RNA–Protein interactions for RNA: ENST00000299238.6

HPS6-201, Transcript of HPS6, biogenesis of lysosomal organelles complex 2 subunit 3, humanhuman

APPRIS P1 BASIC

Gene HPS6, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6-201ENST00000299238 TMEM249Q2WGJ8 235 aa16.42■□□□□ 0.22
HPS6-201ENST00000299238 SSMEM1Q8WWF3 244 aa16.42■□□□□ 0.22
HPS6-201ENST00000299238 RAB1CQ92928 201 aa16.42■□□□□ 0.22
HPS6-201ENST00000299238 S1PR3Q99500 378 aa16.42■□□□□ 0.22
HPS6-201ENST00000299238 MS4A5Q9H3V2 200 aa16.42■□□□□ 0.22
HPS6-201ENST00000299238 NPVFQ9HCQ7 196 aa16.42■□□□□ 0.22
HPS6-201ENST00000299238 TMEM140Q9NV12 185 aa16.42■□□□□ 0.22
HPS6-201ENST00000299238 PEF1Q9UBV8 284 aaKnown RBP16.42■□□□□ 0.22
HPS6-201ENST00000299238 A0A1W2PPV4 95 aa16.41■□□□□ 0.22
HPS6-201ENST00000299238 MYOD1P15172 320 aa16.41■□□□□ 0.22
HPS6-201ENST00000299238 NBL1P41271 181 aa16.41■□□□□ 0.22
HPS6-201ENST00000299238 TMPRSS3P57727 454 aa16.41■□□□□ 0.22
HPS6-201ENST00000299238 ERVK-16P61578 105 aa16.41■□□□□ 0.22
HPS6-201ENST00000299238 CX3CL1P78423 397 aa16.41■□□□□ 0.22
HPS6-201ENST00000299238 TCF24Q7RTU0 167 aa16.41■□□□□ 0.22
HPS6-201ENST00000299238 MUC6Q6W4X9 2439 aa16.41■□□□□ 0.22
HPS6-201ENST00000299238 OR4C46A6NHA9 309 aa16.41■□□□□ 0.22
HPS6-201ENST00000299238 CD5LO43866 347 aa16.41■□□□□ 0.22
HPS6-201ENST00000299238 GPR6P46095 362 aaPredicted RBP16.41■□□□□ 0.22
HPS6-201ENST00000299238 SMAGPQ0VAQ4 97 aa16.41■□□□□ 0.22
HPS6-201ENST00000299238 TECRQ9NZ01 308 aaKnown RBP16.41■□□□□ 0.22
HPS6-201ENST00000299238 PIEZO2Q9H5I5 2752 aa16.4■□□□□ 0.22
HPS6-201ENST00000299238 PPIAL4EA0A075B759 164 aa16.4■□□□□ 0.22
HPS6-201ENST00000299238 PPIAL4CA0A0B4J2A2 164 aa16.4■□□□□ 0.22
HPS6-201ENST00000299238 C7orf71A4D174 169 aa16.4■□□□□ 0.22
HPS6-201ENST00000299238 PPIAL4DF5H284 164 aa16.4■□□□□ 0.22
HPS6-201ENST00000299238 MPDU1O75352 247 aa16.4■□□□□ 0.22
HPS6-201ENST00000299238 PPIAL4FP0DN26 164 aa16.4■□□□□ 0.22
HPS6-201ENST00000299238 DOLPP1Q86YN1 238 aa16.4■□□□□ 0.22
HPS6-201ENST00000299238 DEFB108BQ8NET1 73 aa16.4■□□□□ 0.22
HPS6-201ENST00000299238 MGST2Q99735 147 aa16.4■□□□□ 0.22
HPS6-201ENST00000299238 SH2D7A6NKC9 451 aaPredicted RBP16.4■□□□□ 0.22
HPS6-201ENST00000299238 IGHV1-46P01743 117 aa16.4■□□□□ 0.22
HPS6-201ENST00000299238 LINC00869P0C866 280 aa16.4■□□□□ 0.22
HPS6-201ENST00000299238 AZU1P20160 251 aa16.4■□□□□ 0.22
HPS6-201ENST00000299238 CD40P25942 277 aa16.4■□□□□ 0.22
HPS6-201ENST00000299238 TNFAIP6P98066 277 aaPredicted RBP16.4■□□□□ 0.22
HPS6-201ENST00000299238 CT45A1Q5HYN5 189 aa16.4■□□□□ 0.22
HPS6-201ENST00000299238 UFSP1Q6NVU6 142 aa16.4■□□□□ 0.22
HPS6-201ENST00000299238 STPG3Q8N7X2 389 aa16.4■□□□□ 0.22
HPS6-201ENST00000299238 CT45A3Q8NHU0 189 aa16.4■□□□□ 0.22
HPS6-201ENST00000299238 FAM222BQ8WU58 562 aa16.4■□□□□ 0.22
HPS6-201ENST00000299238 GCM1Q9NP62 436 aa16.4■□□□□ 0.22
HPS6-201ENST00000299238 TCF19Q9Y242 345 aa16.4■□□□□ 0.22
HPS6-201ENST00000299238 PCNX1Q96RV3 2341 aa16.39■□□□□ 0.22
HPS6-201ENST00000299238 MT-ND6P03923 174 aa16.39■□□□□ 0.21
HPS6-201ENST00000299238 OPRK1P41145 380 aa16.39■□□□□ 0.21
HPS6-201ENST00000299238 KIR2DS2P43631 304 aa16.39■□□□□ 0.21
HPS6-201ENST00000299238 EAF1Q96JC9 268 aaPredicted RBP16.39■□□□□ 0.21
HPS6-201ENST00000299238 JMJD8Q96S16 334 aa16.39■□□□□ 0.21
HPS6-201ENST00000299238 RNF7Q9UBF6 113 aa16.39■□□□□ 0.21
HPS6-201ENST00000299238 ARFGEF3Q5TH69 2177 aa16.39■□□□□ 0.21
HPS6-201ENST00000299238 WDR73Q6P4I2 378 aa16.39■□□□□ 0.21
HPS6-201ENST00000299238 SLC25A34Q6PIV7 304 aa16.39■□□□□ 0.21
HPS6-201ENST00000299238 C12orf54Q6X4T0 127 aa16.39■□□□□ 0.21
HPS6-201ENST00000299238 C1orf159Q96HA4 380 aa16.39■□□□□ 0.21
HPS6-201ENST00000299238 MCRIP2Q9BUT9 160 aaKnown RBP16.39■□□□□ 0.21
HPS6-201ENST00000299238 GGTLC1Q9BX51 225 aa16.39■□□□□ 0.21
HPS6-201ENST00000299238 RNASEKQ6P5S7 137 aaKnown RBP16.38■□□□□ 0.21
HPS6-201ENST00000299238 HINT2Q9BX68 163 aa16.38■□□□□ 0.21
HPS6-201ENST00000299238 J3QR06 171 aa16.38■□□□□ 0.21
HPS6-201ENST00000299238 APCSP02743 223 aa16.38■□□□□ 0.21
HPS6-201ENST00000299238 SAA2P0DJI9 122 aaPredicted RBP16.38■□□□□ 0.21
HPS6-201ENST00000299238 TRGV8A0A0C4DH27 118 aa16.37■□□□□ 0.21
HPS6-201ENST00000299238 KBTBD11-OT1A0A1B0GTJ5 212 aa16.37■□□□□ 0.21
HPS6-201ENST00000299238 C15orf61A6NNL5 157 aa16.37■□□□□ 0.21
HPS6-201ENST00000299238 CA1P00915 261 aaPredicted RBP16.37■□□□□ 0.21
HPS6-201ENST00000299238 LINC00173Q6ZV60 143 aa16.37■□□□□ 0.21
HPS6-201ENST00000299238 ZNRD1Q9P1U0 126 aa16.37■□□□□ 0.21
HPS6-201ENST00000299238 SMPXQ9UHP9 88 aa16.37■□□□□ 0.21
HPS6-201ENST00000299238 SNAI2O43623 268 aa16.37■□□□□ 0.21
HPS6-201ENST00000299238 CHODLQ9H9P2 273 aa16.37■□□□□ 0.21
HPS6-201ENST00000299238 LSM4Q9Y4Z0 139 aaKnown RBP16.37■□□□□ 0.21
HPS6-201ENST00000299238 A0A0G2JNJ9 132 aa16.36■□□□□ 0.21
HPS6-201ENST00000299238 SPATA31B1PQ5VZV4 182 aa16.36■□□□□ 0.21
HPS6-201ENST00000299238 OR4A5Q8NH83 315 aa16.36■□□□□ 0.21
HPS6-201ENST00000299238 OR2T6Q8NHC8 308 aa16.36■□□□□ 0.21
HPS6-201ENST00000299238 SNRNP40Q96DI7 357 aaKnown RBP16.36■□□□□ 0.21
HPS6-201ENST00000299238 ABHD17AQ96GS6 310 aa16.36■□□□□ 0.21
HPS6-201ENST00000299238 THYN1Q9P016 225 aa16.36■□□□□ 0.21
HPS6-201ENST00000299238 Q9UFV3 132 aa16.36■□□□□ 0.21
HPS6-201ENST00000299238 PKDREJQ9NTG1 2253 aa16.36■□□□□ 0.21
HPS6-201ENST00000299238 DYSFO75923 2080 aa16.36■□□□□ 0.21
HPS6-201ENST00000299238 ZGRF1Q86YA3 2104 aa16.36■□□□□ 0.21
HPS6-201ENST00000299238 UQCRFS1P47985 274 aa16.36■□□□□ 0.21
HPS6-201ENST00000299238 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.36■□□□□ 0.21
HPS6-201ENST00000299238 GAFA1Q96PS6 74 aa16.36■□□□□ 0.21
HPS6-201ENST00000299238 COMMD5Q9GZQ3 224 aa16.36■□□□□ 0.21
HPS6-201ENST00000299238 ST20Q9HBF5 79 aa16.36■□□□□ 0.21
HPS6-201ENST00000299238 ACACAQ13085 2346 aa16.35■□□□□ 0.21
HPS6-201ENST00000299238 AMY1AP04745 511 aa16.35■□□□□ 0.21
HPS6-201ENST00000299238 RPL8P62917 257 aaKnown RBP16.35■□□□□ 0.21
HPS6-201ENST00000299238 TMEM14BQ9NUH8 114 aa16.35■□□□□ 0.21
HPS6-201ENST00000299238 STAG3L2P0CL84 134 aa16.35■□□□□ 0.21
HPS6-201ENST00000299238 STAG3L3P0CL85 134 aa16.35■□□□□ 0.21
HPS6-201ENST00000299238 NEGR1Q7Z3B1 354 aa16.35■□□□□ 0.21
HPS6-201ENST00000299238 SPACA3Q8IXA5 215 aa16.35■□□□□ 0.21
HPS6-201ENST00000299238 NUP37Q8NFH4 326 aa16.35■□□□□ 0.21
HPS6-201ENST00000299238 FOXA2Q9Y261 457 aaPredicted RBP16.35■□□□□ 0.21
HPS6-201ENST00000299238 PRRG2O14669 202 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms