RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 IGHV1-46P01743 117 aa13.8□□□□□ -0.2
SPG7-201ENST00000268704 REG1AP05451 166 aa13.8□□□□□ -0.2
SPG7-201ENST00000268704 CCL3L1P16619 93 aa13.8□□□□□ -0.2
SPG7-201ENST00000268704 Q56UQ5 140 aa13.8□□□□□ -0.2
SPG7-201ENST00000268704 RUSC1-AS1Q66K80 236 aa13.8□□□□□ -0.2
SPG7-201ENST00000268704 KIR3DL3Q8N743 410 aa13.8□□□□□ -0.2
SPG7-201ENST00000268704 OR1L8Q8NGR8 309 aa13.8□□□□□ -0.2
SPG7-201ENST00000268704 NPIPB3Q92617 1050 aa13.8□□□□□ -0.2
SPG7-201ENST00000268704 ZC2HC1AQ96GY0 325 aa13.8□□□□□ -0.2
SPG7-201ENST00000268704 LAMTOR2Q9Y2Q5 125 aa13.8□□□□□ -0.2
SPG7-201ENST00000268704 PLA2G2CQ5R387 149 aa13.8□□□□□ -0.2
SPG7-201ENST00000268704 RNASEKQ6P5S7 137 aaKnown RBP13.8□□□□□ -0.2
SPG7-201ENST00000268704 ZNF329Q86UD4 541 aa13.8□□□□□ -0.2
SPG7-201ENST00000268704 FAM222BQ8WU58 562 aa13.8□□□□□ -0.2
SPG7-201ENST00000268704 ATMQ13315 3056 aa13.8□□□□□ -0.2
SPG7-201ENST00000268704 GLRXP35754 106 aa13.79□□□□□ -0.2
SPG7-201ENST00000268704 WT1-ASQ06250 92 aa13.79□□□□□ -0.2
SPG7-201ENST00000268704 PMCHL1Q16048 86 aa13.79□□□□□ -0.2
SPG7-201ENST00000268704 EBLN2Q6P2I7 272 aa13.79□□□□□ -0.2
SPG7-201ENST00000268704 OR5B3Q8NH48 314 aa13.79□□□□□ -0.2
SPG7-201ENST00000268704 PAXXQ9BUH6 204 aa13.79□□□□□ -0.2
SPG7-201ENST00000268704 SPTBN2O15020 2390 aa13.79□□□□□ -0.2
SPG7-201ENST00000268704 PEX7O00628 323 aa13.79□□□□□ -0.2
SPG7-201ENST00000268704 NDUFA4L2Q9NRX3 87 aa13.79□□□□□ -0.2
SPG7-201ENST00000268704 BET1LQ9NYM9 111 aa13.79□□□□□ -0.2
SPG7-201ENST00000268704 SH2D7A6NKC9 451 aaPredicted RBP13.79□□□□□ -0.2
SPG7-201ENST00000268704 HIGD1CA8MV81 97 aa13.79□□□□□ -0.2
SPG7-201ENST00000268704 HSBP1O75506 76 aa13.79□□□□□ -0.2
SPG7-201ENST00000268704 CCL8P80075 99 aa13.79□□□□□ -0.2
SPG7-201ENST00000268704 SPATA12Q7Z6I5 190 aa13.79□□□□□ -0.2
SPG7-201ENST00000268704 PNKDQ8N490 385 aa13.79□□□□□ -0.2
SPG7-201ENST00000268704 BLNKQ8WV28 456 aa13.79□□□□□ -0.2
SPG7-201ENST00000268704 MBD6Q96DN6 1003 aa13.79□□□□□ -0.2
SPG7-201ENST00000268704 TACC2O95359 2948 aa13.78□□□□□ -0.2
SPG7-201ENST00000268704 H3BTX0 84 aa13.78□□□□□ -0.2
SPG7-201ENST00000268704 SAPCD1Q5SSQ6 148 aa13.78□□□□□ -0.2
SPG7-201ENST00000268704 C10orf113Q5VZT2 155 aa13.78□□□□□ -0.2
SPG7-201ENST00000268704 C19orf35Q6ZS72 473 aa13.78□□□□□ -0.2
SPG7-201ENST00000268704 ST6GALNAC6Q969X2 333 aa13.78□□□□□ -0.2
SPG7-201ENST00000268704 CSMD1Q96PZ7 3565 aa13.78□□□□□ -0.2
SPG7-201ENST00000268704 TRAV17A0A0B4J275 112 aa13.78□□□□□ -0.2
SPG7-201ENST00000268704 CGB1A6NKQ9 187 aa13.78□□□□□ -0.2
SPG7-201ENST00000268704 M0R2Z0 102 aa13.78□□□□□ -0.2
SPG7-201ENST00000268704 APELAP0DMC3 54 aa13.78□□□□□ -0.2
SPG7-201ENST00000268704 TBR1Q16650 682 aa13.78□□□□□ -0.2
SPG7-201ENST00000268704 COX19Q49B96 90 aa13.78□□□□□ -0.2
SPG7-201ENST00000268704 ZNF788Q6ZQV5 615 aa13.78□□□□□ -0.2
SPG7-201ENST00000268704 ALKBH7Q9BT30 221 aaPredicted RBP13.78□□□□□ -0.2
SPG7-201ENST00000268704 C19orf24Q9BVV8 132 aa13.78□□□□□ -0.2
SPG7-201ENST00000268704 MRPL32Q9BYC8 188 aaKnown RBP13.78□□□□□ -0.2
SPG7-201ENST00000268704 CLEC5AQ9NY25 188 aa13.78□□□□□ -0.2
SPG7-201ENST00000268704 ZZEF1O43149 2961 aa13.78□□□□□ -0.2
SPG7-201ENST00000268704 IGLV3-9A0A075B6K5 115 aa13.77□□□□□ -0.2
SPG7-201ENST00000268704 MOSP00540 346 aa13.77□□□□□ -0.2
SPG7-201ENST00000268704 VPS25Q9BRG1 176 aa13.77□□□□□ -0.2
SPG7-201ENST00000268704 RAB9BQ9NP90 201 aa13.77□□□□□ -0.2
SPG7-201ENST00000268704 IGKV1D-37A0A075B6S9 117 aa13.77□□□□□ -0.21
SPG7-201ENST00000268704 FAM181BA6NEQ2 426 aa13.77□□□□□ -0.21
SPG7-201ENST00000268704 SELENOVP59797 346 aa13.77□□□□□ -0.21
SPG7-201ENST00000268704 TCF24Q7RTU0 167 aa13.77□□□□□ -0.21
SPG7-201ENST00000268704 OR2D3Q8NGH3 330 aa13.77□□□□□ -0.21
SPG7-201ENST00000268704 TPSG1Q9NRR2 321 aa13.77□□□□□ -0.21
SPG7-201ENST00000268704 TNFRSF19Q9NS68 423 aa13.77□□□□□ -0.21
SPG7-201ENST00000268704 H0YJW9 148 aa13.77□□□□□ -0.21
SPG7-201ENST00000268704 BPIFB3P59826 476 aa13.77□□□□□ -0.21
SPG7-201ENST00000268704 FXYD5Q96DB9 178 aa13.77□□□□□ -0.21
SPG7-201ENST00000268704 ZNF714Q96N38 554 aa13.77□□□□□ -0.21
SPG7-201ENST00000268704 PCNX1Q96RV3 2341 aa13.76□□□□□ -0.21
SPG7-201ENST00000268704 LOC105371242A0A075B767 164 aa13.76□□□□□ -0.21
SPG7-201ENST00000268704 FCN3O75636 299 aa13.76□□□□□ -0.21
SPG7-201ENST00000268704 TSPOP30536 169 aa13.76□□□□□ -0.21
SPG7-201ENST00000268704 ERHP84090 104 aaKnown RBP13.76□□□□□ -0.21
SPG7-201ENST00000268704 IGHV3-21A0A0B4J1V1 117 aa13.76□□□□□ -0.21
SPG7-201ENST00000268704 ORM2P19652 201 aa13.76□□□□□ -0.21
SPG7-201ENST00000268704 GATA4P43694 442 aa13.76□□□□□ -0.21
SPG7-201ENST00000268704 FOXA3P55318 350 aaPredicted RBP13.76□□□□□ -0.21
SPG7-201ENST00000268704 DEFB109BQ30KR1 87 aa13.76□□□□□ -0.21
SPG7-201ENST00000268704 LINC00322Q6ZN03 302 aaPredicted RBP13.76□□□□□ -0.21
SPG7-201ENST00000268704 ZNF833PQ6ZTB9 187 aa13.76□□□□□ -0.21
SPG7-201ENST00000268704 LINC00305Q7Z4B0 112 aa13.76□□□□□ -0.21
SPG7-201ENST00000268704 PRB4P10163 310 aaPredicted RBP13.75□□□□□ -0.21
SPG7-201ENST00000268704 TIMM23BQ5SRD1 257 aa13.75□□□□□ -0.21
SPG7-201ENST00000268704 MUC6Q6W4X9 2439 aa13.75□□□□□ -0.21
SPG7-201ENST00000268704 FAM27E3Q08E93 113 aa13.75□□□□□ -0.21
SPG7-201ENST00000268704 GRAMD2BQ96HH9 432 aa13.75□□□□□ -0.21
SPG7-201ENST00000268704 NCOR1P1Q9H4R4 102 aa13.75□□□□□ -0.21
SPG7-201ENST00000268704 MRPL27Q9P0M9 148 aaKnown RBP13.75□□□□□ -0.21
SPG7-201ENST00000268704 FSTL3O95633 263 aa13.75□□□□□ -0.21
SPG7-201ENST00000268704 APOA2P02652 100 aa13.75□□□□□ -0.21
SPG7-201ENST00000268704 FAM169BQ8N8A8 192 aa13.75□□□□□ -0.21
SPG7-201ENST00000268704 OR4C5Q8NGB2 326 aa13.75□□□□□ -0.21
SPG7-201ENST00000268704 WIPF2Q8TF74 440 aaPredicted RBP13.75□□□□□ -0.21
SPG7-201ENST00000268704 URB1-AS1Q96HZ7 61 aa13.75□□□□□ -0.21
SPG7-201ENST00000268704 RITA1Q96K30 269 aa13.75□□□□□ -0.21
SPG7-201ENST00000268704 ZNF430Q9H8G1 570 aaPredicted RBP13.75□□□□□ -0.21
SPG7-201ENST00000268704 NKX6-3A6NJ46 265 aa13.74□□□□□ -0.21
SPG7-201ENST00000268704 CRYABP02511 175 aaKnown RBP13.74□□□□□ -0.21
SPG7-201ENST00000268704 IGLL1P15814 213 aa13.74□□□□□ -0.21
SPG7-201ENST00000268704 OSR1Q8TAX0 266 aaPredicted RBP13.74□□□□□ -0.21
SPG7-201ENST00000268704 CACNG8Q8WXS5 425 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms