RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 TMEM86BQ8N661 226 aa4.68□□□□□ -1.66
CPSF2-201ENST00000298875 C17orf98A8MV24 154 aa4.68□□□□□ -1.66
CPSF2-201ENST00000298875 CD300EQ496F6 205 aaPredicted RBP4.68□□□□□ -1.66
CPSF2-201ENST00000298875 UBE2DNLQ8IWF7 75 aa4.68□□□□□ -1.66
CPSF2-201ENST00000298875 FOXL1Q12952 345 aa4.68□□□□□ -1.66
CPSF2-201ENST00000298875 STPG1Q5TH74 334 aa4.68□□□□□ -1.66
CPSF2-201ENST00000298875 HIGD1CA8MV81 97 aa4.68□□□□□ -1.66
CPSF2-201ENST00000298875 TBX6O95947 436 aaPredicted RBP4.68□□□□□ -1.66
CPSF2-201ENST00000298875 CD5P06127 495 aa4.68□□□□□ -1.66
CPSF2-201ENST00000298875 EGR4Q05215 589 aa4.68□□□□□ -1.66
CPSF2-201ENST00000298875 A0A0G2JMZ2 1700 aa4.68□□□□□ -1.66
CPSF2-201ENST00000298875 LRRC37A2A6NM11 1700 aa4.68□□□□□ -1.66
CPSF2-201ENST00000298875 M0R2P5 195 aa4.68□□□□□ -1.66
CPSF2-201ENST00000298875 IFI27L2Q9H2X8 130 aa4.68□□□□□ -1.66
CPSF2-201ENST00000298875 PLCE1Q9P212 2302 aa4.68□□□□□ -1.66
CPSF2-201ENST00000298875 PRR32B1ATL7 298 aa4.68□□□□□ -1.66
CPSF2-201ENST00000298875 GAGE2AQ6NT46 116 aa4.68□□□□□ -1.66
CPSF2-201ENST00000298875 MIR17HGQ75NE6 70 aa4.68□□□□□ -1.66
CPSF2-201ENST00000298875 MRPL20Q9BYC9 149 aaKnown RBP4.68□□□□□ -1.66
CPSF2-201ENST00000298875 FREM3P0C091 2139 aa4.68□□□□□ -1.66
CPSF2-201ENST00000298875 RNF222A6NCQ9 220 aa4.68□□□□□ -1.66
CPSF2-201ENST00000298875 BSPH1Q075Z2 132 aa4.68□□□□□ -1.66
CPSF2-201ENST00000298875 RSPO4Q2I0M5 234 aaPredicted RBP4.68□□□□□ -1.66
CPSF2-201ENST00000298875 KMT2EQ8IZD2 1858 aa4.68□□□□□ -1.66
CPSF2-201ENST00000298875 UPK2O00526 184 aa4.68□□□□□ -1.66
CPSF2-201ENST00000298875 SLC25A15Q9Y619 301 aa4.68□□□□□ -1.66
CPSF2-201ENST00000298875 TP53BP1Q12888 1972 aaPredicted RBP4.68□□□□□ -1.66
CPSF2-201ENST00000298875 RAMP3O60896 148 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 CD7P09564 240 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 PRB4P10163 310 aaPredicted RBP4.67□□□□□ -1.66
CPSF2-201ENST00000298875 SRSF1Q07955 248 aaKnown RBP eCLIP4.67□□□□□ -1.66
CPSF2-201ENST00000298875 NYNRINQ9P2P1 1898 aaKnown RBP4.67□□□□□ -1.66
CPSF2-201ENST00000298875 INTS1Q8N201 2190 aaKnown RBP4.67□□□□□ -1.66
CPSF2-201ENST00000298875 AHRRA9YTQ3 701 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 PPP1R27Q86WC6 154 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 F2Z2F3 143 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 CDCP2Q5VXM1 449 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 KLHDC3Q9BQ90 382 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 H3BQ85 93 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 CMC4P56277 68 aaPredicted RBP4.67□□□□□ -1.66
CPSF2-201ENST00000298875 B9A039 149 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 RNF182Q8N6D2 247 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 K7EP34 96 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 TNFRSF6BO95407 300 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 PRB3Q04118 309 aaPredicted RBP4.67□□□□□ -1.66
CPSF2-201ENST00000298875 FAM166AQ6J272 317 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 HEPN1Q6WQI6 88 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 ABHD17AQ96GS6 310 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 EDA2RQ9HAV5 297 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 CACNA1BQ00975 2339 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 IGKCP01834 107 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 SIPA1L1O43166 1804 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 TRAV5A0A0B4J249 113 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 CD28P10747 220 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 RNF166Q96A37 237 aaPredicted RBP4.67□□□□□ -1.66
CPSF2-201ENST00000298875 ASCL2Q99929 193 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 PEMTQ9UBM1 199 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 TRBV6-7A0A0A0MS04 114 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 HTN3P15516 51 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 IFI27P40305 119 aaPredicted RBP4.67□□□□□ -1.66
CPSF2-201ENST00000298875 PCOLCEQ15113 449 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 TMEM144Q7Z5S9 345 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 STHQ8IWL8 128 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 SAA2-SAA4A0A096LPE2 208 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 A6NNC1 897 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 PIN1P1O15428 100 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 SAA2P0DJI9 122 aaPredicted RBP4.67□□□□□ -1.66
CPSF2-201ENST00000298875 Q6ZT83 130 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 FAM57AQ8TBR7 257 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 FBXL15Q9H469 300 aa4.67□□□□□ -1.66
CPSF2-201ENST00000298875 CACNA1HO95180 2353 aa4.66□□□□□ -1.66
CPSF2-201ENST00000298875 WNK1Q9H4A3 2382 aa4.66□□□□□ -1.66
CPSF2-201ENST00000298875 ATP1A1-AS1Q5TC04 95 aa4.66□□□□□ -1.66
CPSF2-201ENST00000298875 CACNA1GO43497 2377 aa4.66□□□□□ -1.66
CPSF2-201ENST00000298875 ADAMTSL5Q6ZMM2 481 aa4.66□□□□□ -1.66
CPSF2-201ENST00000298875 OR13A1Q8NGR1 328 aa4.66□□□□□ -1.66
CPSF2-201ENST00000298875 COQ2Q96H96 371 aa4.66□□□□□ -1.66
CPSF2-201ENST00000298875 REPIN1Q9BWE0 567 aaKnown RBP4.66□□□□□ -1.66
CPSF2-201ENST00000298875 OTORQ9NRC9 128 aa4.66□□□□□ -1.66
CPSF2-201ENST00000298875 RTN4RL2Q86UN3 420 aa4.66□□□□□ -1.66
CPSF2-201ENST00000298875 C1orf162Q8NEQ5 155 aaPredicted RBP4.66□□□□□ -1.66
CPSF2-201ENST00000298875 LINC01560Q8TB33 94 aa4.66□□□□□ -1.66
CPSF2-201ENST00000298875 VKORC1Q9BQB6 163 aa4.66□□□□□ -1.66
CPSF2-201ENST00000298875 POLR2AP24928 1970 aaKnown RBP4.66□□□□□ -1.66
CPSF2-201ENST00000298875 GAGE12BA1L429 117 aa4.66□□□□□ -1.66
CPSF2-201ENST00000298875 FOXH1O75593 365 aa4.66□□□□□ -1.66
CPSF2-201ENST00000298875 CTSBP07858 339 aa4.66□□□□□ -1.66
CPSF2-201ENST00000298875 PDE6HQ13956 83 aa4.66□□□□□ -1.66
CPSF2-201ENST00000298875 RTBDNQ9BSG5 229 aaPredicted RBP4.66□□□□□ -1.66
CPSF2-201ENST00000298875 CST9LQ9H4G1 147 aa4.66□□□□□ -1.66
CPSF2-201ENST00000298875 IGFBP3P17936 291 aaPredicted RBP4.66□□□□□ -1.66
CPSF2-201ENST00000298875 SLC25A45Q8N413 288 aa4.66□□□□□ -1.66
CPSF2-201ENST00000298875 MSGN1A6NI15 193 aa4.66□□□□□ -1.66
CPSF2-201ENST00000298875 C1QL2Q7Z5L3 287 aa4.66□□□□□ -1.66
CPSF2-201ENST00000298875 HEATR5AQ86XA9 2040 aa4.66□□□□□ -1.66
CPSF2-201ENST00000298875 WFDC12Q8WWY7 111 aa4.66□□□□□ -1.66
CPSF2-201ENST00000298875 CACNG8Q8WXS5 425 aa4.66□□□□□ -1.66
CPSF2-201ENST00000298875 SLC25A39Q9BZJ4 359 aaPredicted RBP4.66□□□□□ -1.66
CPSF2-201ENST00000298875 PRDM6Q9NQX0 595 aa4.66□□□□□ -1.66
CPSF2-201ENST00000298875 C21orf62Q9NYP8 219 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms