024 79 aa5.82□□□□□ -1.48
RAG1-201ENST00000299440 CLLU1Q5K131 121 aa5.82□□□□□ -1.48
RAG1-201ENST00000299440 ARL17AQ8IVW1 177 aa5.82□□□□□ -1.48
RAG1-201ENST00000299440 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.82□□□□□ -1.48
RAG1-201ENST00000299440 ABCA1O95477 2261 aa5.82□□□□□ -1.48
RAG1-201ENST00000299440 FHITP49789 147 aa5.82□□□□□ -1.48
RAG1-201ENST00000299440 RPL36AP83881 106 aaKnown RBP5.82□□□□□ -1.48
RAG1-201ENST00000299440 RPL36ALQ969Q0 106 aaKnown RBP5.82□□□□□ -1.48
RAG1-201ENST00000299440 SCGB3A1Q96QR1 104 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms