RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 IDI2-AS1Q9NZ38 188 aa12.83□□□□□ -0.36
CTDSP1-201ENST00000273062 DUSP13Q9UII6 198 aa12.83□□□□□ -0.36
CTDSP1-201ENST00000273062 LAMA5O15230 3695 aa12.82□□□□□ -0.36
CTDSP1-201ENST00000273062 IGHV3-7P01780 117 aa12.82□□□□□ -0.36
CTDSP1-201ENST00000273062 FOXB1Q99853 325 aa12.82□□□□□ -0.36
CTDSP1-201ENST00000273062 C20orf78Q9BR46 151 aa12.82□□□□□ -0.36
CTDSP1-201ENST00000273062 F11RQ9Y624 299 aaKnown RBP12.82□□□□□ -0.36
CTDSP1-201ENST00000273062 DNAJC13O75165 2243 aa12.82□□□□□ -0.36
CTDSP1-201ENST00000273062 DMXL1Q9Y485 3027 aa12.82□□□□□ -0.36
CTDSP1-201ENST00000273062 KLRC4-KLRK1H3BQV0 150 aa12.82□□□□□ -0.36
CTDSP1-201ENST00000273062 CSN3P07498 182 aa12.82□□□□□ -0.36
CTDSP1-201ENST00000273062 ZNF137PP52743 207 aa12.82□□□□□ -0.36
CTDSP1-201ENST00000273062 FOXG1P55316 489 aaPredicted RBP12.82□□□□□ -0.36
CTDSP1-201ENST00000273062 TMEM164Q5U3C3 297 aa12.82□□□□□ -0.36
CTDSP1-201ENST00000273062 C1orf122Q6ZSJ8 110 aa12.82□□□□□ -0.36
CTDSP1-201ENST00000273062 H2BFWTQ7Z2G1 175 aa12.82□□□□□ -0.36
CTDSP1-201ENST00000273062 VGLL1Q99990 258 aa12.82□□□□□ -0.36
CTDSP1-201ENST00000273062 MRPL16Q9NX20 251 aaKnown RBP12.82□□□□□ -0.36
CTDSP1-201ENST00000273062 DLL3Q9NYJ7 618 aa12.82□□□□□ -0.36
CTDSP1-201ENST00000273062 KBTBD11-OT1A0A1B0GTJ5 212 aa12.81□□□□□ -0.36
CTDSP1-201ENST00000273062 DNPH1O43598 174 aa12.81□□□□□ -0.36
CTDSP1-201ENST00000273062 RTL8BQ17RB0 113 aa12.81□□□□□ -0.36
CTDSP1-201ENST00000273062 RASL11AQ6T310 242 aa12.81□□□□□ -0.36
CTDSP1-201ENST00000273062 ABHD12Q8N2K0 398 aa12.81□□□□□ -0.36
CTDSP1-201ENST00000273062 TTTY12Q9BZ98 90 aa12.81□□□□□ -0.36
CTDSP1-201ENST00000273062 A0A1B0GXF2 115 aa12.81□□□□□ -0.36
CTDSP1-201ENST00000273062 PRSS46E5RG02 174 aa12.81□□□□□ -0.36
CTDSP1-201ENST00000273062 CHCHD1Q96BP2 118 aaKnown RBP12.81□□□□□ -0.36
CTDSP1-201ENST00000273062 LSM4Q9Y4Z0 139 aaKnown RBP12.81□□□□□ -0.36
CTDSP1-201ENST00000273062 A0A096LPE4 126 aa12.8□□□□□ -0.36
CTDSP1-201ENST00000273062 A0A1W2PPZ6 126 aa12.8□□□□□ -0.36
CTDSP1-201ENST00000273062 LIPFP07098 398 aa12.8□□□□□ -0.36
CTDSP1-201ENST00000273062 OR9G9P0C7N8 305 aa12.8□□□□□ -0.36
CTDSP1-201ENST00000273062 INO80CQ6PI98 192 aaPredicted RBP12.8□□□□□ -0.36
CTDSP1-201ENST00000273062 PCP2Q8IVA1 136 aa12.8□□□□□ -0.36
CTDSP1-201ENST00000273062 DDB2Q92466 427 aa12.8□□□□□ -0.36
CTDSP1-201ENST00000273062 FAM173AQ9BQD7 235 aa12.8□□□□□ -0.36
CTDSP1-201ENST00000273062 TMUB1Q9BVT8 246 aa12.8□□□□□ -0.36
CTDSP1-201ENST00000273062 JPT1Q9UK76 154 aa12.8□□□□□ -0.36
CTDSP1-201ENST00000273062 PCNX2A6NKB5 2137 aa12.8□□□□□ -0.36
CTDSP1-201ENST00000273062 NPIPB11E5RHQ5 1161 aa12.8□□□□□ -0.36
CTDSP1-201ENST00000273062 MPDU1O75352 247 aa12.8□□□□□ -0.36
CTDSP1-201ENST00000273062 FAM87AP0C7U9 286 aa12.8□□□□□ -0.36
CTDSP1-201ENST00000273062 FXYD2P54710 66 aa12.8□□□□□ -0.36
CTDSP1-201ENST00000273062 TUSC5Q8IXB3 177 aa12.8□□□□□ -0.36
CTDSP1-201ENST00000273062 OR2H1Q9GZK4 316 aa12.8□□□□□ -0.36
CTDSP1-201ENST00000273062 TRBV6-6A0A0A6YYG2 114 aa12.79□□□□□ -0.36
CTDSP1-201ENST00000273062 A1L4Q6 167 aa12.79□□□□□ -0.36
CTDSP1-201ENST00000273062 CCL2P13500 99 aa12.79□□□□□ -0.36
CTDSP1-201ENST00000273062 TEPPQ6URK8 271 aa12.79□□□□□ -0.36
CTDSP1-201ENST00000273062 BOD1L2Q8IYS8 172 aa12.79□□□□□ -0.36
CTDSP1-201ENST00000273062 ZNF645Q8N7E2 425 aa12.79□□□□□ -0.36
CTDSP1-201ENST00000273062 NKX2-8O15522 239 aa12.79□□□□□ -0.36
CTDSP1-201ENST00000273062 CACNG8Q8WXS5 425 aa12.79□□□□□ -0.36
CTDSP1-201ENST00000273062 SRSF8Q9BRL6 282 aaKnown RBP12.79□□□□□ -0.36
CTDSP1-201ENST00000273062 HSPB8Q9UJY1 196 aa12.79□□□□□ -0.36
CTDSP1-201ENST00000273062 TRAPPC2LQ9UL33 140 aa12.79□□□□□ -0.36
CTDSP1-201ENST00000273062 HEATR1Q9H583 2144 aaKnown RBP12.79□□□□□ -0.36
CTDSP1-201ENST00000273062 ZNF503-AS2A6NEH8 195 aa12.78□□□□□ -0.36
CTDSP1-201ENST00000273062 MT-ATP8P03928 68 aa12.78□□□□□ -0.36
CTDSP1-201ENST00000273062 TIMM23BQ5SRD1 257 aa12.78□□□□□ -0.36
CTDSP1-201ENST00000273062 H3BMG7 143 aa12.78□□□□□ -0.36
CTDSP1-201ENST00000273062 WISP2O76076 250 aa12.78□□□□□ -0.36
CTDSP1-201ENST00000273062 SRSF6Q13247 344 aaKnown RBP12.78□□□□□ -0.36
CTDSP1-201ENST00000273062 AMTNQ6UX39 209 aa12.78□□□□□ -0.36
CTDSP1-201ENST00000273062 MKXQ8IYA7 352 aa12.78□□□□□ -0.36
CTDSP1-201ENST00000273062 SGK494Q96LW2 274 aa12.78□□□□□ -0.36
CTDSP1-201ENST00000273062 MBNL3Q9NUK0 354 aaKnown RBP12.78□□□□□ -0.36
CTDSP1-201ENST00000273062 LINC00473A8K010 186 aa12.77□□□□□ -0.36
CTDSP1-201ENST00000273062 TNFRSF13BO14836 293 aaPredicted RBP12.77□□□□□ -0.36
CTDSP1-201ENST00000273062 PLGLB1Q02325 96 aa12.77□□□□□ -0.36
CTDSP1-201ENST00000273062 ZNF418Q8TF45 676 aaPredicted RBP12.77□□□□□ -0.36
CTDSP1-201ENST00000273062 GRAMD2BQ96HH9 432 aa12.77□□□□□ -0.36
CTDSP1-201ENST00000273062 FNDC10F2Z333 226 aa12.77□□□□□ -0.37
CTDSP1-201ENST00000273062 SMAD7O15105 426 aaKnown RBP12.77□□□□□ -0.37
CTDSP1-201ENST00000273062 MRPL33O75394 65 aaKnown RBP12.77□□□□□ -0.37
CTDSP1-201ENST00000273062 CCNOP22674 350 aa12.77□□□□□ -0.37
CTDSP1-201ENST00000273062 KRTAP27-1Q3LI81 207 aa12.77□□□□□ -0.37
CTDSP1-201ENST00000273062 VKORC1L1Q8N0U8 176 aa12.77□□□□□ -0.37
CTDSP1-201ENST00000273062 OR4A16Q8NH70 328 aa12.77□□□□□ -0.37
CTDSP1-201ENST00000273062 ADTRPQ96IZ2 230 aa12.77□□□□□ -0.37
CTDSP1-201ENST00000273062 PRR33A8MZF0 331 aa12.76□□□□□ -0.37
CTDSP1-201ENST00000273062 OR11H12B2RN74 326 aa12.76□□□□□ -0.37
CTDSP1-201ENST00000273062 J3QR89 54 aa12.76□□□□□ -0.37
CTDSP1-201ENST00000273062 MGST3O14880 152 aa12.76□□□□□ -0.37
CTDSP1-201ENST00000273062 EIF4EBP1Q13541 118 aaPredicted RBP12.76□□□□□ -0.37
CTDSP1-201ENST00000273062 FHL3Q13643 280 aa12.76□□□□□ -0.37
CTDSP1-201ENST00000273062 C8orf86Q6ZUL3 223 aa12.76□□□□□ -0.37
CTDSP1-201ENST00000273062 OR11H1Q8NG94 326 aa12.76□□□□□ -0.37
CTDSP1-201ENST00000273062 OR11H2Q8NH07 326 aa12.76□□□□□ -0.37
CTDSP1-201ENST00000273062 DOCK7Q96N67 2140 aa12.76□□□□□ -0.37
CTDSP1-201ENST00000273062 HSD17B10Q99714 261 aaKnown RBP12.76□□□□□ -0.37
CTDSP1-201ENST00000273062 ZNF747Q9BV97 191 aa12.76□□□□□ -0.37
CTDSP1-201ENST00000273062 KLF13Q9Y2Y9 288 aaPredicted RBP12.76□□□□□ -0.37
CTDSP1-201ENST00000273062 TRBV7-9A0A0J9YWB2 115 aa12.76□□□□□ -0.37
CTDSP1-201ENST00000273062 OR5AL1P0C617 328 aa12.76□□□□□ -0.37
CTDSP1-201ENST00000273062 SPINK8P0C7L1 97 aa12.76□□□□□ -0.37
CTDSP1-201ENST00000273062 GCSHP23434 173 aa12.76□□□□□ -0.37
CTDSP1-201ENST00000273062 PPIFP30405 207 aaKnown RBP12.76□□□□□ -0.37
CTDSP1-201ENST00000273062 MEOX1P50221 254 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms